View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14168_low_2 (Length: 445)
Name: NF14168_low_2
Description: NF14168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14168_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 21 - 427
Target Start/End: Complemental strand, 31304156 - 31303744
Alignment:
| Q |
21 |
atggccatagcgtaggatttcacaacgtagaatgtcgtccaacggatcaagcaaaccgtcccaatttctcatcccctgatactccttccacctttctcca |
120 |
Q |
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| T |
31304156 |
atggccatagcgtaggatttcacaacgtagaatgtcgtccaacggatcaagcaaaccgtcccaatttctcatcccttgatactccttccacctttttcca |
31304057 |
T |
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| Q |
121 |
actgttttagtttttgaacccaaaggtggtgatgatgatgatggtgatgagtgtaaagatgggaaattgttatggttttcgagatttatcgtgttttcta |
220 |
Q |
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| T |
31304056 |
agtgttttagtttttggatccataggtggtgatgatgatgatggtgatgagtgtaaagatgggaaattgttatggttttcgagatttatcgtgttttcta |
31303957 |
T |
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| Q |
221 |
agtgtaacgtggatttttgagtgttatcaattagttta------tgagtatggataatacagtgcagtttgagggtgtaggtattggttgaagggactgc |
314 |
Q |
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| T |
31303956 |
agtgtaacgtggatttttgagtgttatcaattagtttatctgtttgagtatggataacacagtgcagtttgagggtgtaggtattggttgaagggactgc |
31303857 |
T |
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| Q |
315 |
tggtgtacgtatgttaagcctcatttctttttgggatgggttagagaatggaatatacggagcaaatgagaatgaaaagaaagaaagaatttcctcattt |
414 |
Q |
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| T |
31303856 |
tggtgtacttatgttaagcctcatttctttttgggatgggttagagaatggaatatacggagcaaatgagaatgaaaagaaagaaagaatttcctcattt |
31303757 |
T |
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| Q |
415 |
tatggaacacaaa |
427 |
Q |
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| T |
31303756 |
tatggaacacaaa |
31303744 |
T |
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