View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14165_high_12 (Length: 297)
Name: NF14165_high_12
Description: NF14165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14165_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 20 - 287
Target Start/End: Original strand, 33835689 - 33835955
Alignment:
| Q |
20 |
atcagcgtggaagaagatcaatcaaaattttagttgagaaatcataaattatcgttagggtaattcgttcgaggagcttaataactcacttagtcgttgg |
119 |
Q |
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| T |
33835689 |
atcagcgtggaagaagatcaatcaaaattttagctgagaaatcataaattatcgttagggtaattcattcgaggagcttaataactcacttagtcgttgg |
33835788 |
T |
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| Q |
120 |
cgagtgagacaaatgtagcttgtcaactagtttgcatcataaagtgtaggtaattaatcatttgcatcacttataaatttcattggtctataaataccat |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33835789 |
tgagtgagacaaatgtagcttgtcaactagtttgcatcataaagtgtaggtaattaatcatttgcatcacttataaatttcattggtctataaataccat |
33835888 |
T |
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| Q |
220 |
ttgtaaatttcactatagataaaatttagtcaatcaaacaacttattttacttgcaatttcacctatg |
287 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| |
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| T |
33835889 |
ttgtaaatttcactataaataaaatttagtcaatcaaacaacttattttacctgc-atttcacctatg |
33835955 |
T |
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