View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14164_low_6 (Length: 605)
Name: NF14164_low_6
Description: NF14164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14164_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 551; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 551; E-Value: 0
Query Start/End: Original strand, 15 - 581
Target Start/End: Complemental strand, 48695814 - 48695248
Alignment:
| Q |
15 |
cacagacagaagacagtaccattttattttggttcttgtttacaacggtcagcatagttacttcctggtttgttttaaatttaattttctattctcagag |
114 |
Q |
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| T |
48695814 |
cacagacagaagacagtaccattttattttggttcttgtttacaatggtcagcacagttacttcctggtttgttttaaatttaattttctattctcagag |
48695715 |
T |
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| Q |
115 |
tatttgtataatgtacaactttgattgattgattgctgctgcctcagtttgggcgggcttacattaacatacctacatgtacatctatatatgtacttaa |
214 |
Q |
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| T |
48695714 |
tatttgtataatatacaactttgattgattgattgctgctgcctcagtttgggcgggcttacattaacatacctacatgtacatctatatatgtacttaa |
48695615 |
T |
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| Q |
215 |
aaagtataataatgaatgaatgaataaaacattgggaaattggagttccaccctagccagccagctagctttgtcctgctgcttcctttggctttgtttg |
314 |
Q |
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| T |
48695614 |
aaagtataataatgaatgaatgaataaaacattgggaaattggagttccaccctagccagccagctagctttgtcctgctgcttcctttggctttgtttg |
48695515 |
T |
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| Q |
315 |
ttgttggacagtagaagtgggactccaaggattcaggctcattatgcctctgctgctactgcttaaaagcctctttaatgactttaatctcccttccgcc |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48695514 |
ttgttggacagtagaagtgggactccaaggattcaggctcattatgcctctgctgctactgcttaaaagcctctttaatgactttaatctcccttccgcc |
48695415 |
T |
|
| Q |
415 |
gaagataagggtgatgatgatgaagtagtggcctcacactcattgggtatatcaatccttaacattccatttccttcatcatcagctctgctgttgttat |
514 |
Q |
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| T |
48695414 |
gaagataagggtgatgatgatgaagtagtggcctcacactcattgggtatatcaatccttaacattccatttccttcatcatcagctctgctgttgttat |
48695315 |
T |
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| Q |
515 |
ttatagtattaccaccatcggatgatgatgaagaagtgttttgttccgaagtagtagatgaagaaga |
581 |
Q |
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| T |
48695314 |
ttatagtattatcaccatcggatgatgatgaagaagtgttttgttccgaagtagtagatgaagaaga |
48695248 |
T |
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