View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14169_high_3 (Length: 349)
Name: NF14169_high_3
Description: NF14169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14169_high_3 |
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Alignment Details
Target: chr5 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 26427734 - 26428073
Alignment:
| Q |
1 |
ctgatcttccagcttcttttcctgttctgtatgctgcaaaatgcattgttctttttcctctaagacgttccgaagctgtaggacttccttgtcaaaagag |
100 |
Q |
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| T |
26427734 |
ctgatcttccagcttcttttcctcttctgtatgctgcaaaatgcattgttctttttcctctaagatgttccgaagctgtaggacttccttgtcaaaagag |
26427833 |
T |
|
| Q |
101 |
tctgcattctgctctattttcatcctctccttttgcagagtatcaatttcctctgatttcttcaatatgtctgcctgcattctttccatattttctttgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26427834 |
tctgcattctgctctattttcatcctctccttttgcagagtatcaatttcctctgatttcttcaatatgtctgcctgcattctttccatattttctttgc |
26427933 |
T |
|
| Q |
201 |
tttcagtctctagagctgaaattttgagcagtagaccttgctgcaaagcattaaatataaaaataacgaacacaatgtttgttgatattctgttaaataa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26427934 |
tttcagtctctagagctgaaattttgagcagtagaccttgctgcaaagcattaaatataaaaataacgaacacaatgtttgttgatattctgttaaataa |
26428033 |
T |
|
| Q |
301 |
agctgattaacgataataccatttggttctctgatgatgt |
340 |
Q |
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||||||||||||||||||||||||||||||| |||||||| |
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| T |
26428034 |
agctgattaacgataataccatttggttctccgatgatgt |
26428073 |
T |
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