View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14162_high_13 (Length: 263)
Name: NF14162_high_13
Description: NF14162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14162_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 41772232 - 41772477
Alignment:
| Q |
1 |
taacatatatgagaaactggcaggcaattgaaatgcataaattgttctatataatatatagtttcaacataaataataactccataggataggaccatta |
100 |
Q |
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| T |
41772232 |
taacatatatgagaaactggcaggcaattgaaatgcataaattattctatataatatatagtttcaacataaataataactccataggataggaccatta |
41772331 |
T |
|
| Q |
101 |
taatttagaagtaatcaagctttatttataagctttcacaacaaggttgatgagaaatatttcattgtaaaccaagtagtagtagtagctaggnnnnnnn |
200 |
Q |
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| T |
41772332 |
taatttagaagtaatcatgctttatttataagctttcacaacaaggttgatgagaaatatttcattgtaaaccaagtggtagtagtagctaggaaaaaaa |
41772431 |
T |
|
| Q |
201 |
ntaacttaaacatgtacgatgtaccagtgctaccccccaccagatt |
246 |
Q |
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| T |
41772432 |
ataacttaaacatgtatgatgtaccagtgctaccccccaccagatt |
41772477 |
T |
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