View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14169_low_8 (Length: 242)
Name: NF14169_low_8
Description: NF14169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14169_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 3050383 - 3050614
Alignment:
| Q |
1 |
cttccaaagatgttatggaacaattgtcacagttattcagtactcttgatctaggtctcatgtagtcaaatgtagcttcaattgtggtcacattgcaatc |
100 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3050383 |
cttccaaagatgttatggaacaatggtcacagttattcagtacacttgatctaggtctcatgtagtcaaatgtagcttcaattgtggtcacattgcaatc |
3050482 |
T |
|
| Q |
101 |
attgagacatctacaaccttgatgtcccagcctagatcacaaggatagaaggaacacagtctctaggaagatgaaattttacttttgtttttatgcaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3050483 |
attgagacatctacaaccttgatgtcccagcctagatcacaaggatagaaggaacacagtctctaggaagatgaaattttacttttgtttttatgcaatg |
3050582 |
T |
|
| Q |
201 |
tgtattaagcatcagtgaagttagatattctt |
232 |
Q |
| |
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|||||||||||||||||||||||||| ||||| |
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| T |
3050583 |
tgtattaagcatcagtgaagttagattttctt |
3050614 |
T |
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