View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14165_low_14 (Length: 335)
Name: NF14165_low_14
Description: NF14165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14165_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 14 - 326
Target Start/End: Original strand, 33236960 - 33237272
Alignment:
| Q |
14 |
tgttaaccgtattcgccccttccttgataatatgattggtttctttcaaagtagcttcatcctggggagaggtacaaactactaataattctaagttttc |
113 |
Q |
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| T |
33236960 |
tgttaaccgtattcgccccttccttgataatatgattggtttctttcaaagtagcttcatcctggggagaggtacaaactactaataattctatgtttcc |
33237059 |
T |
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| Q |
114 |
tcaagtggtcaatcttgtacatatactccctagtccaagaaaggtatgttggtcttcaaaatagaccaagataaggcctataatagactgatttgaaagt |
213 |
Q |
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| T |
33237060 |
tcaagtggtcaatcttatacatatactccctattccaagaaaggtatgttggtcttcaaaatagaccaagataaggcctataatagactgatttgaaagt |
33237159 |
T |
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| Q |
214 |
ttcttgaacttactttgcaggaatttggctttcacacatccactgtttatttgattatgaattgtttaaattcatttttgttggtttatgagaaagagaa |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33237160 |
ttcttgaacttactttgcaggaatttggctttcacacatccactgtttatttgattatgaattgtttaaattcatttttgttggtttatgagaaagagaa |
33237259 |
T |
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| Q |
314 |
gtgttagaataat |
326 |
Q |
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||||||||||||| |
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| T |
33237260 |
gtgttagaataat |
33237272 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 1271941 - 1271998
Alignment:
| Q |
16 |
ttaaccgtattcgccccttccttgataatatgattggtttctttcaaagtagcttcat |
73 |
Q |
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|||||||||| ||||| ||||||||| || |||||||| ||||||||||||||||| |
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| T |
1271941 |
ttaaccgtatccgccctttccttgatgatttgattggtccttttcaaagtagcttcat |
1271998 |
T |
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