View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14159_low_7 (Length: 375)

Name: NF14159_low_7
Description: NF14159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14159_low_7
NF14159_low_7
[»] chr6 (53 HSPs)
chr6 (1-344)||(27716459-27716804)
chr6 (1-360)||(27680839-27681201)
chr6 (1-360)||(27609063-27609425)
chr6 (1-360)||(27696534-27696894)
chr6 (5-216)||(26804348-26804559)
chr6 (1-216)||(26648310-26648525)
chr6 (1-216)||(26754278-26754493)
chr6 (1-216)||(31286430-31286645)
chr6 (4-216)||(27704334-27704546)
chr6 (1-211)||(27675702-27675912)
chr6 (1-209)||(26625101-26625309)
chr6 (1-209)||(26731078-26731286)
chr6 (1-211)||(27591105-27591315)
chr6 (1-216)||(28794236-28794451)
chr6 (1-216)||(28788115-28788330)
chr6 (22-216)||(26657870-26658064)
chr6 (22-216)||(26763841-26764035)
chr6 (208-360)||(26648546-26648699)
chr6 (208-360)||(26754514-26754667)
chr6 (46-211)||(26885992-26886157)
chr6 (214-360)||(26625343-26625487)
chr6 (214-360)||(26731320-26731464)
chr6 (46-216)||(26863516-26863686)
chr6 (239-360)||(27590926-27591047)
chr6 (239-360)||(27675523-27675644)
chr6 (48-160)||(27663347-27663459)
chr6 (216-360)||(28794480-28794626)
chr6 (46-216)||(27602795-27602965)
chr6 (216-360)||(28788359-28788505)
chr6 (46-160)||(27216377-27216491)
chr6 (239-360)||(27704160-27704281)
chr6 (290-360)||(31286723-31286793)
chr6 (46-155)||(26813416-26813525)
chr6 (34-154)||(26850568-26850688)
chr6 (35-162)||(26960983-26961110)
chr6 (219-360)||(26804591-26804733)
chr6 (298-360)||(26863763-26863825)
chr6 (1-140)||(27425775-27425914)
chr6 (46-216)||(26825738-26825908)
chr6 (300-360)||(27529218-27529278)
chr6 (46-140)||(27529454-27529548)
chr6 (34-138)||(26979299-26979406)
chr6 (49-107)||(26938962-26939020)
chr6 (1-84)||(25491522-25491605)
chr6 (298-360)||(26886261-26886323)
chr6 (208-262)||(31286666-31286720)
chr6 (57-98)||(25484978-25485019)
chr6 (303-360)||(25547128-25547185)
chr6 (303-360)||(26658139-26658196)
chr6 (303-360)||(26764110-26764167)
chr6 (57-93)||(25512809-25512845)
chr6 (57-93)||(26144787-26144823)
chr6 (298-334)||(26825978-26826014)
[»] chr8 (3 HSPs)
chr8 (1-344)||(29271798-29272143)
chr8 (118-217)||(22023221-22023320)
chr8 (297-336)||(22023430-22023469)
[»] scaffold0349 (1 HSPs)
scaffold0349 (111-344)||(15251-15486)
[»] scaffold0277 (4 HSPs)
scaffold0277 (34-216)||(11773-11955)
scaffold0277 (34-216)||(2810-2992)
scaffold0277 (241-360)||(11597-11716)
scaffold0277 (223-360)||(2634-2773)
[»] scaffold0419 (2 HSPs)
scaffold0419 (34-216)||(9394-9576)
scaffold0419 (223-360)||(9613-9752)
[»] chr1 (4 HSPs)
chr1 (214-360)||(266274-266418)
chr1 (1-160)||(266501-266660)
chr1 (22-216)||(28125771-28125965)
chr1 (298-360)||(28125636-28125698)
[»] scaffold1870 (2 HSPs)
scaffold1870 (34-151)||(675-792)
scaffold1870 (223-360)||(894-1033)
[»] chr2 (2 HSPs)
chr2 (1-216)||(17991301-17991516)
chr2 (303-363)||(17991159-17991219)
[»] chr4 (13 HSPs)
chr4 (46-216)||(18677713-18677883)
chr4 (46-216)||(18697555-18697725)
chr4 (46-216)||(18653631-18653801)
chr4 (46-216)||(18729649-18729819)
chr4 (208-360)||(18653457-18653610)
chr4 (46-216)||(18722227-18722397)
chr4 (208-360)||(18677539-18677692)
chr4 (46-216)||(18687767-18687937)
chr4 (1-140)||(18075641-18075780)
chr4 (208-360)||(18729475-18729628)
chr4 (208-360)||(18687594-18687746)
chr4 (208-360)||(18722053-18722206)
chr4 (262-360)||(18697382-18697481)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-140)||(61449-61588)


Alignment Details
Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 27716804 - 27716459
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716804 atatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 27716705  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    ||| ||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27716704 attgttctaaaggtctcaagtatcttccaagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgtcatctaggattttaaacaaggc 27716605  T
Q  201 aagtgaaataacttcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaag---tattagtctttgatttttagtttatttattctttctttc 297  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||| ||||||||    
T  27716604 aagtgaaataacttcacaatgattttgtttccgtcaacaaaa-aaatcagtatgaaagtaatattagtctttgatttttagtttatttattgtttctttc 27716506  T
Q  298 ttgtgtttatgcagaagttccaggatatgaaagtcttgatattggac 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27716505 ttgtgtttatgcagaagttccaggatatgaaagtcttgatattggac 27716459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 27680839 - 27681201
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27680839 atatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 27680938  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
     ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27680939 ttttttctggaggtctcaagtatcttccaagcagtttgcgtgtattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 27681038  T
Q  201 aagtgaaataacttcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaagtatta--gtctttgatttttagtttattta-ttctttctttc 297  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| |||||| | || |||||| |    
T  27681039 aagtgaaataacttcacaatgattttgtttcagtcaacaaaagaaatcagtatgaaagtattattgtctttgatttttaatttattgatttgtttcttcc 27681138  T
Q  298 ttgtgtttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||||| |||||||||||| ||| ||||||||||||||| ||||||| |||||||||||||||    
T  27681139 ttgtgtgtatgcagaagtttcagaatatgaaagtcttgacattggactattgtgaatatttaa 27681201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 27609425 - 27609063
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27609425 atatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 27609326  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27609325 atttttctggaggtctgaagtatcttccaagcagtttgcgtgtattgaaatggaaaggatgtttatcgaagtgtctgtcatctaatattttaaacaaggc 27609226  T
Q  201 aagtgaaataacttcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaagtatta--gtctttgatttttagtttattta-ttctttctttc 297  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| ||||| |||||| | || |||||| |    
T  27609225 aagtgaaataacttcacaatgattttgtttcagtcaacaaaagaaatcagtatgaaagtattattgtctttgagttttaatttattgatttgtttcttcc 27609126  T
Q  298 ttgtgtttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||||| |||||||||||| ||| ||||||||||||||| |||| || |||||||||||||||    
T  27609125 ttgtgtgtatgcagaagtttcagaatatgaaagtcttgacattgaactattgtgaatatttaa 27609063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 27696894 - 27696534
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  27696894 atatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactcaaaacagttatcattgaaaatggcc 27696795  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    ||||||||| |||||||||| |||| ||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  27696794 atttttctgaaggtctcaagcatctaccaagaagtttgagtgtattgaaatggaagggatgtttatcgaagtgtctgtcaactagtattttaaacaaggc 27696695  T
Q  201 aagtgaaataacttcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaag---tattagtctttgatttttagtttatttattctttctttc 297  Q
    ||||||||||||||  || | |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||    
T  27696694 aagtgaaataactt--cagttattttgtttccgtcaacaaaagaaatcagtatgaaagtaatattagtctttgatttttagtttatttattgtttctttc 27696597  T
Q  298 ttgtgtttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||    
T  27696596 ttgtgtttatgcagaagttccagaatatgaaaatcttgacattggacgattgtgaatatttaa 27696534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 26804348 - 26804559
Alignment:
Q  5 atatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccattt 104  Q
    |||||||| |||| |||||||||||| | |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  26804348 atatgaatttccactccatggaatccgtaatagaccagaaaggaaaggccttcaaaaagatgacaaaactgagaacacttatcattgaaaatggacattt 26804447  T
Q  105 ttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagt 204  Q
    ||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  26804448 ttctgaaggtctcaagtatcttccaagcagtttgatagtattgaaatggaaaggatgtttatcggagtctctatcatctagtattttaagcaaggcaagt 26804547  T
Q  205 gaaataacttca 216  Q
    ||||||||||||    
T  26804548 gaaataacttca 26804559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 26648310 - 26648525
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| |||| |||||||||||| | |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  26648310 atatatatgaatttccactccatggaatccgtaatagaccagaaaggaaaggccttcaagaagatgacaaaactcaaaacacttatcattgaaaatggtc 26648409  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    ||||||||  |||||| || ||||||||||||||||||||  |||||||||||||||||||||||||  ||| ||| |||||||||||||||| ||||||    
T  26648410 atttttctaaaggtcttaaatatcttccaagcagtttgagagtattgaaatggaaaggatgtttatcagagtctctatcatctagtattttaagcaaggc 26648509  T
Q  201 aagtgaaataacttca 216  Q
    |||| | |||||||||    
T  26648510 aagttatataacttca 26648525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 26754278 - 26754493
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| |||| |||||||||||| | |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  26754278 atatatatgaatttccactccatggaatccgtaatagaccagaaaggaaaggccttcaagaagatgacaaaactcaaaacacttatcattgaaaatggtc 26754377  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    ||||||||  |||||| || ||||||||||||||||||||  |||||||||||||||||||||||||  ||| ||| |||||||||||||||| ||||||    
T  26754378 atttttctaaaggtcttaaatatcttccaagcagtttgagagtattgaaatggaaaggatgtttatcagagtctctatcatctagtattttaagcaaggc 26754477  T
Q  201 aagtgaaataacttca 216  Q
    |||| | |||||||||    
T  26754478 aagttatataacttca 26754493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 31286430 - 31286645
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| |||| |||||||||||| | |||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  31286430 atatatatgaatttccactccatggaatccgtaatagaccagaaaggaatggccttcaagaagatgacaaaacttaaaacactaatcattgaaaatggcc 31286529  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    |||||||    || |||||||||||||||| |||||||||  |||||||||||||||||||||||| | ||| ||| |||||||||||||||| ||||||    
T  31286530 atttttccaatggactcaagtatcttccaaacagtttgagagtattgaaatggaaaggatgtttattggagtctctatcatctagtattttaagcaaggc 31286629  T
Q  201 aagtgaaataacttca 216  Q
    ||||||| ||||||||    
T  31286630 aagtgaagtaacttca 31286645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 27704546 - 27704334
Alignment:
Q  4 tatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatt 103  Q
    ||||||||| | || |||||||||||||| |||||| | ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  27704546 tatatgaattttcactccatggaatccataatagaccaaaaaggaatggccttcaagaagatgacaagattgaaaacacttatcattgaaaatggccatt 27704447  T
Q  104 tttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaag 203  Q
     ||||  |||||||||||||||||||||||||||||    |||||||||| ||||||||||||| |||| ||| || ||||||||||||| |||||||||    
T  27704446 gttctaaaggtctcaagtatcttccaagcagtttgaaagcattgaaatgggaaggatgtttatcaaagtctctatcgtctagtattttaagcaaggcaag 27704347  T
Q  204 tgaaataacttca 216  Q
    |||||||||||||    
T  27704346 tgaaataacttca 27704334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 27675912 - 27675702
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||| ||||||| | || |||||||||||| | |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  27675912 atatgtatgaatttgcactccatggaatccgtaatagacaagaaaggaaaggccttcaaaaagatgacaagattgaaaacacttatcattgaaaatggcc 27675813  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    ||| ||||  |||||||||| ||||||||||||||||||    |||||||||| ||||||||||||| |||| ||| || ||||||||||||| ||||||    
T  27675812 attgttctaaaggtctcaagcatcttccaagcagtttgaaagcattgaaatgggaaggatgtttatcaaagtctctctcgtctagtattttaagcaaggc 27675713  T
Q  201 aagtgaaataa 211  Q
    |||||||||||    
T  27675712 aagtgaaataa 27675702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 26625101 - 26625309
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| | |  || ||||||||| | |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| |    
T  26625101 atatatatgaattttccctctatggaatccgtaatagaccagaaaggaaaggccttcaggaagatgacaaaactcaaaacacttatcattgaagatggtc 26625200  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
      ||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||| ||| ||||| |||| ||||||||    
T  26625201 ggttttctaaaggtctcaagtatcttccaagcagtttgagagtattgaaatggaaaggatgtttatcggagtctctatcagctagttttttgaacaaggc 26625300  T
Q  201 aagtgaaat 209  Q
    |||||||||    
T  26625301 aagtgaaat 26625309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 26731078 - 26731286
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| | |  || ||||||||| | |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| |    
T  26731078 atatatatgaattttccctctatggaatccgtaatagaccagaaaggaaaggccttcaggaagatgacaaaactcaaaacacttatcattgaagatggtc 26731177  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
      ||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||| ||| ||||| |||| ||||||||    
T  26731178 ggttttctaaaggtctcaagtatcttccaagcagtttgagagtattgaaatggaaaggatgtttatcggagtctctatcagctagttttttgaacaaggc 26731277  T
Q  201 aagtgaaat 209  Q
    |||||||||    
T  26731278 aagtgaaat 26731286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 27591315 - 27591105
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||| ||||||| | || || ||||||||  | |||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||    
T  27591315 atatgtatgaatttgcactctatggaatctgtaatagacaagaaaggaaaggccttcaaaaagatgacaagattgaaaacacttattattgaaaatggcc 27591216  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    ||| ||||  ||||||||||||||||| |||||||||||    |||||||||| ||||||||||||| |||| ||| || ||||||||||||| ||||||    
T  27591215 attgttctaaaggtctcaagtatcttcgaagcagtttgaaagcattgaaatgggaaggatgtttatcaaagtctctatcgtctagtattttaagcaaggc 27591116  T
Q  201 aagtgaaataa 211  Q
    |||||||||||    
T  27591115 aagtgaaataa 27591105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 28794236 - 28794451
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| |||  |||  ||||||| | ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  28794236 atatatatgaatttcccctccgaggaatccgtaatagacaagaaaggaaaggccttcaagaagatgacaagattgaaaacgcttatcattgaaaatggcc 28794335  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    ||||||||  ||||||||| ||||||||||| ||||||||  |||||||||     |||||||||||  ||| ||||| ||| |||| ||||| ||||||    
T  28794336 atttttctaaaggtctcaactatcttccaagtagtttgagagtattgaaattacgtggatgtttatcagagtctctgttatcaagtagtttaagcaaggc 28794435  T
Q  201 aagtgaaataacttca 216  Q
    ||||||||||||||||    
T  28794436 aagtgaaataacttca 28794451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 28788115 - 28788330
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| |||  |||  ||||||| | ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  28788115 atatatatgaatttcccctccgaggaatccgtaatagacaagaaaggaaaggccttcaagaagatgacaagattgaaaacgcttatcattgaaaatggcc 28788214  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    ||||||||  ||||||||| ||||||||||| ||||||||  |||||||||     |||||||||||  ||| ||| | |||  ||| ||||| ||||||    
T  28788215 atttttctaaaggtctcaactatcttccaagtagtttgagagtattgaaattacgtggatgtttatcagagtctcttttatcatgtagtttaagcaaggc 28788314  T
Q  201 aagtgaaataacttca 216  Q
    ||||||||||||||||    
T  28788315 aagtgaaataacttca 28788330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 26657870 - 26658064
Alignment:
Q  22 atggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagt 121  Q
    |||||| |||| ||||||  ||| |||||| |||||| |||||||||||| || ||||| ||||||||||||||||||| |||||||  |||||  ||      
T  26657870 atggaaaccataatagactggaatggaaagcccttcaggaagatgacaaatctcaaaactcttatcattgaaaatggccgtttttctaaaggtccaaaac 26657969  T
Q  122 atcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||||||| ||||||||  | ||||||||||||||||||   ||||||| ||| |||||| |||||| |||||||||||||||||||| ||||    
T  26657970 atcttccaagtagtttgagatttttgaaatggaaaggatgtccttcgaagtctctatcatcttgtatttcaaacaaggcaagtgaaataagttca 26658064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 26763841 - 26764035
Alignment:
Q  22 atggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagt 121  Q
    |||||| |||| ||||||  ||| |||||| |||||| |||||||||||| || ||||| ||||||||||||||||||| |||||||  |||||  ||      
T  26763841 atggaaaccataatagactggaatggaaagcccttcaggaagatgacaaatctcaaaactcttatcattgaaaatggccgtttttctaaaggtccaaaac 26763940  T
Q  122 atcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||||||| ||||||||  | ||||||||||||||||||   ||||||| ||| |||||| |||||| |||||||||||||||||||| ||||    
T  26763941 atcttccaagtagtttgagatttttgaaatggaaaggatgtccttcgaagtctctatcatcttgtatttcaaacaaggcaagtgaaataagttca 26764035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 360
Target Start/End: Original strand, 26648546 - 26648699
Alignment:
Q  208 ataacttcacaatgattttgtttccgtcaacaaaag-aaatcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgttt 305  Q
    |||| ||||||||||||||||||||||||||||||  |||||| ||||| ||||| ||| ||||||||||| ||||||||||  ||| || |||||||||    
T  26648546 ataaattcacaatgattttgtttccgtcaacaaaaacaaatcactatgagagtat-agtgtttgatttttaatttatttatttgtttgttccttgtgttt 26648644  T
Q  306 atgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||||||||||| ||||||||||||||| |||| ||  ||||||||||||||    
T  26648645 atgcagaagttccagaatatgaaagtcttgacattgaactgttgtgaatatttaa 26648699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 360
Target Start/End: Original strand, 26754514 - 26754667
Alignment:
Q  208 ataacttcacaatgattttgtttccgtcaacaaaag-aaatcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgttt 305  Q
    |||| ||||||||||||||||||||||||||||||  |||||| ||||| ||||| ||| ||||||||||| ||||||||||  ||| || |||||||||    
T  26754514 ataaattcacaatgattttgtttccgtcaacaaaaacaaatcactatgagagtat-agtgtttgatttttaatttatttatttgtttgttccttgtgttt 26754612  T
Q  306 atgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||||||||||| ||||||||||||||| |||| ||  ||||||||||||||    
T  26754613 atgcagaagttccagaatatgaaagtcttgacattgaactgttgtgaatatttaa 26754667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 26885992 - 26886157
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||   |||||  |||||||||||||  ||||||||  |||    
T  26885992 ggaaagtccttcaagaagatgacaaaactcaaaactcttatcattgaaaatggccatttttccaaaggtccgaagtatcttccaaatagtttgagagtat 26886091  T
Q  146 tgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataa 211  Q
    | |||||||||||||||   ||  ||| ||| |||||||||||||| | |||||||||| ||||||    
T  26886092 ttaaatggaaaggatgtacttcagagtctctatcatctagtatttttagcaaggcaagtaaaataa 26886157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 26625343 - 26625487
Alignment:
Q  214 tcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaagtattagtctttgatttttagtttatttattctttctttcttgtgtttatgcagaa 313  Q
    |||||||||||||||||  ||||||||| ||| ||| ||||| ||||| ||| ||||||||||| |||||||||| |||||| |||||||||||||||||    
T  26625343 tcacaatgattttgtttatgtcaacaaa-gaagtcactatgagagtat-agtgtttgatttttaatttatttattgtttcttccttgtgtttatgcagaa 26625440  T
Q  314 gttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||| |||||||||| || | ||||||||| |||||| ||||||    
T  26625441 gttccagaatatgaaagtattaacattggacgaatgtgaacatttaa 26625487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 26731320 - 26731464
Alignment:
Q  214 tcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaagtattagtctttgatttttagtttatttattctttctttcttgtgtttatgcagaa 313  Q
    |||||||||||||||||  ||||||||| ||| ||| ||||| ||||| ||| ||||||||||| |||||||||| |||||| |||||||||||||||||    
T  26731320 tcacaatgattttgtttatgtcaacaaa-gaagtcactatgagagtat-agtgtttgatttttaatttatttattgtttcttccttgtgtttatgcagaa 26731417  T
Q  314 gttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||| |||||||||| || | ||||||||| |||||| ||||||    
T  26731418 gttccagaatatgaaagtattaacattggacgaatgtgaacatttaa 26731464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 26863516 - 26863686
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||  ||||| ||| || ||| ||||  |||||||  |||    
T  26863516 ggaaaggccttcaagaagatgaaaaaactcaaaacacttgtcattgaaaatggccatttttctaaaggtcccaaatacctttcaagttgtttgagagtat 26863615  T
Q  146 tgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    | ||||||||||||| |   || |||| ||| |||||| || |||| |||||||||||||| |||| ||||    
T  26863616 taaaatggaaaggatatccttccaagtctctatcatcttgttttttgaacaaggcaagtgatataatttca 26863686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 27591047 - 27590926
Alignment:
Q  239 aaaagaaatcagtatgaaagtattagtctttgatttttagtttatttattctttctttctt-gtgtttatgcagaagttccaggatatgaaagtcttgat 337  Q
    ||||||||||| ||||||||||| ||| |||| |||||| |||||||||  |||||| ||| |||||||||||||||||||||||||||| | |||||||    
T  27591047 aaaagaaatcactatgaaagtat-agtgtttgctttttaatttatttatagtttcttcctttgtgtttatgcagaagttccaggatatgacaatcttgat 27590949  T
Q  338 attggacgattgtgaatatttaa 360  Q
    ||||||| |||||||||||||||    
T  27590948 attggaccattgtgaatatttaa 27590926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 27675644 - 27675523
Alignment:
Q  239 aaaagaaatcagtatgaaagtattagtctttgatttttagtttatttattctttctttctt-gtgtttatgcagaagttccaggatatgaaagtcttgat 337  Q
    ||||||||||| ||||||||||| ||| |||| |||||| |||||||||  |||||| ||| |||||||||||||||||||||||||||| | |||||||    
T  27675644 aaaagaaatcactatgaaagtat-agtgtttgctttttaatttatttatagtttcttcctttgtgtttatgcagaagttccaggatatgacaatcttgat 27675546  T
Q  338 attggacgattgtgaatatttaa 360  Q
    ||||||| |||||||||||||||    
T  27675545 attggaccattgtgaatatttaa 27675523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 27663459 - 27663347
Alignment:
Q  48 aaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatattg 147  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||  |||||||   |||||    
T  27663459 aaaggcctttaagaagatgaaaaaactcaaaacacttatcattgaaaagggctatttttctaaaggtctcaagtatcttccaaaaagtttgatagtattg 27663360  T
Q  148 aaatggaaaggat 160  Q
    |||||||||||||    
T  27663359 aaatggaaaggat 27663347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 360
Target Start/End: Original strand, 28794480 - 28794626
Alignment:
Q  216 acaatgattttgtttccgtcaacaaa--agaaatcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgtttatgcaga 312  Q
    ||||||||||||||| || |||||||  |||||||| ||||| ||||| ||| ||| ||||||| ||||||||||  |||||| ||||||||||||||||    
T  28794480 acaatgattttgttttcgccaacaaagaagaaatcactatgatagtat-agtgtttaatttttaatttatttatttgtttcttccttgtgtttatgcaga 28794578  T
Q  313 agttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||||||| | ||||||||||||| ||||||| | |||||||||||||    
T  28794579 agttccagaacatgaaagtcttgacattggacaagtgtgaatatttaa 28794626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 27602965 - 27602795
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    ||||||||| | |||||||||||||| || ||||||||||||||||||||||| || |||||| ||||||   | ||||||||||| |||||||| || |    
T  27602965 ggaaaggccatgaagaagatgacaaatctcaaaacacttatcattgaaaatggtcagttttctagaggtcctgactatcttccaagtagtttgag-attt 27602867  T
Q  146 tg-aaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    || |||||||| || |||   ||||||| ||| |||||| ||||||| ||||||||||||||||||| ||||    
T  27602866 tgcaaatggaatggttgtccttcgaagtctctatcatcttgtattttgaacaaggcaagtgaaataaattca 27602795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 360
Target Start/End: Original strand, 28788359 - 28788505
Alignment:
Q  216 acaatgattttgtttccgtcaacaaa--agaaatcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgtttatgcaga 312  Q
    ||||||||||||||| || |||||||  |||||||| ||||| ||||| ||| ||| ||||||| ||||||||||  |||||| ||||||||||||||||    
T  28788359 acaatgattttgttttcgccaacaaagaagaaatcactatgatagtat-agtgtttaatttttaatttatttatttgtttcttccttgtgtttatgcaga 28788457  T
Q  313 agttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    | |||||| | ||||||||||||| ||||||| | |||||||||||||    
T  28788458 atttccagaacatgaaagtcttgacattggacaagtgtgaatatttaa 28788505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 27216377 - 27216491
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    ||||||||||||| |||||||| ||| || |||||| ||||||||||||||||||||||||||  ||||| ||| ||||||||||| ||||||||  | |    
T  27216377 ggaaaggccttcacgaagatgaaaaatctcaaaacatttatcattgaaaatggccatttttctaaaggtcccaattatcttccaagtagtttgagatttt 27216476  T
Q  146 tgaaatggaaaggat 160  Q
     ||||||||||||||    
T  27216477 ggaaatggaaaggat 27216491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 27704281 - 27704160
Alignment:
Q  239 aaaagaaatcagtatgaaagtattagtctttgatttttagtttatttattctttctttctt-gtgtttatgcagaagttccaggatatgaaagtcttgat 337  Q
    ||||||||||| ||||||||||| ||| |||| |||||| |||||||||  |||||| ||| ||||||||||||||||||| |||||||| ||||||||     
T  27704281 aaaagaaatcactatgaaagtat-agtgtttgctttttaatttatttatagtttcttcctttgtgtttatgcagaagttcccggatatgacagtcttgac 27704183  T
Q  338 attggacgattgtgaatatttaa 360  Q
    ||||||| ||||| |||||||||    
T  27704182 attggaccattgtaaatatttaa 27704160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 31286723 - 31286793
Alignment:
Q  290 tttctttcttgtgtttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  31286723 tttcttccttgtgtttacgcagaagttccagaatatgaaagtcttgacattggacgattgtgaatatttaa 31286793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 26813416 - 26813525
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||  ||||| |||| ||||||| || | ||||||  |||    
T  26813416 ggaaaggccttcaagaagatgacaaaactcaaaacacttattattgaaaatggtcaattttctaaaggtcccaagcatcttcctagtactttgagagtat 26813515  T
Q  146 tgaaatggaa 155  Q
    |||| |||||    
T  26813516 tgaagtggaa 26813525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 154
Target Start/End: Original strand, 26850568 - 26850688
Alignment:
Q  34 atagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagca 133  Q
    ||||||| ||| | |||||||||||||||||||||||| || |||||||||||| ||||| ||| | ||||||||  ||||| |||||||||||| || |    
T  26850568 atagacatgaatgaaaaggccttcaagaagatgacaaatctcaaaacacttatcgttgaagatgacaatttttctaaaggtcccaagtatcttccgagta 26850667  T
Q  134 gtttgagtatattgaaatgga 154  Q
    |||||||  ||||| ||||||    
T  26850668 gtttgagagtattggaatgga 26850688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 26960983 - 26961110
Alignment:
Q  35 tagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcag 134  Q
    |||||| ||| | |||||| ||||||||||||||||| || ||||||||||||||||| || ||| ||||||||  ||||| ||||||||||||||| ||    
T  26960983 tagacatgaatgaaaaggcattcaagaagatgacaaatctcaaaacacttatcattgagaaaggcaatttttctaaaggtcccaagtatcttccaagtag 26961082  T
Q  135 tttgagtatattg-aaatggaaaggatgt 162  Q
    |||| |||| ||| ||||||| |||||||    
T  26961083 tttg-gtattttgcaaatggataggatgt 26961110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 360
Target Start/End: Original strand, 26804591 - 26804733
Alignment:
Q  219 atgattttgtttccgtcaacaaaagaaat-cagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgtttatgcagaagtt 316  Q
    ||||||||||||| ||||||||||  ||| || ||||| |||||| || |||| |||| | ||||||||||  |||||| ||||||||||||||||| ||    
T  26804591 atgattttgtttctgtcaacaaaaacaattcactatgagagtatt-gtgtttggttttgaatttatttatttgtttcttccttgtgtttatgcagaattt 26804689  T
Q  317 ccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||  ||||||||||||||| ||||||||||  |||||||||||    
T  26804690 ccaaaatatgaaagtcttgacattggacgataatgaatatttaa 26804733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 26863763 - 26863825
Alignment:
Q  298 ttgtgtttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  26863763 ttgtgtttatgcagaagttcgagaatatgaaagtcttgatattggactattgtgaatatttaa 26863825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27425914 - 27425775
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| | || || ||||||||| | ||||||||||| |||||||||||||||||||||||| | || |||||  |||| | ||||||||||     
T  27425914 atatatatgaatttgcactctatggaatccgtaatagacaagaatggaaaggccttcaagaagatgacacacctcaaaacgtttattactgaaaatggct 27425815  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgag 140  Q
    ||  |  |  | ||||||||||||||||||| ||||||||    
T  27425814 atcatattcaaagtctcaagtatcttccaagaagtttgag 27425775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 26825738 - 26825908
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    |||||||| |||| |||||||||||| || ||||||||||| ||| |||| ||||||||||||  |||||   |||| || ||||| ||||||||  |||    
T  26825738 ggaaaggctttcatgaagatgacaaatctcaaaacacttattattaaaaagggccatttttctaaaggtccagagtacctcccaagtagtttgagagtat 26825837  T
Q  146 tgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||||| |  | | |   ||| | | ||| |||||||||||||| ||||||||||||||||||| ||||    
T  26825838 tgaaatgggataggtatccttcggattctctatcatctagtattttgaacaaggcaagtgaaataagttca 26825908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 27529278 - 27529218
Alignment:
Q  300 gtgtttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||||||||||||||||  | ||||||||||||||||||||| || |||||||||||||||    
T  27529278 gtgtttatgcagaagtttgaagatatgaaagtcttgatattgaacaattgtgaatatttaa 27529218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 27529548 - 27529454
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgag 140  Q
    ||||| |||||| ||||||||||||| || |||||| |||| | |||||||||||||  ||||  | ||||| ||||||||||||| ||||||||    
T  27529548 ggaaatgccttcgagaagatgacaaacctcaaaacatttattactgaaaatggccatcattctaaaagtctcgagtatcttccaagtagtttgag 27529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 26979299 - 26979406
Alignment:
Q  34 atagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaa---aatggccatttttctggaggtctcaagtatcttccaa 130  Q
    ||||||| ||| | |||||| ||||||||||||||||| || ||||||||||||||| ||    ||||| ||||||||  ||||| || |||||||||||    
T  26979299 atagacatgaatgaaaaggcattcaagaagatgacaaatctcaaaacacttatcattcaagctgatggcaatttttctaaaggtcccaggtatcttccaa 26979398  T
Q  131 gcagtttg 138  Q
    | ||||||    
T  26979399 gtagtttg 26979406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 26938962 - 26939020
Alignment:
Q  49 aaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttc 107  Q
    ||||||||||||||||||| ||| || ||||||||||||||| ||| ||| ||||||||    
T  26938962 aaggccttcaagaagatgaaaaatcttaaaacacttatcattaaaagtggtcatttttc 26939020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25491605 - 25491522
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacactt 84  Q
    |||||||||||| |||  |||||||||| |   ||||||  ||| ||| ||||||||||||||| ||||||||| |||||||||    
T  25491605 atatatatgaatttcccctccatggaattcgaaatagactggaatggagaggccttcaagaagacgacaaaactcaaaacactt 25491522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 26886261 - 26886323
Alignment:
Q  298 ttgtgtttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||||||||||||||||||| |    ||||||||||||| ||| ||| |||||||||||||||    
T  26886261 ttgtgtttatgcagaagttcgacttcatgaaagtcttgacatttgacaattgtgaatatttaa 26886323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 31286666 - 31286720
Alignment:
Q  208 ataacttcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaagtatt 262  Q
    |||| |||||||| ||||||||| |||||||||||||||||| || || ||||||    
T  31286666 ataaattcacaataattttgttttcgtcaacaaaagaaatcactaagagagtatt 31286720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 25484978 - 25485019
Alignment:
Q  57 caagaagatgacaaaactgaaaacacttatcattgaaaatgg 98  Q
    ||||||||||||||| || |||||||||||||||||| ||||    
T  25484978 caagaagatgacaaatctcaaaacacttatcattgaagatgg 25485019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 25547128 - 25547185
Alignment:
Q  303 tttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||||| ||||| |  ||||||||||||||||||||||   ||||||||||||||    
T  25547128 tttatgcaggagttcaactatatgaaagtcttgatattggatctttgtgaatatttaa 25547185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 26658139 - 26658196
Alignment:
Q  303 tttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||||| ||||| |  |||||||| || ||| |||||||||||||||||||||||    
T  26658139 tttatgcaggagttcaataatatgaaattcatgacattggacgattgtgaatatttaa 26658196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 26764110 - 26764167
Alignment:
Q  303 tttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||||| ||||| |  |||||||| || ||| |||||||||||||||||||||||    
T  26764110 tttatgcaggagttcaataatatgaaattcatgacattggacgattgtgaatatttaa 26764167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 25512809 - 25512845
Alignment:
Q  57 caagaagatgacaaaactgaaaacacttatcattgaa 93  Q
    ||||||||||||||| || ||||||||||||||||||    
T  25512809 caagaagatgacaaatctcaaaacacttatcattgaa 25512845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 26144787 - 26144823
Alignment:
Q  57 caagaagatgacaaaactgaaaacacttatcattgaa 93  Q
    ||||||||||||||| || ||||||||||||||||||    
T  26144787 caagaagatgacaaatctcaaaacacttatcattgaa 26144823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 26825978 - 26826014
Alignment:
Q  298 ttgtgtttatgcagaagttccaggatatgaaagtctt 334  Q
    |||||||||||||||||||| || |||||||||||||    
T  26825978 ttgtgtttatgcagaagttcgagaatatgaaagtctt 26826014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 29272143 - 29271798
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    ||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||    
T  29272143 atatatacgaatctccattccatagaatctgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactcaaaacagttatcttcgaaaatggcc 29272044  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    |||||||||||||||||||| || | ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29272043 atttttctggaggtctcaagcatttaccaagaagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 29271944  T
Q  201 aagtgaaataacttcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaagtat--tagtctttgatttttagtttatttattctttctttct 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  29271943 aagtgaaataacttcacaatgattttgtttccgtcaacaaaagaaatcactatgaaagtattatagtctttgatttttagtttatttattgtttctttct 29271844  T
Q  299 tgtgtttatgcagaagttccaggatatgaaagtcttgatattggac 344  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  29271843 tgtgtttatgcagaagtttcaggatatgaaagtcttgatattggac 29271798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 22023221 - 22023320
Alignment:
Q  118 aagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttcac 217  Q
    |||||| |||||||| || ||||| |||| ||||||||||||||||||||| ||| ||| |||||||||||||| | |||||||||||||||||||||||    
T  22023221 aagtattttccaagcggtctgagtgtattaaaatggaaaggatgtttatcggagtctctatcatctagtattttgagcaaggcaagtgaaataacttcac 22023320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 336
Target Start/End: Original strand, 22023430 - 22023469
Alignment:
Q  297 cttgtgtttatgcagaagttccaggatatgaaagtcttga 336  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  22023430 cttgtgtttatgcagaagttccagaatatgaaagtcttga 22023469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 111 - 344
Target Start/End: Original strand, 15251 - 15486
Alignment:
Q  111 aggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaata 210  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15251 aggtctcaagtatcttccaagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgtcatctaggattttaaacaaggcaagtgaaata 15350  T
Q  211 acttcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaag---tattagtctttgatttttagtttatttattctttctttcttgtgtttat 307  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15351 acttcacaatgattttgtttccgtcaacaaaa-aaatcagtatgaaagtaatattagtctttgatttttagtttatttattgtttctttcttgtgtttat 15449  T
Q  308 gcagaagttccaggatatgaaagtcttgatattggac 344  Q
    |||||||||||||||||||||||||||||||||||||    
T  15450 gcagaagttccaggatatgaaagtcttgatattggac 15486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 107; Significance: 1e-53; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 34 - 216
Target Start/End: Complemental strand, 11955 - 11773
Alignment:
Q  34 atagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagca 133  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11955 atagacaagaaaggaaaggccttcaagaagatgacaagactgaaaacgcttatcattgaaaatggccatttttctaaaggtctcaagtatcttccaagca 11856  T
Q  134 gtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||||  |||||||||   | |||||||||||  ||| ||| | |||  ||| ||||| ||||||||||||||||||||||    
T  11855 gtttgagagtattgaaattacatggatgtttatcagagtctctattatcatgtagtttaagcaaggcaagtgaaataacttca 11773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 216
Target Start/End: Complemental strand, 2992 - 2810
Alignment:
Q  34 atagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagca 133  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  2992 atagacaagaaaggaaaggccttcaagaagatgacaagactgaaaacgcttatcattgaaaatgtccatttttctaaaggtctcaagtatcttccaagca 2893  T
Q  134 gtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||||  |||||||||     |||||||||||  ||| ||| | |||  ||| ||||| ||||| ||||||||||||||||    
T  2892 gtttgagagtattgaaattacgtggatgtttatcagagtctctattatcatgtagtttaagcaaggtaagtgaaataacttca 2810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 360
Target Start/End: Complemental strand, 11716 - 11597
Alignment:
Q  241 aagaaatcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgtttatgcagaagttccaggatatgaaagtcttgatat 339  Q
    ||||||||| ||||| ||||| ||| ||| ||||||| ||||||||||  |||||| ||||||||||||||||| |||||| | ||||||||||||| ||    
T  11716 aagaaatcactatgatagtat-agtgtttaatttttaatttatttatttgtttcttccttgtgtttatgcagaatttccagaacatgaaagtcttgacat 11618  T
Q  340 tggacgattgtgaatatttaa 360  Q
    ||||| | |||||||||||||    
T  11617 tggacaagtgtgaatatttaa 11597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 360
Target Start/End: Complemental strand, 2773 - 2634
Alignment:
Q  223 ttttgtttccgtcaacaaa--agaaatcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgtttatgcagaagttcca 319  Q
    |||||||| || |||||||  |||||||  ||||| ||||| ||| ||| ||||||| || |||||||  |||||| |||||||||||||||||||||||    
T  2773 ttttgttttcgccaacaaagaagaaatcgctatgatagtat-agtgtttaatttttaattaatttatttgtttcttccttgtgtttatgcagaagttcca 2675  T
Q  320 ggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    | | |||||| |||||| |||||||   |||||||||||||    
T  2674 gaacatgaaaatcttgacattggacaggtgtgaatatttaa 2634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 216
Target Start/End: Original strand, 9394 - 9576
Alignment:
Q  34 atagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagca 133  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  9394 atagacaagaaaggaaaggccttcaagaagatgacaagactgaaaacgcttatcattgaaaatgtccatttttctaaaggtctcaagtatcttccaagca 9493  T
Q  134 gtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||||  |||||||||     |||||||||||  ||| ||| | |||  ||| ||||| ||||| ||||||||||||||||    
T  9494 gtttgagagtattgaaattacgtggatgtttatcagagtctctattatcatgtagtttaagcaaggtaagtgaaataacttca 9576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 360
Target Start/End: Original strand, 9613 - 9752
Alignment:
Q  223 ttttgtttccgtcaacaaa--agaaatcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgtttatgcagaagttcca 319  Q
    |||||||| || |||||||  |||||||  ||||| ||||| ||| ||| ||||||| ||||||||||  |||||| |||||||||||||||||||||||    
T  9613 ttttgttttcgccaacaaagaagaaatcgctatgatagtat-agtgtttaatttttaatttatttatttgtttcttccttgtgtttatgcagaagttcca 9711  T
Q  320 ggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    | | |||||| |||||| |||||||   |||||||||||||    
T  9712 gaacatgaaaatcttgacattggacaggtgtgaatatttaa 9752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 5e-44; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 214 - 360
Target Start/End: Complemental strand, 266418 - 266274
Alignment:
Q  214 tcacaatgattttgtttccgtcaacaaaagaaatcagtatgaaagtattagtctttgatttttagtttatttattctttctttcttgtgtttatgcagaa 313  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||| |||||  ||||||| |||||||||    
T  266418 tcacaatgattttgtttacgtcaacaaaaaaaatcactatgagagtat-agtctttgatttttagtttatttattgtttctc-cttgtgtgtatgcagaa 266321  T
Q  314 gttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  266320 gttccaggatatgaatgtcttgatattagaccattgtgaatatttaa 266274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 266660 - 266501
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| |||| || |||||| |  | |||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |    
T  266660 atatatatgaatttccactcgatggaacctgtaatagaccagaaaggaaaggccttcaagaagatgacaaatctcaaaacacttgtcattgaaaatgggc 266561  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggat 160  Q
    ||||||||  |||||| ||||| |||| |||||||||||   ||||||||||||||||||    
T  266560 atttttctaaaggtctgaagtaccttcgaagcagtttgaaagtattgaaatggaaaggat 266501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 28125965 - 28125771
Alignment:
Q  22 atggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagt 121  Q
    |||||| |||| ||||||  |||  |||| ||||||||||||||| |||| || ||||||||||| ||  ||||||| || || ||   | ||| |||||    
T  28125965 atggaacccataatagactggaatcgaaaagccttcaagaagatgtcaaatcttaaaacacttattataaaaaatggtcaattctccaaaagtcccaagt 28125866  T
Q  122 atcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||||||| | ||||||  |||||| |||| |||||| |    |||||| ||| ||||||||| |||| ||||||||||||||||||| ||||    
T  28125865 atcttccaagtactttgagagtattgatatgggaaggatataatgcgaagtctctatcatctagttttttgaacaaggcaagtgaaataagttca 28125771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 28125698 - 28125636
Alignment:
Q  298 ttgtgtttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||||||||||||||||||| || |||||||||||||||  ||| ||  ||||||||||||||    
T  28125698 ttgtgtttatgcagaagttcgagaatatgaaagtcttgactttgaacttttgtgaatatttaa 28125636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 675 - 792
Alignment:
Q  34 atagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagca 133  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  675 atagacaagaaaggaaaggccttcaagaagatgacaagactgaaaacgcttatcattgaaaatgaccatttttctaaaggtctcaagtatcttccaagca 774  T
Q  134 gtttgagtatattgaaat 151  Q
    |||||||  |||||||||    
T  775 gtttgagagtattgaaat 792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 360
Target Start/End: Original strand, 894 - 1033
Alignment:
Q  223 ttttgtttccgtcaacaaa--agaaatcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgtttatgcagaagttcca 319  Q
    |||||||| || |||||||  |||||||  ||||| ||||| ||| ||| ||||||| || |||||||  |||||| |||||||||||||||||||||||    
T  894 ttttgttttcgccaacaaagaagaaatcgctatgatagtat-agtgtttaatttttaattaatttatttgtttcttccttgtgtttatgcagaagttcca 992  T
Q  320 ggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    | | |||||| |||||| |||||||   |||||||||||||    
T  993 gaacatgaaaatcttgacattggacaggtgtgaatatttaa 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 17991516 - 17991301
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    ||||||| |||| || |||||||| ||||| | | || |  ||| |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||    
T  17991516 atatatacgaatttcgattccatgaaatccgtaacagtctggaatggaaaggccttcaagaagatgaaaaaactcaaaacacttatcattgaaaatgacc 17991417  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgagtatattgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggc 200  Q
    ||||||||| ||||| ||||||||||||||  ||||||||  ||||||||||||||||||||   || |||| ||| |||||| || |||  || |||||    
T  17991416 atttttctgaaggtcccaagtatcttccaaatagtttgagagtattgaaatggaaaggatgtccttcaaagtctctatcatcttgtttttcgaataaggc 17991317  T
Q  201 aagtgaaataacttca 216  Q
    ||||||||||| ||||    
T  17991316 aagtgaaataatttca 17991301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 17991219 - 17991159
Alignment:
Q  303 tttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaatga 363  Q
    ||||||||||||||| || ||||||||||||||| |||  ||  |||| ||||||||||||    
T  17991219 tttatgcagaagttcgagaatatgaaagtcttgacatttaaccgttgtcaatatttaatga 17991159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 18677883 - 18677713
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    |||||| ||||||||||||||||||| || ||||||||||| |||||||||| |  |||||||  ||||||||||||||||||||| ||||||||  |||    
T  18677883 ggaaagaccttcaagaagatgacaaatctcaaaacacttattattgaaaatgtctctttttctaaaggtctcaagtatcttccaaggagtttgagagtat 18677784  T
Q  146 tgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||||||| |||||||  ||  ||| ||| ||||||| |||||    ||||||||||||||||| ||||    
T  18677783 tgaaatggaatggatgttgttcagagtctctatcatctattatttgttgcaaggcaagtgaaataatttca 18677713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 18697725 - 18697555
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||||||| |  |||||||  || || ||||||||||||||||||||||||  |||    
T  18697725 ggaaaggccttcaagaagatgacaaatctcaaaacacttattattgaaaatgtctctttttctaaagatcccaagtatcttccaagcagtttgagagtat 18697626  T
Q  146 tgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||| ||| |||||||   |  ||| ||| |||||| ||||||  | ||||||||||||||||| ||||    
T  18697625 tgaaattgaatggatgttctacagagtctctatcatcttgtatttgcagcaaggcaagtgaaataatttca 18697555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 18653801 - 18653631
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    |||||||||||||||||||||||||| || ||||||||||| ||| |||||| |  |||||||  || || ||||||||||||||||||||||||  |||    
T  18653801 ggaaaggccttcaagaagatgacaaatctcaaaacacttattattaaaaatgtctctttttctaaagatcccaagtatcttccaagcagtttgagagtat 18653702  T
Q  146 tgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||| ||| |||||||  ||  ||| ||| ||||||| |||||    ||||||||||||||||| ||||    
T  18653701 tgaaattgaatggatgttcttcagagtctctatcatctattatttgctgcaaggcaagtgaaataatttca 18653631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 18729819 - 18729649
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||| |||||| | ||||||||  || || ||||||||||||||||||||||||  |||    
T  18729819 ggaaaggctttcaagaagatgacaaatctcaaaacacttattattaaaaatgtctatttttctaaagatcccaagtatcttccaagcagtttgagagtat 18729720  T
Q  146 tgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||| ||| |||||||  ||  ||| ||| ||||||  ||||||   ||||||||||||||||| ||||    
T  18729719 tgaaattgaatggatgttcttcagagtctctatcatcttttattttctgcaaggcaagtgaaataatttca 18729649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 360
Target Start/End: Complemental strand, 18653610 - 18653457
Alignment:
Q  208 ataacttcacaatgattttgtttccgtcaacaaaagaa-atcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgttt 305  Q
    |||| ||||||||||||||||||| ||||| |||| || |||| ||||| ||||| ||| ||||||||||| ||||||| ||  ||||||  ||||||||    
T  18653610 ataaattcacaatgattttgtttctgtcaagaaaataatatcactatgagagtat-agtgtttgatttttaatttatttgtttgtttcttctttgtgttt 18653512  T
Q  306 atgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||| |||  |||||||||||||||||| ||||||| ||||| |||||||||    
T  18653511 atgcagaggtttgaggatatgaaagtcttgacattggacaattgtcaatatttaa 18653457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 18722397 - 18722227
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    |||||||||||||||||||||||||| || ||||||||||| ||| |||||| |  |||||||  || || ||||||||||||||||||||||||  |||    
T  18722397 ggaaaggccttcaagaagatgacaaatctcaaaacacttattattaaaaatgtctctttttctaaagatcccaagtatcttccaagcagtttgagagtat 18722298  T
Q  146 tgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||| |||  ||||||  ||   || ||| ||||||| |||||  | ||||||||||||||||| ||||    
T  18722297 tgaaattgaatcgatgttcctcagtgtctctatcatctattatttgcagcaaggcaagtgaaataatttca 18722227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 360
Target Start/End: Complemental strand, 18677692 - 18677539
Alignment:
Q  208 ataacttcacaatgattttgtttccgtcaacaaaagaa-atcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgttt 305  Q
    |||| ||||||||||||||||||| ||||| |||| || |||| ||||| ||||| ||| ||||||||||| ||||||| ||  ||||||  ||||||||    
T  18677692 ataaattcacaatgattttgtttctgtcaagaaaataatatcactatgagagtat-agtgtttgatttttaatttatttgtttgtttcttctttgtgttt 18677594  T
Q  306 atgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||| |||  |||||||||||||||||| ||||||| |||||  ||||||||    
T  18677593 atgcagaggtttgaggatatgaaagtcttgacattggactattgtctatatttaa 18677539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 18687937 - 18687767
Alignment:
Q  46 ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctcaagtatcttccaagcagtttgagtatat 145  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||| |||||| |  |||| ||  || || ||||||||||||||||||||||||  |||    
T  18687937 ggaaaggctttcaagaagatgacaaatctcaaaacacttattattaaaaatgtctcttttactaaagatcccaagtatcttccaagcagtttgagagtat 18687838  T
Q  146 tgaaatggaaaggatgtttatcgaagtgtctgtcatctagtattttaaacaaggcaagtgaaataacttca 216  Q
    |||||| ||| |||||||   |  ||| ||| |||||| |||||   | ||||||||||||||||| ||||    
T  18687837 tgaaattgaatggatgttctacagagtctctatcatcttgtattggcagcaaggcaagtgaaataatttca 18687767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 18075641 - 18075780
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| | || || ||||||||| | ||||||||||| |||||||||||||||||||||||| | || |||||  |||| | ||||||||||     
T  18075641 atatatatgaatttgcactctatggaatccgtaatagacaagaatggaaaggccttcaagaagatgacacacctcaaaacgtttattactgaaaatggct 18075740  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgag 140  Q
    ||  |  |  | ||||||||||||||||||| ||||||||    
T  18075741 atcatattcaaagtctcaagtatcttccaagaagtttgag 18075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 208 - 360
Target Start/End: Complemental strand, 18729628 - 18729475
Alignment:
Q  208 ataacttcacaatgattttgtttccgtcaacaaaagaa-atcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgttt 305  Q
    |||| ||||||||||||||||||| ||||| |||| || |||| ||||| ||||| ||| ||| ||||||| ||||||| ||  ||||||  || |||||    
T  18729628 ataaattcacaatgattttgtttctgtcaagaaaataatatcactatgagagtat-agtgttttatttttaatttatttgtttgtttcttctttttgttt 18729530  T
Q  306 atgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||| |||  |||||||||||||||||| ||||||| | ||| |||||||||    
T  18729529 atgcagaggtttgaggatatgaaagtcttgacattggacaagtgtcaatatttaa 18729475  T

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Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 360
Target Start/End: Complemental strand, 18687746 - 18687594
Alignment:
Q  208 ataacttcacaatgattttgtttccgtcaacaaaagaa-atcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgttt 305  Q
    |||| ||||||||||||||||| | ||||| |||| || |||| || || ||||| ||| ||| ||||||| ||||||| ||  ||||||  ||||||||    
T  18687746 ataaattcacaatgattttgtt-ctgtcaagaaaataatatcattacgagagtat-agtgttttatttttaatttatttgtttgtttcttctttgtgttt 18687649  T
Q  306 atgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||| |||  |||||||||||||||||| ||||||| ||||| |||||||||    
T  18687648 atgcagaggtttgaggatatgaaagtcttgacattggacaattgtcaatatttaa 18687594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 360
Target Start/End: Complemental strand, 18722206 - 18722053
Alignment:
Q  208 ataacttcacaatgattttgtttccgtcaacaaaagaa-atcagtatgaaagtattagtctttgatttttagtttatttattc-tttctttcttgtgttt 305  Q
    |||| ||||||||||||||||||  ||||| |||| || |||| ||||| ||||| ||| ||| ||||||| ||||||| ||  ||||||  ||||||||    
T  18722206 ataaattcacaatgattttgtttatgtcaagaaaataatatcactatgagagtat-agtgttttatttttaatttatttgtttgtttcttctttgtgttt 18722108  T
Q  306 atgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    ||||||| |||  || ||||||||||||||| ||||||| | ||| |||||||||    
T  18722107 atgcagaggtttgagcatatgaaagtcttgacattggacaagtgtcaatatttaa 18722053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 360
Target Start/End: Complemental strand, 18697481 - 18697382
Alignment:
Q  262 tagtctttgatttttagtttatttattc-tttctttcttgtgtttatgcagaagttccaggatatgaaagtcttgatattggacgattgtgaatatttaa 360  Q
    |||| ||||||||||| | ||||| ||  ||||||  ||||||||||||||| |||  |||||||||||||||||| ||||||| ||||| |||||||||    
T  18697481 tagtatttgatttttaatatatttgtttgtttcttctttgtgtttatgcagaggtttgaggatatgaaagtcttgacattggacaattgtcaatatttaa 18697382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 61449 - 61588
Alignment:
Q  1 atatatatgaatctccattccatggaatccatgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggcc 100  Q
    |||||||||||| | || || ||||||||| | ||||||||||| |||||||||||||||||||||||| | || |||||  |||| | ||||||||||     
T  61449 atatatatgaatttgcactctatggaatccgtaatagacaagaatggaaaggccttcaagaagatgacacacctcaaaacgtttattactgaaaatggct 61548  T
Q  101 atttttctggaggtctcaagtatcttccaagcagtttgag 140  Q
    ||  |  |  | ||||||||||||||||||| ||||||||    
T  61549 atcatattcaaagtctcaagtatcttccaagaagtttgag 61588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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