View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14165_low_17 (Length: 251)
Name: NF14165_low_17
Description: NF14165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14165_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 54891049 - 54891276
Alignment:
| Q |
13 |
gatttgataagatgttttccaaatttattatcgnnnnnnnnn--aagtaatgatttttaatacaacaaagcaaagtgtaacccacagaaacaaaaccgtg |
110 |
Q |
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| T |
54891049 |
gatttgataagatgttttccaaatttattatcgtttttttttttaagtaatgatttttaatacaacaaagcaaagtgtaacccacagaaacaaaaccgtg |
54891148 |
T |
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| Q |
111 |
ttccaaattgaatcactctgtctttacatgttttattttccataaaaacgtgtgcttcttttggcatgtaatgattaagaaatccccaaatgtagtggtg |
210 |
Q |
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| T |
54891149 |
ttccaaattgaatcactctgtctttacatgttttattttccataaaaacgtgtgcttcttttggcatgtaatgattaagaaatccccagatgtagtggtg |
54891248 |
T |
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| Q |
211 |
caagatacataggggttacaagtaagtt |
238 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
54891249 |
caagatacataggggttacaagtaagtt |
54891276 |
T |
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