View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14164_low_33 (Length: 250)
Name: NF14164_low_33
Description: NF14164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14164_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18000056 - 17999840
Alignment:
| Q |
1 |
tctttcttactaacatgaggaggatacacaagtccagagttcaaacctcggccacnnnnnnnnnnnnn--cattgaggaagatgcacatgagattcaaaa |
98 |
Q |
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| T |
18000056 |
tctttcttactaacatgaggaagatacacaagtccagggttcaaacctcggcaaaaaaaaaaaaaaaaaacattgaggaagatgcacatgggattcaaaa |
17999957 |
T |
|
| Q |
99 |
tgctcttataaaaatttgatgagaaatttcgatttgacccaagagtaaacattttctttcggattgttaaaaaattaagtcaaattttttgtttgtctat |
198 |
Q |
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|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |
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| T |
17999956 |
tgctcttataaaaattcgatgagaaatttcgatttgacctaagagtaaacattttcttacggattgttaaaaaattaagtcaaattttttatttgtctat |
17999857 |
T |
|
| Q |
199 |
tcaacacatcgaaactt |
215 |
Q |
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|||||||||| |||||| |
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| T |
17999856 |
tcaacacatcaaaactt |
17999840 |
T |
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