View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14162_low_25 (Length: 220)
Name: NF14162_low_25
Description: NF14162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14162_low_25 |
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Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 8044023 - 8044210
Alignment:
| Q |
16 |
cagtattgatattcctgagaggaggcatggagaaggacgtaaacagcaaaatgatatacaggttggtaattcttactaattaactttcattataattcat |
115 |
Q |
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| T |
8044023 |
cagtattgatattcctgagaggaggcatggagaaggacgtaaacagcaaaatgatatacaggttggtaattcttactaattaactttcattataattcat |
8044122 |
T |
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| Q |
116 |
tcatagcattttaatttttctacctagtaattctagaataacttagttatagaagtaaatcaaattttcttggttgcatttaagtcct |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8044123 |
tcatagcattttaatttttctacctagtaattctagaataacttagttatagaagtaaatcaaattttcttggttgcatttaagtcct |
8044210 |
T |
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