View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14161_high_5 (Length: 359)
Name: NF14161_high_5
Description: NF14161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14161_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 6 - 343
Target Start/End: Original strand, 2347706 - 2348043
Alignment:
| Q |
6 |
caaaggtctctctcctgctttgatattttggttggttctaatcccttgaagatgattgtcctcaaaaggaattttccctgtcaacaactcaaaacatatc |
105 |
Q |
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| T |
2347706 |
caaaggtctctctcctgctttgatattttggttggttctaatcccttgaagatgattgtcctcaaaaggaattttccctgtcaacaactcaaaacatatc |
2347805 |
T |
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| Q |
106 |
ataccaaagctatatgcatcggctttctctgagtacttacaagaggtaaaagcatttttcatttgttctagctcagttaaaacctcaggtgcataccaaa |
205 |
Q |
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| T |
2347806 |
ataccaaagctatatgcatcggctttctctgagtacttacaagaggtaaaagcatttttcatttgttctagctcagttaaaacctcaggtgcataccaaa |
2347905 |
T |
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| Q |
206 |
ttatagggttaatctcttcaccaattggattatgtgtcggtgaggatctagaagcattataaatttcaccattttcaacagatgacaacccaaatccaac |
305 |
Q |
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| T |
2347906 |
ttatagggttaatctcttcaccaattggattatgtgtcggtgaggatctagaagcattataaatttcaccattttcaacagatgacaacccaaatccaac |
2348005 |
T |
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| Q |
306 |
aacttttgcttgaaaataaccttcttgtgagtttctag |
343 |
Q |
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| T |
2348006 |
aacttttgcttgaaaataaccttcttgtgagtttctag |
2348043 |
T |
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