View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14163_high_12 (Length: 316)
Name: NF14163_high_12
Description: NF14163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14163_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 13 - 297
Target Start/End: Complemental strand, 12365630 - 12365346
Alignment:
| Q |
13 |
tgaattgcggtggaagattcccatgacttatacaaatagtatcaatttgagtcttttctctgtcttggagattaataaaactgatataatccattaagtc |
112 |
Q |
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| T |
12365630 |
tgaattgcggtggaagattcccatgacttatacatgtagtatcaatttgagtcttttctctgtgatggagattagtaaaattgatataatccattaagtc |
12365531 |
T |
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| Q |
113 |
tttggtaacctttaagcttggaggataatcatcaatagtttcccatatatctgcataatttttacaaatgaggaatttagtcctaggatctatgtgatat |
212 |
Q |
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| T |
12365530 |
tttggtaacctttaagcttggaggataatcatcaatagtttcccatatatctgcataatttttacaaataaggaatttagtcctgggatctatctgatat |
12365431 |
T |
|
| Q |
213 |
gatctgtgcacagtgaagactgtcttgggtttgccagtagtctctggtgccattcttctttttcttacttcacttaggactggtc |
297 |
Q |
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| T |
12365430 |
ggtctgtgcacagttaagactgtcttgagtttgccaatagcctctggtgccattcctctttttcttacttcacttaggactggtc |
12365346 |
T |
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