View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14162_low_8 (Length: 549)

Name: NF14162_low_8
Description: NF14162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14162_low_8
NF14162_low_8
[»] chr1 (14 HSPs)
chr1 (1-296)||(26970619-26970905)
chr1 (227-298)||(7843100-7843171)
chr1 (226-297)||(47555069-47555140)
chr1 (228-292)||(422299-422363)
chr1 (249-292)||(47682253-47682296)
chr1 (227-293)||(28013018-28013084)
chr1 (241-291)||(42663232-42663282)
chr1 (249-298)||(10923101-10923150)
chr1 (227-291)||(10598200-10598264)
chr1 (249-297)||(38759864-38759912)
chr1 (188-290)||(43579522-43579625)
chr1 (227-272)||(4146708-4146753)
chr1 (249-298)||(14758406-14758455)
chr1 (249-297)||(32216429-32216477)
[»] chr4 (13 HSPs)
chr4 (1-298)||(47073059-47073347)
chr4 (227-297)||(14246507-14246577)
chr4 (249-305)||(25184491-25184547)
chr4 (249-298)||(34361275-34361324)
chr4 (249-298)||(36493473-36493522)
chr4 (249-292)||(879338-879381)
chr4 (249-292)||(6864413-6864456)
chr4 (249-292)||(49376345-49376388)
chr4 (230-292)||(5914938-5915000)
chr4 (249-298)||(33816300-33816349)
chr4 (249-298)||(35020815-35020864)
chr4 (249-297)||(4205362-4205410)
chr4 (249-297)||(47254118-47254166)
[»] chr8 (14 HSPs)
chr8 (300-509)||(9398203-9398404)
chr8 (31-162)||(41190673-41190804)
chr8 (249-299)||(43643358-43643408)
chr8 (249-298)||(5299710-5299759)
chr8 (249-297)||(16446640-16446688)
chr8 (249-297)||(37970284-37970332)
chr8 (245-305)||(38111049-38111109)
chr8 (249-292)||(4132456-4132499)
chr8 (253-292)||(41362803-41362842)
chr8 (245-291)||(1872582-1872628)
chr8 (226-304)||(3859359-3859436)
chr8 (241-291)||(5018556-5018606)
chr8 (245-299)||(30650896-30650950)
chr8 (249-290)||(35859311-35859352)
[»] chr2 (13 HSPs)
chr2 (7-142)||(1354322-1354457)
chr2 (29-142)||(1361208-1361321)
chr2 (227-298)||(6357136-6357207)
chr2 (205-299)||(18514393-18514488)
chr2 (249-297)||(31862230-31862278)
chr2 (249-292)||(3177317-3177360)
chr2 (228-299)||(7565607-7565678)
chr2 (245-292)||(17244776-17244823)
chr2 (249-300)||(18494055-18494106)
chr2 (249-292)||(19289105-19289148)
chr2 (227-301)||(59488-59562)
chr2 (249-298)||(45328068-45328116)
chr2 (249-297)||(4167300-4167348)
[»] chr3 (21 HSPs)
chr3 (227-290)||(5125534-5125597)
chr3 (241-299)||(42663983-42664041)
chr3 (229-297)||(11019794-11019862)
chr3 (249-292)||(20373027-20373070)
chr3 (249-298)||(37203437-37203486)
chr3 (227-292)||(54607960-54608025)
chr3 (249-297)||(37158077-37158125)
chr3 (249-292)||(26941024-26941067)
chr3 (249-292)||(39283021-39283064)
chr3 (249-292)||(51212541-51212584)
chr3 (241-291)||(23165291-23165341)
chr3 (232-290)||(29923035-29923093)
chr3 (232-290)||(29972188-29972246)
chr3 (249-299)||(40552016-40552066)
chr3 (227-272)||(31706508-31706553)
chr3 (249-298)||(36012509-36012558)
chr3 (245-290)||(53811435-53811480)
chr3 (249-289)||(1090062-1090102)
chr3 (249-297)||(3362624-3362672)
chr3 (249-297)||(11467179-11467227)
chr3 (249-301)||(46297517-46297569)
[»] chr5 (18 HSPs)
chr5 (226-292)||(21321064-21321130)
chr5 (249-298)||(23954550-23954599)
chr5 (245-289)||(12080405-12080449)
chr5 (228-298)||(8762858-8762928)
chr5 (226-292)||(22616804-22616870)
chr5 (228-292)||(13888423-13888487)
chr5 (229-289)||(26412147-26412207)
chr5 (249-292)||(12910733-12910776)
chr5 (249-299)||(19120237-19120287)
chr5 (249-298)||(24886465-24886514)
chr5 (249-290)||(27318244-27318285)
chr5 (249-290)||(31786402-31786443)
chr5 (249-298)||(34853843-34853892)
chr5 (249-298)||(35511230-35511279)
chr5 (249-298)||(40133763-40133812)
chr5 (249-297)||(2888194-2888242)
chr5 (249-297)||(38527986-38528034)
chr5 (249-297)||(43308409-43308457)
[»] scaffold0312 (1 HSPs)
scaffold0312 (228-292)||(8209-8273)
[»] chr7 (13 HSPs)
chr7 (249-297)||(37703258-37703306)
chr7 (227-283)||(49002539-49002595)
chr7 (245-292)||(4902653-4902700)
chr7 (249-299)||(31520499-31520549)
chr7 (227-292)||(8759551-8759616)
chr7 (228-301)||(25470737-25470810)
chr7 (249-290)||(31578831-31578872)
chr7 (249-292)||(9355591-9355634)
chr7 (249-292)||(24212095-24212138)
chr7 (249-292)||(35353461-35353504)
chr7 (249-287)||(10481958-10481996)
chr7 (226-287)||(23402045-23402106)
chr7 (249-297)||(26980659-26980707)
[»] chr6 (5 HSPs)
chr6 (245-298)||(6613655-6613708)
chr6 (228-292)||(25441803-25441867)
chr6 (245-279)||(4104349-4104383)
chr6 (228-292)||(4487724-4487788)
chr6 (240-292)||(21016730-21016782)
[»] scaffold0022 (1 HSPs)
scaffold0022 (249-298)||(145773-145822)


Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 26970619 - 26970905
Alignment:
Q  1 taagaagataagctagttcaaggaatttgttcatgtttagtggaatgtccatagtgttttctgcacctggtgggaattgctctacgtgtggtaaaggcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26970619 taagaagataagctagttcaaggaatttgttcatgtttagtggaatgtccatagtgttttcagcacctggtgggaattgctctacgtgtggtaaaggcaa 26970718  T
Q  101 ccttactaatttgataaatgcttcaatggttttgggtgttttggcaaaggagatgaagaagatgaagaacaaaatgaataattacattggtccatcggca 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||||||| |||    
T  26970719 ccttactaatttgataaatgcttcaatggttttaggtgttttggcaaagg---------agatgaagaacaaaatgaataattacattggtccatcagca 26970809  T
Q  201 gaatactagttgacatgacgtaagggttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccc 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26970810 gaatactagttgacatgacgtaaggattatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccataaaagcaccc 26970905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 7843100 - 7843171
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    ||||||||||||  ||  ||||||||||||| |||||||||| |||  ||||||||||||||||||||||||    
T  7843100 ttatgctattggccaaccaaaataactttttaaaaaaagtcattttcttgactacaccatagaagcaccctt 7843171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 47555069 - 47555140
Alignment:
Q  226 gttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||| || ||| |||| ||||||| ||||    
T  47555069 gttatactattggttaaacaaaataactttttcaaaaaagtcagtttcctaactgcaccgtagaagccccct 47555140  T

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Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 422299 - 422363
Alignment:
Q  228 tatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||| ||||||| ||||||||| |||||||||||||||||| |||  |||| |||||||||||||    
T  422299 tatgttattggttaaataaaatgactttttcaaaaaagtcattttcttgacaacaccatagaagc 422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 47682296 - 47682253
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  47682296 taacttgttcaaaaaagtcagtttactgactgcaccatagaagc 47682253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 28013018 - 28013084
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagca 293  Q
    ||||||||||||  ||  ||||||||||||||||||||| || |||  |||||||||||||||||||    
T  28013018 ttatgctattggctaaccaaaataactttttcaaaaaagacattttcttgactacaccatagaagca 28013084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 42663282 - 42663232
Alignment:
Q  241 aaataaaataactttttcaaaaaagtcagtttactgactacaccatagaag 291  Q
    |||||||||||||||||||||||||||| |||  ||||| |||||||||||    
T  42663282 aaataaaataactttttcaaaaaagtcaatttcgtgactgcaccatagaag 42663232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 10923101 - 10923150
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||| ||||||||| |||||| |||||||||||| |||||    
T  10923101 taactttttcaaaagagtcagttttctgactgcaccatagaagctccctt 10923150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 10598200 - 10598264
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaag 291  Q
    |||| |||||||| ||| |||| |||||||||||||||||||||||  ||||| |||| ||||||    
T  10598200 ttattctattggttaaacaaaacaactttttcaaaaaagtcagtttcttgactgcaccgtagaag 10598264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 38759864 - 38759912
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    ||||||||||||||||||||||| | ||||| |||||||||||| ||||    
T  38759864 taactttttcaaaaaagtcagttaattgactgcaccatagaagctccct 38759912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 43579522 - 43579625
Alignment:
Q  188 tggtccatcggcagaatactagttgacatgacgt-aagggttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccat 286  Q
    ||||||| | |||||| | ||||||||||| | | || |||||| ||||||   ||| |||||||| ||||  |||||||||||||||||||| ||||||    
T  43579522 tggtccaccagcagaacattagttgacatggcattaacggttatactattgactaaacaaaataacattttttaaaaagtcagtttactgactgcaccat 43579621  T
Q  287 agaa 290  Q
    ||||    
T  43579622 agaa 43579625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 4146753 - 4146708
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagttt 272  Q
    |||| |||||| | ||| ||||||||||||||||||||||||||||    
T  4146753 ttattctattgattaaacaaaataactttttcaaaaaagtcagttt 4146708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 14758406 - 14758455
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||| |||||    
T  14758406 taactttttcaaaaaagtcagtttcgtgactgcaccgtagaagctccctt 14758455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 32216429 - 32216477
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    ||||||||| |||||||||||||| |||||| |||| ||||||| ||||    
T  32216429 taacttttttaaaaaagtcagttttctgactgcaccgtagaagctccct 32216477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 47073347 - 47073059
Alignment:
Q  1 taagaagataagctagttcaaggaatttgttcatgtttagtggaatgtccatagtgttttctgcacctggtgggaattgctctacgtgtggtaaaggcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47073347 taagaagataagctagttcaaggaatttgttcatgtttagtggaatgtccatagtgttttctgcacctggtgggaattgctctacgtgtggtaaaggcaa 47073248  T
Q  101 ccttactaatttgataaatgcttcaatggttttgggtgttttggcaaaggagatgaagaagatgaagaacaaaatgaataattacattggtccatcggca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||| |||    
T  47073247 ccttactaatttgataaatgcttcaatggttttgggtgttttggcaaaggagatga---------agaacaaaatgaataattacattggtccatcagca 47073157  T
Q  201 gaatactagttgacatgacgtaagggttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    || | || ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  47073156 gactcctggttgacatgacataagggttatgctattggtaaaataaaataactttttcaaaatagtcaatttactgactacaccatagaagcaccctt 47073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 14246507 - 14246577
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    ||||||||||||  ||||||||| |||||||||||||||||| |||  |||||||||||||||||||||||    
T  14246507 ttatgctattggctaaataaaatgactttttcaaaaaagtcattttcttgactacaccatagaagcaccct 14246577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 25184491 - 25184547
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcacccttatatata 305  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||    
T  25184491 taactttttcaaaaaagtcagttttctgactgcaccatagaagctcccttttatata 25184547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 34361324 - 34361275
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||||||||||||| |||||| |||| ||||||| |||||    
T  34361324 taactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccctt 34361275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 36493522 - 36493473
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||||||||| ||| |||||| |||||||||||| |||||    
T  36493522 taactttttcaaaaaagtcaatttcctgactgcaccatagaagctccctt 36493473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 879381 - 879338
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||  ||||||||||||| |||||||||||||||||||    
T  879381 taactttttttaaaaagtcagttttctgactacaccatagaagc 879338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 6864413 - 6864456
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| |||||| |||| |||||||    
T  6864413 taactttttcaaaaaagtcagttttctgactgcaccgtagaagc 6864456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 49376345 - 49376388
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| |||||| |||| |||||||    
T  49376345 taactttttcaaaaaagtcagtttcctgactgcaccgtagaagc 49376388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 5915000 - 5914938
Alignment:
Q  230 tgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||| ||| ||||| ||||||| |||||||||| |||  ||||| ||||||||||||    
T  5915000 tgctattggttaaacaaaatgacttttttaaaaaagtcatttttttgactgcaccatagaagc 5914938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 33816349 - 33816300
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||||||||||||| |||||| || | ||||||| |||||    
T  33816349 taactttttcaaaaaagtcagtttcctgactgcatcgtagaagctccctt 33816300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 35020864 - 35020815
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    ||||||||| |||| ||||||||| ||||||||||| ||||||| |||||    
T  35020864 taacttttttaaaagagtcagttttctgactacaccgtagaagctccctt 35020815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 4205362 - 4205410
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||| ||||    
T  4205362 taactttttcaaaaaagtcagtttcttgactgcaccgtagaagctccct 4205410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 47254118 - 47254166
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||| ||||    
T  47254118 taactttttcaaaaaagtcagtttgatgactccaccgtagaagctccct 47254166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 2e-87; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 300 - 509
Target Start/End: Original strand, 9398203 - 9398404
Alignment:
Q  300 tatatatatcatatttctttctttaataaagattaaaattggatttgggaaatattgcaatgatcaaaagaaatattaattaacctcaacaaatatatat 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    |||||||||||||||||    
T  9398203 tatatatatcatatttctttctttaataaagattaaaattggatttgggaaatattacaatgatcaaaagaaatattaa----cctcaacaaatatatat 9398298  T
Q  400 atacacatacacgaaaattgaccaatccattaaaggagaggtgacatatttggcttgttgcatcaataaagaccaaatctttatatcgaactatatcttg 499  Q
    |||    || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9398299 ata----tatacgaaaattgaccaatccattaaaggtgaggtgacatatttggcttgttgcatcaataaagaccaaatctttatatcgaactatatcttg 9398394  T
Q  500 taacttcaaa 509  Q
    ||||||||||    
T  9398395 taacttcaaa 9398404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 41190804 - 41190673
Alignment:
Q  31 tcatgtttagtggaatgtccatagtgttttctgcacctggtgggaattgctctacgtgtggtaaaggcaaccttactaatttgataaatgcttcaatggt 130  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||| |    
T  41190804 tcatgtttactggaatgtccatagtgttttctgcacctggtgggaattgctctacgtgtggtaaaggtaaccttactaatttgataaatggttgaatgct 41190705  T
Q  131 tttgggtgttttggcaaaggagatgaagaaga 162  Q
    ||||||||||||||||||||||| || |||||    
T  41190704 tttgggtgttttggcaaaggagacgacgaaga 41190673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 43643408 - 43643358
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctta 299  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  43643408 taactttttcaaaaaagtcagttttctgactgcaccatagaagctccctta 43643358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 5299759 - 5299710
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    ||||||||||||||||||||||||  ||||| |||||||||||| |||||    
T  5299759 taactttttcaaaaaagtcagtttcatgactgcaccatagaagctccctt 5299710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 16446688 - 16446640
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  16446688 taactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccct 16446640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 37970332 - 37970284
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||||||||||||||| ||| |||||| |||||||||||| ||||    
T  37970332 taactttttcaaaaaagtcactttcctgactgcaccatagaagctccct 37970284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 305
Target Start/End: Original strand, 38111049 - 38111109
Alignment:
Q  245 aaaataactttttcaaaaaagtcagtttactgactacaccatagaagcacccttatatata 305  Q
    |||||||||||| |||||| ||||||||||| ||| |||||||||||| |||  |||||||    
T  38111049 aaaataacttttccaaaaatgtcagtttactcactgcaccatagaagcgcccagatatata 38111109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 4132499 - 4132456
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||    
T  4132499 taacttttccaaaaaagtcagtttgctgactgcaccatagaagc 4132456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 41362803 - 41362842
Alignment:
Q  253 tttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  41362803 tttttcaaaaaagtcagtttcctgactgcaccatagaagc 41362842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 1872628 - 1872582
Alignment:
Q  245 aaaataactttttcaaaaaagtcagtttactgactacaccatagaag 291  Q
    ||||| |||||||||||||||||| |||  |||||||||||||||||    
T  1872628 aaaatgactttttcaaaaaagtcattttcttgactacaccatagaag 1872582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 304
Target Start/End: Original strand, 3859359 - 3859436
Alignment:
Q  226 gttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcacccttatatat 304  Q
    ||||| |||||||  ||| |||||||||||||||||||||| ||||| || ||| |||| ||||||  |||||||||||    
T  3859359 gttatactattggctaaacaaaataactttttcaaaaaagt-agtttcctaactgcaccgtagaagtgcccttatatat 3859436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 5018556 - 5018606
Alignment:
Q  241 aaataaaataactttttcaaaaaagtcagtttactgactacaccatagaag 291  Q
    |||||||||||||||||||||||||||| |||  ||| | |||||||||||    
T  5018556 aaataaaataactttttcaaaaaagtcaatttcgtgattgcaccatagaag 5018606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 30650950 - 30650896
Alignment:
Q  245 aaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccctta 299  Q
    |||||||||||||||||||||||| |||  ||||| |||| ||||||| ||||||    
T  30650950 aaaataactttttcaaaaaagtcaatttcttgactgcaccgtagaagctccctta 30650896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 35859311 - 35859352
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaa 290  Q
    |||||||||||||||||||||||| |||||| |||| |||||    
T  35859311 taactttttcaaaaaagtcagtttcctgactgcaccgtagaa 35859352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 1354457 - 1354322
Alignment:
Q  7 gataagctagttcaaggaatttgttcatgtttagtggaatgtccatagtgttttctgcacctggtgggaattgctctacgtgtggtaaaggcaaccttac 106  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  1354457 gataggctagttcaaggtatttgttcatgtttattggaatgtccatagtgttttctgcacctggtgggagttgctctatgtgtggtaaaggcaatcttac 1354358  T
Q  107 taatttgataaatgcttcaatggttttgggtgtttt 142  Q
     |||||||| |||| |||||||||||||||||||||    
T  1354357 caatttgatgaatggttcaatggttttgggtgtttt 1354322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 1361321 - 1361208
Alignment:
Q  29 gttcatgtttagtggaatgtccatagtgttttctgcacctggtgggaattgctctacgtgtggtaaaggcaaccttactaatttgataaatgcttcaatg 128  Q
    |||||||||| || |||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||| ||||| || |||| |||||||    
T  1361321 gttcatgtttggttgaatgtccatagtgttttctgcgcctggtgggagttgctctatgtgtggtaaaggcaatcttaccaatttaatgaatggttcaatg 1361222  T
Q  129 gttttgggtgtttt 142  Q
    ||||||||||||||    
T  1361221 gttttgggtgtttt 1361208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 6357136 - 6357207
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    ||||||||||||  |||| |||| |||||||||||||||||| |||  ||||||||||||||||||||||||    
T  6357136 ttatgctattggctaaattaaatgactttttcaaaaaagtcattttcttgactacaccatagaagcaccctt 6357207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 205 - 299
Target Start/End: Complemental strand, 18514488 - 18514393
Alignment:
Q  205 actagttgacatgacgt-aagggttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccctta 299  Q
    ||||||||||||||| | ||  ||||| ||||| |  ||| |||||||||||||||||||| ||||||| |||||| |||| ||||||| ||||||    
T  18514488 actagttgacatgacattaacagttatactattagctaaacaaaataactttttcaaaaaattcagtttcctgactccaccgtagaagccccctta 18514393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 31862230 - 31862278
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||||||||||||||||||| | |||| |||||||||||| ||||    
T  31862230 taactttttcaaaaaagtcagtttcccgactgcaccatagaagctccct 31862278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 3177317 - 3177360
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| |||||| |||| |||||||    
T  3177317 taactttttcaaaaaagtcagtttcctgactgcaccgtagaagc 3177360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 7565607 - 7565678
Alignment:
Q  228 tatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccctta 299  Q
    |||||||||||| ||| ||||| ||||||| |||||||||| |||  ||||| |||| ||||||| ||||||    
T  7565607 tatgctattggttaaacaaaatgacttttttaaaaaagtcatttttttgactgcaccgtagaagctccctta 7565678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 17244823 - 17244776
Alignment:
Q  245 aaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    ||||||| |||||||||||||||||||| |||||| ||| ||||||||    
T  17244823 aaaataattttttcaaaaaagtcagttttctgactgcactatagaagc 17244776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 18494106 - 18494055
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcacccttat 300  Q
    ||||||||||||||||||||||||  |||||||||| || |||| |||||||    
T  18494106 taactttttcaaaaaagtcagtttcatgactacaccgtataagctcccttat 18494055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 19289148 - 19289105
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| || ||| ||||||||||||    
T  19289148 taactttttcaaaaaagtcagtttcctaactgcaccatagaagc 19289105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 59488 - 59562
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcacccttata 301  Q
    |||||| |||||  |||||||||||||||||||||||||||| ||   | ||||||||||| |||  ||||||||    
T  59488 ttatgcaattggctaaataaaataactttttcaaaaaagtcatttgcttaactacaccataaaaggccccttata 59562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 45328068 - 45328116
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||||||||||||| |||||| |||| ||||||| |||||    
T  45328068 taactttttcaaaaaagtcagttt-ctgactgcaccgtagaagctccctt 45328116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 4167300 - 4167348
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||| ||||    
T  4167300 taactttttcaaaaaagtcaattttctgactgcaccgtagaagctccct 4167348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 9e-16; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 5125534 - 5125597
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaa 290  Q
    ||||| ||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  5125534 ttatgttattggttaaataaaataactttttcaaaaaagtcattttcttgactacaccatagaa 5125597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 42664041 - 42663983
Alignment:
Q  241 aaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccctta 299  Q
    |||||||||||||||||| ||||||||| |||  |||||||||||||||||| ||||||    
T  42664041 aaataaaataactttttctaaaaagtcattttcttgactacaccatagaagccccctta 42663983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 11019794 - 11019862
Alignment:
Q  229 atgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    ||||||||||  ||||||||| |||||||||||||| ||| |||  |||||||||||||||||| ||||    
T  11019794 atgctattggctaaataaaatgactttttcaaaaaaatcatttttttgactacaccatagaagccccct 11019862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 20373070 - 20373027
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| |||||| ||||||||||||    
T  20373070 taactttttcaaaaaagtcagtttcctgactgcaccatagaagc 20373027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 37203437 - 37203486
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||||||||||||| |||||| |||| ||||||| |||||    
T  37203437 taactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccctt 37203486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 54607960 - 54608025
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    ||||| ||||||  ||||||||| |||||||||||||||||| |||  | ||||||||||||||||    
T  54607960 ttatgttattggctaaataaaatgactttttcaaaaaagtcattttcttaactacaccatagaagc 54608025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 37158077 - 37158125
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  37158077 taactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccct 37158125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 26941067 - 26941024
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| |||||| |||| |||||||    
T  26941067 taactttttcaaaaaagtcagttttctgactgcaccgtagaagc 26941024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 39283021 - 39283064
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| |||||| |||| |||||||    
T  39283021 taactttttcaaaaaagtcagtttcctgactgcaccgtagaagc 39283064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 51212584 - 51212541
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||    
T  51212584 taactttttcaaaaatgtcagttttctgactgcaccatagaagc 51212541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 23165341 - 23165291
Alignment:
Q  241 aaataaaataactttttcaaaaaagtcagtttactgactacaccatagaag 291  Q
    |||||||||||||||||||||||||||| |||  ||||| |||| ||||||    
T  23165341 aaataaaataactttttcaaaaaagtcaatttcatgactgcaccgtagaag 23165291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 29923093 - 29923035
Alignment:
Q  232 ctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaa 290  Q
    ||||| || ||||||||| ||||||| |||||||||| |||  ||||||||||||||||    
T  29923093 ctattagttaaataaaatgactttttaaaaaaagtcattttcttgactacaccatagaa 29923035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 29972246 - 29972188
Alignment:
Q  232 ctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaa 290  Q
    ||||| || ||||||||| ||||||| |||||||||| |||  ||||||||||||||||    
T  29972246 ctattagttaaataaaatgactttttaaaaaaagtcattttcttgactacaccatagaa 29972188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 40552066 - 40552016
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctta 299  Q
    |||||||||||||||||||||||| | |||| |||| ||||||| ||||||    
T  40552066 taactttttcaaaaaagtcagtttccagactgcaccgtagaagctccctta 40552016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 31706553 - 31706508
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagttt 272  Q
    |||| |||||| | ||| ||||||||||||||||||||||||||||    
T  31706553 ttatactattgattaaacaaaataactttttcaaaaaagtcagttt 31706508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 36012509 - 36012558
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||| |||||    
T  36012509 taactttttcaaaaaagtcagtttcatgactgcaccgtagaagctccctt 36012558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 53811480 - 53811435
Alignment:
Q  245 aaaataactttttcaaaaaagtcagtttactgactacaccatagaa 290  Q
    |||||||||||||||| ||||||||||| |||||| |||| |||||    
T  53811480 aaaataactttttcaagaaagtcagttttctgactgcaccgtagaa 53811435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 1090062 - 1090102
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccataga 289  Q
    ||||||||| |||||||||||||| ||||||||||| ||||    
T  1090062 taacttttttaaaaaagtcagtttcctgactacaccgtaga 1090102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 3362624 - 3362672
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||| ||||||||||| ||| |||||| |||||||||||| ||||    
T  3362624 taacttttccaaaaaagtcaatttcctgactgcaccatagaagctccct 3362672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 11467179 - 11467227
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||| ||||    
T  11467179 taactttttcaaaaaagtcagtttgatgactgcaccgtagaagctccct 11467227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 46297569 - 46297517
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcacccttata 301  Q
    ||||||||| ||||||||||||||  ||||| |||| ||||||| ||||||||    
T  46297569 taacttttttaaaaaagtcagttttttgactgcaccgtagaagctcccttata 46297517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 21321064 - 21321130
Alignment:
Q  226 gttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    ||||| |||||||  ||| |||||||||||||||||||||||||||| ||| || ||||||||||||    
T  21321064 gttatactattggctaaacaaaataactttttcaaaaaagtcagttttctggctgcaccatagaagc 21321130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 23954599 - 23954550
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  23954599 taactttttcaaaaaagtcagtttcctgactgcaccatagaagctccctt 23954550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 12080449 - 12080405
Alignment:
Q  245 aaaataactttttcaaaaaagtcagtttactgactacaccataga 289  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  12080449 aaaataactttttcaaaaaagtcaatttcctgactacaccataga 12080405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 8762928 - 8762858
Alignment:
Q  228 tatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||| ||| ||||| ||||||| |||||||||| |||  ||||| |||||||||||| |||||    
T  8762928 tatgctattggttaaacaaaatgacttttttaaaaaagtcatttttttgactgcaccatagaagctccctt 8762858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 22616804 - 22616870
Alignment:
Q  226 gttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    ||||| |||||||  ||| |||||||||||| ||||||| ||||||| |||||| ||||||||||||    
T  22616804 gttatactattggctaaacaaaataacttttccaaaaaaatcagttttctgactgcaccatagaagc 22616870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 13888423 - 13888487
Alignment:
Q  228 tatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    ||||| |||||| ||||||||| ||||||| |||||||||| |||  | ||||||||||||||||    
T  13888423 tatgcaattggttaaataaaatgacttttttaaaaaagtcattttttttactacaccatagaagc 13888487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 26412147 - 26412207
Alignment:
Q  229 atgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccataga 289  Q
    ||||||||||  ||||||||| ||||||||||| |||||| |||  |||||||||||||||    
T  26412147 atgctattggctaaataaaatgactttttcaaataagtcattttcttgactacaccataga 26412207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 12910733 - 12910776
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||    
T  12910733 taacttttccaaaaaagtcagtttcctgactgcaccatagaagc 12910776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 19120237 - 19120287
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctta 299  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||| ||||||    
T  19120237 taactttttcaaaaaagtcagtttcatgactgcaccttagaagctccctta 19120287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 24886465 - 24886514
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||| |||||    
T  24886465 taactttttcaaaaaagtcagtttcttgactgcaccataaaagctccctt 24886514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 27318285 - 27318244
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaa 290  Q
    ||||||||| |||||||||||||| |||||| ||||||||||    
T  27318285 taacttttttaaaaaagtcagttttctgactgcaccatagaa 27318244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 31786443 - 31786402
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaa 290  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  31786443 taactttttcaaaaaagtcagtttcctgattgcaccatagaa 31786402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 34853892 - 34853843
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||| ||||||||||||||| | |||| |||||||||||| |||||    
T  34853892 taacttttccaaaaaagtcagtttcccgactgcaccatagaagctccctt 34853843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 35511279 - 35511230
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    ||||||||| |||||||||||||| |||||| |||| ||||||| |||||    
T  35511279 taacttttttaaaaaagtcagtttcctgactgcaccgtagaagctccctt 35511230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 40133763 - 40133812
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||| |||||    
T  40133763 taactttttcaaaaaagtcaattttctgactgcaccgtagaagctccctt 40133812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 2888242 - 2888194
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||| ||||    
T  2888242 taactttttcaaaaaagtcaattttctgactgcaccgtagaagccccct 2888194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 38528034 - 38527986
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||||||||||| ||||||| |||||| |||| ||||||| ||||    
T  38528034 taactttttcaaaaaaatcagtttcctgactgcaccgtagaagctccct 38527986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 43308457 - 43308409
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||||||||||||||||||| || ||| |||||| ||||| ||||    
T  43308457 taactttttcaaaaaagtcagtttcctaactgcaccattgaagctccct 43308409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 8273 - 8209
Alignment:
Q  228 tatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||| ||||||| ||||||||| |||||||||||||||||| |||  |||| |||||||||||||    
T  8273 tatgttattggttaaataaaatgactttttcaaaaaagtcattttcttgacaacaccatagaagc 8209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 37703306 - 37703258
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    |||||||||||||||||||| |||||||||| |||||||||||| ||||    
T  37703306 taactttttcaaaaaagtcaatttactgactgcaccatagaagctccct 37703258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 49002539 - 49002595
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacac 283  Q
    |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||||||    
T  49002539 ttatactattgattaaataaaataactttttcaaaaaaatcagttttctgactacac 49002595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 4902653 - 4902700
Alignment:
Q  245 aaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  4902653 aaaataactttttcaaaaaagtcaattttctgacttcaccatagaagc 4902700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 31520549 - 31520499
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctta 299  Q
    |||||||||||||||||||||||| || ||| |||||||||||| ||||||    
T  31520549 taactttttcaaaaaagtcagtttcctaactgcaccatagaagctccctta 31520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 8759551 - 8759616
Alignment:
Q  227 ttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    ||||| ||||||  ||||||||| |||||||||||||||||| |||  || |||||||||||||||    
T  8759551 ttatgttattggctaaataaaatgactttttcaaaaaagtcattttcttggctacaccatagaagc 8759616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 25470737 - 25470810
Alignment:
Q  228 tatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagcacccttata 301  Q
    |||||||||||| ||| ||||| ||||||| |||||||||| |||  ||||| |||||||||||| ||| ||||    
T  25470737 tatgctattggttaaacaaaatgacttttttaaaaaagtcatttttttgactgcaccatagaagctcccatata 25470810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 31578872 - 31578831
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaa 290  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  31578872 taactttttcaaaaaagtcagtttcctgactgcaccatagaa 31578831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 9355634 - 9355591
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| ||| || ||||||||||||    
T  9355634 taactttttcaaaaaagtcagtttcctgcctgcaccatagaagc 9355591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 24212095 - 24212138
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| |||||| |||| |||||||    
T  24212095 taactttttcaaaaaagtcagtttcctgactgcaccgtagaagc 24212138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 35353461 - 35353504
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||||||||||||||| |||||| |||| |||||||    
T  35353461 taactttttcaaaaaagtcagtttcctgactgcaccttagaagc 35353504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 10481958 - 10481996
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccata 287  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  10481958 taactttttcaaaaaagtcagttttctgactgcaccata 10481996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 23402106 - 23402045
Alignment:
Q  226 gttatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccata 287  Q
    ||||| |||||||  ||| ||||||||||||| ||||||||||||||  ||||| |||||||    
T  23402106 gttatactattggctaaacaaaataacttttttaaaaaagtcagttttttgactgcaccata 23402045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 26980659 - 26980707
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccct 297  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||| ||||    
T  26980659 taactttttcaaaaaagtcagtttcatgactgcaccttagaagctccct 26980707  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 6613708 - 6613655
Alignment:
Q  245 aaaataactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||||||||||||||||| |||||| |||| || |||| |||||    
T  6613708 aaaataactttttcaaaaaagtcagtttcctgactgcaccgtacaagctccctt 6613655  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 25441803 - 25441867
Alignment:
Q  228 tatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||| ||| ||||| ||||||| |||||||||| |||  ||||| ||||||||||||    
T  25441803 tatgctattggttaaacaaaatgacttttttaaaaaagtcatttttttgactgcaccatagaagc 25441867  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 4104349 - 4104383
Alignment:
Q  245 aaaataactttttcaaaaaagtcagtttactgact 279  Q
    |||||||||||||||||||||||||||| ||||||    
T  4104349 aaaataactttttcaaaaaagtcagttttctgact 4104383  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 4487788 - 4487724
Alignment:
Q  228 tatgctattggtaaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||||||||||| ||| ||||| ||||||| |||||||||| |||  | ||| ||||||||||||    
T  4487788 tatgctattggttaaacaaaatgacttttttaaaaaagtcatttttttaactgcaccatagaagc 4487724  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 21016782 - 21016730
Alignment:
Q  240 aaaataaaataactttttcaaaaaagtcagtttactgactacaccatagaagc 292  Q
    |||| ||||||||||||||||||||| || ||| |||||| |||| |||||||    
T  21016782 aaaaaaaaataactttttcaaaaaagacaattttctgactgcaccgtagaagc 21016730  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 145822 - 145773
Alignment:
Q  249 taactttttcaaaaaagtcagtttactgactacaccatagaagcaccctt 298  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||| |||||    
T  145822 taactttttcaaaaaagtcaatttcctgactgcaccgtagaagctccctt 145773  T

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