View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14164_high_35 (Length: 236)
Name: NF14164_high_35
Description: NF14164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14164_high_35 |
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Alignment Details
Target: chr8 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 18000041 - 18000259
Alignment:
| Q |
1 |
atgttagtaagaaagaaaagacattctttttattataggtgtaaaatagnnnnnnntaacattttcaaattaatgtttcctttttatatataatttgtta |
100 |
Q |
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| T |
18000041 |
atgttagtaagaaagaaaagacattgtttttattataggtgtaaaatagaaaaaaataacattttcaaattaatgttttctttttatatataatttgtta |
18000140 |
T |
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| Q |
101 |
cacacggtttcaactttttcttaaacggtaacaaattttaatgtatttttagtacaatcaaaacttcgtgtgtaata-taaaaattgagacaaacatata |
199 |
Q |
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| T |
18000141 |
cacacggtttcaactttttcttacacggtaacaaattttaatgtatttttagtacaataaaaact--gtgtgtaatattaacaattgagaaaaacatata |
18000238 |
T |
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| Q |
200 |
tgtacaacaaatgataattac |
220 |
Q |
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||||||||||||||||||||| |
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| T |
18000239 |
tgtacaacaaatgataattac |
18000259 |
T |
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