View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14163_high_16 (Length: 235)
Name: NF14163_high_16
Description: NF14163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14163_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42952007 - 42952227
Alignment:
| Q |
1 |
tcaagcatgtaattatcctatacacacaaacacacactgaaaaggagccactcctggtcccggactacgcttgtggcacaaatcttccttgagaagatgc |
100 |
Q |
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| T |
42952007 |
tcaagcatgtaattatcctatacacacaaacacacactgaaaaggagccactcctggtcccggactacgcttgtggcacaaatcttccttgagaagatgc |
42952106 |
T |
|
| Q |
101 |
aaaagctttcaagataataataacagtaaccaaaatacacaataacatacctcttcaagcaattgaagcgggccccagtgatcaccaacaccaaataaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
42952107 |
aaaagctttcaagataataataacagtaaccaaaatacacaataacatacctcttcaagcaattgaagcgggccccaatgatcaccaacaccaaataaaa |
42952206 |
T |
|
| Q |
201 |
atgcacattgatccttccttt |
221 |
Q |
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||||||||||||||||||||| |
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| T |
42952207 |
atgcacattgatccttccttt |
42952227 |
T |
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