View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14160_low_10 (Length: 259)
Name: NF14160_low_10
Description: NF14160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14160_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 33122933 - 33122684
Alignment:
| Q |
1 |
caaattatacttatgatcttatacaccagtatttcaaatacattaaaatcaataagtaagctatgcaatcacatttgtatgagcttctagcaagtca--- |
97 |
Q |
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| T |
33122933 |
caaattatacttatgatcttatacaccagtatttcaaatacattaaaatcaataagtaagctatgaaatcacatttgtatgagcttctagcaagtcacat |
33122834 |
T |
|
| Q |
98 |
---tattattattattcatgccaacaactcttggaatattgagttagttctatctatttttaacgtagcagcaattcttaatattcctagtctctctctc |
194 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |
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| T |
33122833 |
tattattattattattcatttcaacaactcttggaatattgagttagttctgtctatttttaacgtagctgcaattcttaatattcctagtct----ctc |
33122738 |
T |
|
| Q |
195 |
taattcgcaacaagacaagcgtgtttggagttaccaagctaatggattatattc |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33122737 |
taattcgcaacaagacaagcgtgtttggagttaccaagctaatggattatattc |
33122684 |
T |
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