View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14162_low_16 (Length: 322)
Name: NF14162_low_16
Description: NF14162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14162_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 14 - 306
Target Start/End: Complemental strand, 33825672 - 33825380
Alignment:
| Q |
14 |
ggcatgtgatcatggctagaagacatagggaacagtgtactgtgtatagaaggagaaagccagttgttgttgaaagtctttcaaaggatttaaagttaag |
113 |
Q |
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| T |
33825672 |
ggcatgtgatcatggctagaagacatagggaacagtgtactgtgtatagaaggagaaagccagttgttgttgaaagtctttcaaaggatttaaagttaag |
33825573 |
T |
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| Q |
114 |
tctttcaaacaatgcagctagtgattcaactatctcaagcaccattgatggaaatgtctcaacttgcactaatcttttactcactccttcttcagctaaa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33825572 |
tctttcaaacaatgcagctagtgattcaactatctcaagcaccattgatggaaatgtctcaacttgcactaatcttttactcactccttcttcagctaaa |
33825473 |
T |
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| Q |
214 |
ctagttgttcctgttgagaatcaccaaggctatggatcactaatgggtatgcaatatttaataaactagtataaaacatggttttaagttgcg |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33825472 |
ctagttgttcctgttgagaatcaccaaggctatggatcactaatgggtatgcaatatttaataaactagtataaaacatggttttaagttgcg |
33825380 |
T |
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