View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14163_high_13 (Length: 272)
Name: NF14163_high_13
Description: NF14163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14163_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 2870473 - 2870232
Alignment:
| Q |
18 |
tatataagcatacaatatctttatactactttttatagaaaataacctctgtcagttgagtccttagcatcctttttatcatcatggtcctctgtttcct |
117 |
Q |
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| T |
2870473 |
tatataagcatacaatatctttatactactttttatagaaaataacctctgtcagttgagtccttagcatcctttttatcatcatggtcccctgtttcct |
2870374 |
T |
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| Q |
118 |
tattatcagcatgatcatctgcaacctctgtatgaaaaatacgatgagttgaatgaatcaaagtagcatacaaaatctcatgcagtgacctaaacaattt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2870373 |
tattatcagcatgatcatctgcaacctctgtatgaaaaatacgatgagttgaatgaatcaaagtagcatacaaaatctcatgcagtgacctaaacaattt |
2870274 |
T |
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| Q |
218 |
tgacaaaatagaattatctgttctatgt--cgagctcctttg |
257 |
Q |
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|||||||||||||||||||||||||||| |||||||||||| |
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| T |
2870273 |
tgacaaaatagaattatctgttctatgtcacgagctcctttg |
2870232 |
T |
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