View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14169_low_1 (Length: 1112)

Name: NF14169_low_1
Description: NF14169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14169_low_1
NF14169_low_1
[»] chr2 (10 HSPs)
chr2 (18-401)||(19137485-19137867)
chr2 (493-712)||(19137984-19138203)
chr2 (949-1103)||(19138361-19138515)
chr2 (873-951)||(17164592-17164670)
chr2 (782-872)||(19138273-19138360)
chr2 (873-951)||(36250577-36250655)
chr2 (873-925)||(19877507-19877559)
chr2 (873-951)||(32212942-32213020)
chr2 (403-444)||(19137889-19137930)
chr2 (873-953)||(24168198-24168278)
[»] chr3 (7 HSPs)
chr3 (873-951)||(24700097-24700175)
chr3 (873-951)||(8485965-8486043)
chr3 (875-951)||(27237964-27238040)
chr3 (890-951)||(54737170-54737231)
chr3 (873-951)||(47425146-47425224)
chr3 (873-924)||(32834615-32834666)
chr3 (873-917)||(25574666-25574710)
[»] chr5 (3 HSPs)
chr5 (873-945)||(17042198-17042270)
chr5 (874-953)||(7933407-7933486)
chr5 (874-953)||(34702904-34702982)
[»] chr8 (3 HSPs)
chr8 (872-951)||(19177952-19178030)
chr8 (873-953)||(28239295-28239375)
chr8 (882-951)||(12814983-12815053)
[»] chr4 (5 HSPs)
chr4 (873-951)||(5155502-5155580)
chr4 (873-953)||(17722293-17722373)
chr4 (873-951)||(51746198-51746276)
chr4 (873-951)||(2594448-2594526)
chr4 (873-950)||(17641348-17641425)
[»] scaffold0234 (1 HSPs)
scaffold0234 (873-951)||(6945-7023)
[»] chr6 (3 HSPs)
chr6 (880-945)||(16548292-16548357)
chr6 (874-951)||(16730436-16730513)
chr6 (873-951)||(21224552-21224629)
[»] chr7 (5 HSPs)
chr7 (873-951)||(8981547-8981625)
chr7 (871-951)||(7705932-7706012)
chr7 (873-951)||(31715307-31715385)
chr7 (873-953)||(26263058-26263138)
chr7 (873-953)||(32913690-32913770)
[»] chr1 (2 HSPs)
chr1 (873-953)||(21112740-21112819)
chr1 (873-953)||(21117482-21117562)


Alignment Details
Target: chr2 (Bit Score: 328; Significance: 0; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 18 - 401
Target Start/End: Original strand, 19137485 - 19137867
Alignment:
Q  18 ttcttgagcactgatttaagctttgttagttttgcaacttttgccatgttggaaagatgaagaaacaaagaggatataggtgtatgtgagaaagtgtaag 117  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  19137485 ttcttgagcactgatttaagctttgctagttttgcaacttttgccatgttggaaagttgaagaaacaaagaggatataggtgtatgtgagaaagtgtagg 19137584  T
Q  118 gaaggttcggttttggtttgtataaaaaggtagggagaagggtgaaatggtaataagcacctaattaagaaaaagatagtggcctaaacgatagttgtgt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19137585 gaaggttcggttttggtttgtataaaaaggtagggagaagggtgaaatggtaataagcacctaattaagaaaaagatagtggcctaaacgatagttgtgt 19137684  T
Q  218 ttttgtggcatttggactttagtgggtatgaattttgaaccgttgtttggtttgtctttgtcaacctttatatatttttctctctattattattaggtgt 317  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19137685 ttttgtggcctttggactttagtgggtgtgaattttgaaccgttgtttggtttgtctttgtcaacctttatatatttttctctctattattattaggtgt 19137784  T
Q  318 ctctagagctctttaggaagttcttttctataattaatgaataaatagtannnnnnnnnggtaactaatgtttaggtgatttgg 401  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||    
T  19137785 ctctcgagctctttaggaagttcttttctataattaatgaataaatagta-ttttttttggtaactaatgtttaggtgatttgg 19137867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 5e-90
Query Start/End: Original strand, 493 - 712
Target Start/End: Original strand, 19137984 - 19138203
Alignment:
Q  493 cagttttgtatagaaaaatatttctttttatataaactttgttggcatagattaa-gattttgtcttaatttggagtatgatgttgtagtaaatgtcgat 591  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| | ||||| |||||| |||||||||||||| |  |||||||||||||||||||    
T  19137984 cagttttgtattggaaaatatttctttttatataaactttgttggcaaatattaaagattttatcttaatttggagtgtt-tgttgtagtaaatgtcgat 19138082  T
Q  592 gtcttacttgtgtggcaagtatgattcatttcaccttgtccttgtattttatcagtgttgagttgctttgttggctagatggaaaatttagtacacttat 691  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19138083 gtcttacttgtgtggcaagtatgattcatttcaccttgtccttgtattttatcagtgttgagttgctttgttggctagatggaaaatttagtacacttat 19138182  T
Q  692 tcgaatactctattatatcaa 712  Q
    |||||||||  ||||||||||    
T  19138183 tcgaatactaaattatatcaa 19138203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 4e-72
Query Start/End: Original strand, 949 - 1103
Target Start/End: Original strand, 19138361 - 19138515
Alignment:
Q  949 tgatgaggttctaagcttcaccagaaaatctgcacactagttcccttctattagaatatgagtaatagagacattggtttgagagatgaggtctttaatg 1048  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19138361 tgatgaggttctaagcttcatcagaaaatctgcacgctagttcccttctattagaatatgagtaatagagacaatggtttgagagatgaggtctttaatg 19138460  T
Q  1049 tcttggattaaaactacatacacctgacaattcacaagggggccattgatgatgt 1103  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19138461 tcttggattaaaactacatacatctgacaattcacaagggggccattgatgatgt 19138515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 873 - 951
Target Start/End: Original strand, 17164592 - 17164670
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17164592 cactactacataaatgacatttcacatcggttgaaatcgacatttcacatcgggtggcaaccgatgtaactaaaggtga 17164670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 782 - 872
Target Start/End: Original strand, 19138273 - 19138360
Alignment:
Q  782 tactccatatggaaataagttcccgatacatcatcattccttagcagattgaggattctgaatgttacccatgaattagcaaactagaatc 872  Q
    ||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  19138273 tactccatatggaaataagttcccgatacatcat---tcctcagcagattgaggattctgaagattacccatgaattagcaaactagaatc 19138360  T

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Target: chr2; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 873 - 951
Target Start/End: Complemental strand, 36250655 - 36250577
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||||    
T  36250655 cactactacagaaatgacatttcacatcggttgaaatcgacatttcacatcgggtaccaaccgatgtaactaagggtga 36250577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 873 - 925
Target Start/End: Complemental strand, 19877559 - 19877507
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcgg 925  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  19877559 cactactacaaaaatgacatttcacatcggttgaaatcgacatttcacatcgg 19877507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 873 - 951
Target Start/End: Original strand, 32212942 - 32213020
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| ||||||||||||||||||||| || ||| ||||| ||| ||||||| |  ||||||||||||||||||||||    
T  32212942 cactactacagaaatgacatttcacatcagtggaattcgactttttacatcgggtcccaaccgatgtaactaaaggtga 32213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 403 - 444
Target Start/End: Original strand, 19137889 - 19137930
Alignment:
Q  403 atctcaaatgttcataatttaaaggacataaggtgaactaag 444  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19137889 atctcaaatgttcataatttaaaggacataaggtgaactaag 19137930  T

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Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 873 - 953
Target Start/End: Complemental strand, 24168278 - 24168198
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 953  Q
    |||||| | ||||||||||||||||||| || |||||| || ||||||||||| |  || | |||||||| ||||||||||    
T  24168278 cactactatagaaatgacatttcacatcagtggaaatcaacttttcacatcgggtcccaccagatgtaacgaaaggtgatg 24168198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 8e-27; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 873 - 951
Target Start/End: Original strand, 24700097 - 24700175
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  24700097 cactactacagaaatgacatttcacatcggttgaaatcgacatttcacatcggtttccaaccgatgtaactaaaggtga 24700175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 873 - 951
Target Start/End: Original strand, 8485965 - 8486043
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||||    
T  8485965 cactactacaaaaatgacatttcacatcggttgaaatcgacatttcacatcgggtaccaaccgatgtaactaagggtga 8486043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 875 - 951
Target Start/End: Complemental strand, 27238040 - 27237964
Alignment:
Q  875 ctacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||| ||||||||||||| | |||||||||||||||||| ||| ||||| | ||||||||||||||||||| |||||    
T  27238040 ctactacagaaatgacatcttacatcggttgaaatcgacttttaacatcaggtggcaaccgatgtaactaagggtga 27237964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 890 - 951
Target Start/End: Original strand, 54737170 - 54737231
Alignment:
Q  890 catttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    ||||| |||||||||||||||||||||||||||||| |  |||||||||||||||| |||||    
T  54737170 cattttacatcggttgaaatcgacatttcacatcgggtaccaaccgatgtaactaagggtga 54737231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 873 - 951
Target Start/End: Complemental strand, 47425224 - 47425146
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| ||||||||||||||||||||| || |||||| || ||||||||||| |  || ||||||| |||||||||||    
T  47425224 cactactacagaaatgacatttcacatcagtggaaatcaacttttcacatcgggtcccagccgatgtgactaaaggtga 47425146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 873 - 924
Target Start/End: Original strand, 32834615 - 32834666
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcg 924  Q
    |||||| ||||||||||||||||||||||||  |||||||| ||||||||||    
T  32834615 cactactacagaaatgacatttcacatcggtcaaaatcgacttttcacatcg 32834666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 873 - 917
Target Start/End: Complemental strand, 25574710 - 25574666
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacattt 917  Q
    |||||| ||||||||||||||||||||| || |||||||||||||    
T  25574710 cactactacagaaatgacatttcacatcagtggaaatcgacattt 25574666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 1e-25; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 873 - 945
Target Start/End: Original strand, 17042198 - 17042270
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaa 945  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  17042198 cactactacagaaatgacatttcacatcggttgaaatcgacatttcacatcgggtgccaaccgatgtaactaa 17042270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 874 - 953
Target Start/End: Original strand, 7933407 - 7933486
Alignment:
Q  874 actacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 953  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||||||||| |   ||||||||| ||||||| |||||    
T  7933407 actactacagaaatgacatttcacatcggttggaatcgatatttcacatcgggtcctaaccgatgtcactaaagatgatg 7933486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 874 - 953
Target Start/End: Complemental strand, 34702982 - 34702904
Alignment:
Q  874 actacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 953  Q
    ||||||||||||||||||||||||||| | | | || ||| ||||||||||| |  || |||||||||||||||| ||||    
T  34702982 actacaacagaaatgacatttcacatctg-taatattgacttttcacatcggttcccagccgatgtaactaaaggcgatg 34702904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 1e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 872 - 951
Target Start/End: Original strand, 19177952 - 19178030
Alignment:
Q  872 ccactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||    
T  19177952 ccactactacagaaatgacatttcacatcggttgaaatcgacatttcacatcgg-taccaaccgatgtaattaaaggtga 19178030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 873 - 953
Target Start/End: Original strand, 28239295 - 28239375
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 953  Q
    |||||| ||| ||||||||||||||||| || ||||| ||||||||||||||| |  |||||||||| |||||||||||||    
T  28239295 cactactacataaatgacatttcacatcagtggaaattgacatttcacatcgggtcccaaccgatgtcactaaaggtgatg 28239375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 882 - 951
Target Start/End: Original strand, 12814983 - 12815053
Alignment:
Q  882 agaaatgacatttcacatcggttgaaatcgacattt-cacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||||| ||||||||||  ||||||||||| ||| |||||||| || || |||||||||||||||||||    
T  12814983 agaaatgagatttcacatcacttgaaatcgactttttcacatcgggtgacacccgatgtaactaaaggtga 12815053  T

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Target: chr4 (Bit Score: 55; Significance: 5e-22; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 873 - 951
Target Start/End: Original strand, 5155502 - 5155580
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| ||||||||||||||||||||| || ||||||||||||||||||||| |  ||||||||||||||||||||||    
T  5155502 cactactacagaaatgacatttcacatcagtggaaatcgacatttcacatcgggtcccaaccgatgtaactaaaggtga 5155580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 873 - 953
Target Start/End: Original strand, 17722293 - 17722373
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 953  Q
    |||||| ||||||||||||||||||||||||||||||| || ||| ||||||| || ||||||||||| ||||||||||||    
T  17722293 cactactacagaaatgacatttcacatcggttgaaatcaacttttaacatcgggtgccaaccgatgtacctaaaggtgatg 17722373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 873 - 951
Target Start/End: Complemental strand, 51746276 - 51746198
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| |||||||||||||||||||||||| |||| |||| ||||||||||| |  | ||||||||||||||||||||    
T  51746276 cactactacagaaatgacatttcacatcggtggaaaacgacttttcacatcgggtccctaccgatgtaactaaaggtga 51746198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 873 - 951
Target Start/End: Original strand, 2594448 - 2594526
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| ||||||||||||||||||||| || ||| ||||| ||| ||||||| |  ||||||||||||||||||||||    
T  2594448 cactactacagaaatgacatttcacatcagtggaattcgactttttacatcgggtcccaaccgatgtaactaaaggtga 2594526  T

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Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 873 - 950
Target Start/End: Original strand, 17641348 - 17641425
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtg 950  Q
    |||||| ||| ||||||||| |||||||||||| ||| ||||||||||||||| |   ||||||||| ||||||||||    
T  17641348 cactactacataaatgacatctcacatcggttggaattgacatttcacatcgggtcctaaccgatgtcactaaaggtg 17641425  T

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Target: scaffold0234 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 873 - 951
Target Start/End: Complemental strand, 7023 - 6945
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||||||||| |  |||||||||||||||| |||||    
T  7023 cactactacagaaatgacatttcacatcgattgaaattgacatttcacatcgggtaccaaccgatgtaactaagggtga 6945  T

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Target: chr6 (Bit Score: 46; Significance: 1e-16; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 880 - 945
Target Start/End: Original strand, 16548292 - 16548357
Alignment:
Q  880 acagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaa 945  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| |  ||||||||||||||||    
T  16548292 acagaaatgacatttcacattagttgaaatcgacatttcacatcgggtaccaaccgatgtaactaa 16548357  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 874 - 951
Target Start/End: Complemental strand, 16730513 - 16730436
Alignment:
Q  874 actacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    ||||| ||||||||||||||| ||||| || ||||||||| |||||||| || |  || |||||||||||||||||||    
T  16730513 actactacagaaatgacatttaacatcagtggaaatcgacttttcacattgggtcccagccgatgtaactaaaggtga 16730436  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 873 - 951
Target Start/End: Original strand, 21224552 - 21224629
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| ||||||||||||||| ||||| || ||||||||| ||||||||||| |  || ||||||| |||||||||||    
T  21224552 cactactacagaaatgacatttaacatcagtggaaatcgacttttcacatcgggtcccacccgatgt-actaaaggtga 21224629  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 873 - 951
Target Start/End: Original strand, 8981547 - 8981625
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| |  |||| |||||| ||||||||||    
T  8981547 cactactacagaaatgacattccacatcggttggaatcgacttttcacatcgggtcccaacggatgtagctaaaggtga 8981625  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 871 - 951
Target Start/End: Original strand, 7705932 - 7706012
Alignment:
Q  871 tccactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||||| |||||||| |||||||||||| || ||||| ||||||||||||||| |  || ||||||| |||||||||||    
T  7705932 tccactactacagaaatcacatttcacatcagtggaaattgacatttcacatcgggtcccagccgatgtgactaaaggtga 7706012  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 873 - 951
Target Start/End: Complemental strand, 31715385 - 31715307
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 951  Q
    |||||| ||| ||||||||||||||||| ||  || ||||| ||||||||||| |  ||||||||||||||||||||||    
T  31715385 cactactacaaaaatgacatttcacatcagtgaaattcgacttttcacatcggatcccaaccgatgtaactaaaggtga 31715307  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 873 - 953
Target Start/End: Original strand, 26263058 - 26263138
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 953  Q
    |||||| ||| |||||| |||||||||| || ||||||||| |||||||| || |  || |||||||||||||||||||||    
T  26263058 cactactacataaatgaaatttcacatcagtggaaatcgacttttcacattgggtcccacccgatgtaactaaaggtgatg 26263138  T

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Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 873 - 953
Target Start/End: Original strand, 32913690 - 32913770
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 953  Q
    |||||| ||||||||||||||||||||  || ||| ||||| ||||| ||||| |  || |||||||||||||||||||||    
T  32913690 cactactacagaaatgacatttcacattagtggaattcgacttttcaaatcggatcccacccgatgtaactaaaggtgatg 32913770  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000006; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 873 - 953
Target Start/End: Original strand, 21112740 - 21112819
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 953  Q
    |||||| ||||||||||||||| ||||| || |||||| || ||||||||||| |  || ||||||| |||||||||||||    
T  21112740 cactactacagaaatgacatttaacatcagtggaaatcaacttttcacatcgg-tcccacccgatgtcactaaaggtgatg 21112819  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 873 - 953
Target Start/End: Original strand, 21117482 - 21117562
Alignment:
Q  873 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 953  Q
    |||||| |||||||||| |||| ||||| || |||||| || ||||||||||| |  || ||||||| |||||||||||||    
T  21117482 cactactacagaaatgatatttaacatcagtggaaatcaacttttcacatcgggtcccacccgatgtcactaaaggtgatg 21117562  T

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