View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14162_high_14 (Length: 262)
Name: NF14162_high_14
Description: NF14162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14162_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 32417864 - 32417634
Alignment:
| Q |
13 |
agcataggagagaaattctaagaagcaaaaatggattgttgtgtgtgcacaactatgccattaatattaaggcctccaaggaatacgatatgtggggcat |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
32417864 |
agcataggagagaaattctaagaagcaaaaatggattgttgtgtgtgcacaactatgccattaatattaaggcctccaaggaatacaatatgtggggcat |
32417765 |
T |
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| Q |
113 |
gttatgaaggagttaggagcataatcaacatgatgaatgatcttgaaactgagaaagcaaaaacaatcactactccgaatgattctcctgtttcgcggcg |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32417764 |
gttatgaaggagttaggagcataatcaacatgatgaatggtcttgaaactgagaaagcaaaaacaatcactactccgaatgattctcctgtttcgcggcg |
32417665 |
T |
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| Q |
213 |
aaattcgagtaaggcaagctctaattctttt |
243 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
32417664 |
aaattcgagtaaggcaagctctaattctttt |
32417634 |
T |
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