View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1416_low_7 (Length: 240)
Name: NF1416_low_7
Description: NF1416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1416_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 15115798 - 15115587
Alignment:
| Q |
12 |
cataggtgtaatcatattcgtaatcgttgcagggttttctcatgcaaatacatcaaacttgacaccttttttaccttatggagttaaaggtgtatttcaa |
111 |
Q |
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| T |
15115798 |
cataggtgtaatcatattcgtaatcgttgcaggattttctcatgcaaatacatcaaacttgacaccttttttaccttatggagttaaaggtgtatttcaa |
15115699 |
T |
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| Q |
112 |
gcatctgcaattctatattttgcatatggagggtttgacagtcttgcaaccatggctgaagaaactaaaaatccgccaaaggacataccaataggcttga |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15115698 |
gcatctgcaattctatattttgcatatggagggtttgacagtcttgcaaccatggctgaagaaactaaaaatccgccaaaggacataccaataggcttga |
15115599 |
T |
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| Q |
212 |
ttggttcaatgt |
223 |
Q |
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|||||||||||| |
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| T |
15115598 |
ttggttcaatgt |
15115587 |
T |
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