View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14163_high_8 (Length: 390)

Name: NF14163_high_8
Description: NF14163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14163_high_8
NF14163_high_8
[»] chr4 (10 HSPs)
chr4 (75-366)||(20359317-20359625)
chr4 (75-285)||(9403782-9404007)
chr4 (75-285)||(1994277-1994502)
chr4 (75-285)||(56558696-56558921)
chr4 (78-285)||(30454144-30454366)
chr4 (199-285)||(24807884-24807971)
chr4 (6-54)||(1994209-1994257)
chr4 (6-54)||(20359251-20359298)
chr4 (6-54)||(56558943-56558991)
chr4 (6-54)||(9404028-9404077)
[»] chr8 (2 HSPs)
chr8 (75-285)||(44614666-44614891)
chr8 (6-54)||(44614596-44614644)
[»] chr7 (3 HSPs)
chr7 (75-285)||(18789308-18789534)
chr7 (75-197)||(22249408-22249530)
chr7 (9-40)||(22249342-22249373)
[»] scaffold0014 (2 HSPs)
scaffold0014 (79-285)||(8250-8471)
scaffold0014 (6-54)||(8496-8545)
[»] chr3 (4 HSPs)
chr3 (76-285)||(3299630-3299854)
chr3 (76-285)||(8961786-8962001)
chr3 (11-54)||(8961723-8961766)
chr3 (6-54)||(3299561-3299609)
[»] chr2 (2 HSPs)
chr2 (76-285)||(20266417-20266643)
chr2 (6-54)||(20266350-20266398)


Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 75 - 366
Target Start/End: Original strand, 20359317 - 20359625
Alignment:
Q  75 ccagttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 174  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20359317 ccagttaattagtttaaaaatggaagaaattataagaaataaaatttagacaaataaaggaattcaattactttgtcctccaaacaatgaattttgaaaa 20359416  T
Q  175 tgaaggaattcattcacttta-ccaaa-------------aaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaatt 259  Q
    ||||||||||||||||||||| |||||             |||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||||||||    
T  20359417 tgaaggaattcattcactttatccaaacaaagaattttgaaaatgaaaggaattcaattgaagcatttgaattccttagaattttaaatccccttgaatt 20359516  T
Q  260 ttcaaatgctctatccaaacacactc--agggttaggtggtggtatatgtgaattgctgattgtgattcattcatttcttccgtgtttcaatgtcgacga 357  Q
    |||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20359517 ttcaaatgctctatccaaacacacttttagggtttggtggtggtatatgtgaattgctgattgtgattcattcattccttccgtgtttcaatgtcgacga 20359616  T
Q  358 tggaattgc 366  Q
    |||||||||    
T  20359617 tggaattgc 20359625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 75 - 285
Target Start/End: Complemental strand, 9404007 - 9403782
Alignment:
Q  75 ccagttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 174  Q
    ||||||||||||||||||||| | |||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9404007 ccagttaattagtttaaaaatcgaagaaattataagaaataaaatttagtcaaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 9403908  T
Q  175 tgaaggaattcattcactttaccaa--------------aaaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaatt 259  Q
    ||||||||||||||||||||||| |              ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  9403907 tgaaggaattcattcactttacccaaacaatgaattttgaaaatgaaatgaattcaattgaagcatttgaattccttagaatttcaaattcccttgaatt 9403808  T
Q  260 ttcaaatgctctatccaaacacactc 285  Q
    ||||||||||||||||||||||||||    
T  9403807 ttcaaatgctctatccaaacacactc 9403782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 75 - 285
Target Start/End: Original strand, 1994277 - 1994502
Alignment:
Q  75 ccagttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 174  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1994277 ccagttaattagtttaaaaatggaagtaattataagaaataaaatgtagtcaaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 1994376  T
Q  175 tgaaggaattcattcactttaccaa--------------aaaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaatt 259  Q
    ||||||||||||||||||||||| |              ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  1994377 tgaaggaattcattcactttacccaaacaatgaattttgaaaatgaaaggaattcaattgaagcatttgaattccttaaaatttcaaattcccttgaatt 1994476  T
Q  260 ttcaaatgctctatccaaacacactc 285  Q
    ||||||||||||||||||||||||||    
T  1994477 ttcaaatgctctatccaaacacactc 1994502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 75 - 285
Target Start/End: Complemental strand, 56558921 - 56558696
Alignment:
Q  75 ccagttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 174  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  56558921 ccagttaattagtttaaaaatggaagtaattataagaaataaaatgtagtcaaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 56558822  T
Q  175 tgaaggaattcattcactttaccaa--------------aaaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaatt 259  Q
    ||||||||||||||||||||||| |              ||||||||| ||||| ||||||| ||||||||||||||  |||||||||||||||||||||    
T  56558821 tgaaggaattcattcactttacccaaacaatgaattttgaaaatgaaatgaattcaattgaagcatttgaattccttttaatttcaaattcccttgaatt 56558722  T
Q  260 ttcaaatgctctatccaaacacactc 285  Q
    ||||||||||||||||||||||||||    
T  56558721 ttcaaatgctctatccaaacacactc 56558696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 78 - 285
Target Start/End: Complemental strand, 30454366 - 30454144
Alignment:
Q  78 gttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaatga 177  Q
    |||||||||||| ||||||| || ||||||| ||| ||||||| |  |||| ||||||||||||||||||||||||| ||||||||| |||  |||||||    
T  30454366 gttaattagttttaaaatggaagtaattataagaaataaaattaaattaaagaaaggaattcaattactttgtcatctaaacaatgattttgaaaaatga 30454267  T
Q  178 aggaattcattcacttta-ccaa-------------aaaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaattttc 262  Q
    |||||||||||||||||| ||||             |||||||| | |||| ||||||| |||||||||| ||||| ||||||||||| |||||||||||    
T  30454266 aggaattcattcactttatccaaacaatgaattttgaaaatgaacgaaattcaattgaagcatttgaatttcttaggatttcaaattctcttgaattttc 30454167  T
Q  263 aaatgctctatccaaacacactc 285  Q
    |||| ||||||||||||||||||    
T  30454166 aaatcctctatccaaacacactc 30454144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 24807971 - 24807884
Alignment:
Q  199 aaaaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaattttcaaatgctctatccaaacacactc 285  Q
    |||||| || |||||| ||||||| |||||||| ||||||||||||||||||| |||| |||||||||| ||| ||||||||||||||    
T  24807971 aaaaattaagggaattcaattgaagcatttgaaatccttagaatttcaaattctcttggattttcaaatcctccatccaaacacactc 24807884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1994209 - 1994257
Alignment:
Q  6 gagtcaagaaatttaataaattatgatagaaaaaatattaaattaatta 54  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  1994209 gagtcaagaaatttaataaattatgatagaaaaaaatttaaattaatta 1994257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 20359251 - 20359298
Alignment:
Q  6 gagtcaagaaatttaataaattatgatagaaaaaatattaaattaatta 54  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20359251 gagtcaagaaatttaataaattatgatagaaaaaa-attaaattaatta 20359298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 56558991 - 56558943
Alignment:
Q  6 gagtcaagaaatttaataaattatgatagaaaaaatattaaattaatta 54  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  56558991 gagtcaagaaatttaataaattatgatagaaaaaaatttaaattaatta 56558943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 9404077 - 9404028
Alignment:
Q  6 gagtcaagaaatttaataaattatgatagaaaaaata-ttaaattaatta 54  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  9404077 gagtcaagaaatttaataaattatgatagaaaaaaaatttaaattaatta 9404028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 75 - 285
Target Start/End: Original strand, 44614666 - 44614891
Alignment:
Q  75 ccagttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 174  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44614666 ccagttaattagtttaaaaatggaagaaattataagaaataaaatttagtcaaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 44614765  T
Q  175 tgaaggaattcattcactttaccaa--------------aaaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaatt 259  Q
    ||||||||||||||||||||||| |              ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  44614766 tgaaggaattcattcactttacccaaacaatgaattttgaaaatgaaaggaattcaattgaagcatttgaattccttagaatttcaaattcccttggatt 44614865  T
Q  260 ttcaaatgctctatccaaacacactc 285  Q
    ||||||||||||||||||||||||||    
T  44614866 ttcaaatgctctatccaaacacactc 44614891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 44614596 - 44614644
Alignment:
Q  6 gagtcaagaaatttaataaattatgatagaaaaaatattaaattaatta 54  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  44614596 gagtcaagaaatttaataaattatgatagaaaaaaatttaaattaatta 44614644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 2e-68; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 75 - 285
Target Start/End: Original strand, 18789308 - 18789534
Alignment:
Q  75 ccagttaattagtttaaaaatggtagaaattataggaagtaaaa-tttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaa 173  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18789308 ccagttaattagtttaaaaatggaagaaattataagaaataaaaatttagtcaaataaaggaattcaattactttgtcatccaaacaatgaattttgaaa 18789407  T
Q  174 atgaaggaattcattcactttaccaa--------------aaaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaat 258  Q
    |||||||||||||||||||||||| |              ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||    
T  18789408 atgaaggaattcattcactttacccaaacaatgaattttgaaaatgaaaggaattcaattgaagcatttaaattccttagaatttcaaattcccttgaat 18789507  T
Q  259 tttcaaatgctctatccaaacacactc 285  Q
    |||||||||||||||||||||||||||    
T  18789508 tttcaaatgctctatccaaacacactc 18789534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 22249408 - 22249530
Alignment:
Q  75 ccagttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaa 174  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||  ||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  22249408 ccagttaattagtttaaaaatggaagaaattataagaaataaaatttagtcaaataaatgaattcaattactttctcatctaaacaatgaattttgaaaa 22249507  T
Q  175 tgaaggaattcattcactttacc 197  Q
    |||||||||||||||| ||||||    
T  22249508 tgaaggaattcattcaatttacc 22249530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 40
Target Start/End: Original strand, 22249342 - 22249373
Alignment:
Q  9 tcaagaaatttaataaattatgatagaaaaaa 40  Q
    ||||||||||||||||||||||||||||||||    
T  22249342 tcaagaaatttaataaattatgatagaaaaaa 22249373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 79 - 285
Target Start/End: Complemental strand, 8471 - 8250
Alignment:
Q  79 ttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaatgaa 178  Q
    ||||||||||| ||||||| |||||||||  ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8471 ttaattagttttaaaatggaagaaattatcagaaataaaatttagtcaaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaatgaa 8372  T
Q  179 ggaattcattcactttaccaa--------------aaaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaattttca 263  Q
    ||||||||||||||||||| |              ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  8371 ggaattcattcactttacccaaacaatgaattttgaaaatgaaaggaattcaattgaagcatttgaattccttcgaatttcaaattcccttgaattttca 8272  T
Q  264 aatgctctatccaaacacactc 285  Q
    ||||||||||||||||||||||    
T  8271 aatgctctatccaaacacactc 8250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 8545 - 8496
Alignment:
Q  6 gagtcaagaaatttaataaattatgatagaa-aaaatattaaattaatta 54  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  8545 gagtcaagaaatttaataaattatgatagaaaaaaaaattaaattaatta 8496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 7e-65; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 76 - 285
Target Start/End: Original strand, 3299630 - 3299854
Alignment:
Q  76 cagttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaat 175  Q
    |||||||||||||||||||||| ||||||||||  || ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3299630 cagttaattagtttaaaaatggaagaaattataaaaaataaaatttagtcaaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaat 3299729  T
Q  176 gaaggaattcattcactttacc--------------aaaaaatgaaaggaatt-aattgaaacatttgaattccttagaatttcaaattcccttgaattt 260  Q
    ||||||||||||||||||||||              | ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| |||||    
T  3299730 gaaggaattcattcactttacctaaacaatgaatttagaaaatgaaaggaattcaattgaagcatttgaattccttaaaatttcaaattcccttaaattt 3299829  T
Q  261 tcaaatgctctatccaaacacactc 285  Q
    | |||||||||||||||||||||||    
T  3299830 ttaaatgctctatccaaacacactc 3299854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 285
Target Start/End: Original strand, 8961786 - 8962001
Alignment:
Q  76 cagttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaat 175  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8961786 cagttaattagtttaaaaatggaagaaattataagaaataaaatttagtcaaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaat 8961885  T
Q  176 gaaggaattcattcacttta-ccaaaaaatgaa----aggaattaattgaa-acatttgaattccttagaatttcaaattcccttgaattttcaaatgct 269  Q
    ||||||||||||| |||||| ||||| ||||||       ||| ||  |||  || |||||||||||| |||||||||||||||||||||||||||||||    
T  8961886 gaaggaattcatttactttacccaaataatgaattttgaaaatgaaaggaattcaattgaattccttaaaatttcaaattcccttgaattttcaaatgct 8961985  T
Q  270 ctatccaaacacactc 285  Q
    ||||||||||||||||    
T  8961986 ctatccaaacacactc 8962001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 8961723 - 8961766
Alignment:
Q  11 aagaaatttaataaattatgatagaaaaaatattaaattaatta 54  Q
    ||||||||||||||||||||||||||||||  ||||||||||||    
T  8961723 aagaaatttaataaattatgatagaaaaaaatttaaattaatta 8961766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3299561 - 3299609
Alignment:
Q  6 gagtcaagaaatttaataaattatgatagaaaaaatattaaattaatta 54  Q
    ||||||| | |||||||||||||||||||||||||  ||||||||||||    
T  3299561 gagtcaaaatatttaataaattatgatagaaaaaaatttaaattaatta 3299609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 76 - 285
Target Start/End: Original strand, 20266417 - 20266643
Alignment:
Q  76 cagttaattagtttaaaaatggtagaaattataggaagtaaaatttagataaataaaggaattcaattactttgtcatccaaacaatgaattttgaaaat 175  Q
    |||||||||||||||||||||| |||| ||||| ||| ||||||||||  ||| |||| || ||||||||||| ||||||||||||||||||||||||||    
T  20266417 cagttaattagtttaaaaatggaagaatttataagaaataaaatttagtcaaagaaagaaaatcaattactttatcatccaaacaatgaattttgaaaat 20266516  T
Q  176 gaaggaattcattcactttacc--------------aaaaaatgaaaggaatt-aattgaaacatttgaattcct--tagaatttcaaattcccttgaat 258  Q
    |||||||||||||||| |  ||               |||||| |||| |||| ||||||| |||||||||||||  |||||||||||||||||||||||    
T  20266517 gaaggaattcattcacgtagcccaaacaatgaattttaaaaataaaagaaattcaattgaagcatttgaattccttatagaatttcaaattcccttgaat 20266616  T
Q  259 tttcaaatgctctatccaaacacactc 285  Q
    ||||||||  |||||||||||| ||||    
T  20266617 tttcaaatcatctatccaaacaaactc 20266643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 20266350 - 20266398
Alignment:
Q  6 gagtcaagaaatttaataaattatgatagaaaaaatattaaattaatta 54  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  20266350 gagtcaaaaaatttaataaattatgatagaaaaaaatttaaattaatta 20266398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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