View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14171_low_9 (Length: 325)

Name: NF14171_low_9
Description: NF14171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14171_low_9
NF14171_low_9
[»] chr2 (38 HSPs)
chr2 (209-312)||(3371108-3371211)
chr2 (1-144)||(3371276-3371420)
chr2 (1-118)||(29683439-29683557)
chr2 (244-312)||(3345341-3345409)
chr2 (1-118)||(12806814-12806932)
chr2 (1-118)||(2395157-2395275)
chr2 (1-118)||(14379378-14379496)
chr2 (1-118)||(18369013-18369131)
chr2 (1-118)||(19204592-19204710)
chr2 (1-118)||(30432860-30432978)
chr2 (5-118)||(37609224-37609338)
chr2 (1-118)||(41594216-41594334)
chr2 (1-50)||(7877393-7877442)
chr2 (1-50)||(7877589-7877638)
chr2 (1-118)||(13572472-13572589)
chr2 (1-118)||(33940681-33940799)
chr2 (1-118)||(18369278-18369395)
chr2 (1-78)||(41593992-41594069)
chr2 (1-48)||(19204857-19204904)
chr2 (1-50)||(3948433-3948482)
chr2 (1-50)||(6880042-6880091)
chr2 (1-50)||(6880238-6880287)
chr2 (4-78)||(10748535-10748609)
chr2 (1-50)||(10748759-10748808)
chr2 (1-94)||(14379137-14379231)
chr2 (1-50)||(28921262-28921311)
chr2 (1-50)||(28921458-28921507)
chr2 (1-50)||(38873541-38873590)
chr2 (1-49)||(3371567-3371615)
chr2 (1-49)||(12806619-12806667)
chr2 (8-50)||(3948636-3948678)
chr2 (1-47)||(4171597-4171643)
chr2 (4-50)||(4171793-4171839)
chr2 (1-47)||(37609028-37609074)
chr2 (1-50)||(6164163-6164212)
chr2 (1-50)||(32521544-32521593)
chr2 (1-50)||(33940942-33940991)
chr2 (1-49)||(32521740-32521788)
[»] scaffold0817 (2 HSPs)
scaffold0817 (1-118)||(3983-4101)
scaffold0817 (1-118)||(4247-4365)
[»] chr4 (26 HSPs)
chr4 (1-118)||(13683004-13683122)
chr4 (1-118)||(37815341-37815459)
chr4 (1-118)||(17107432-17107550)
chr4 (1-118)||(5720953-5721070)
chr4 (1-118)||(16960029-16960147)
chr4 (1-118)||(17865241-17865359)
chr4 (1-118)||(43749947-43750065)
chr4 (1-118)||(37815606-37815725)
chr4 (1-118)||(989340-989458)
chr4 (1-50)||(2184659-2184708)
chr4 (1-50)||(4712443-4712492)
chr4 (1-118)||(16491647-16491765)
chr4 (1-118)||(22487220-22487338)
chr4 (1-48)||(12792837-12792884)
chr4 (1-48)||(43750212-43750259)
chr4 (1-46)||(4712252-4712297)
chr4 (1-50)||(17865045-17865094)
chr4 (1-118)||(26314740-26314858)
chr4 (1-50)||(46480986-46481035)
chr4 (1-48)||(20046067-20046114)
chr4 (1-50)||(9301834-9301883)
chr4 (1-50)||(13493149-13493198)
chr4 (1-50)||(16959833-16959882)
chr4 (1-50)||(22487485-22487534)
chr4 (1-50)||(32592812-32592861)
chr4 (1-49)||(46081639-46081687)
[»] chr5 (24 HSPs)
chr5 (1-117)||(4122842-4122959)
chr5 (1-118)||(3598413-3598531)
chr5 (1-118)||(10461610-10461728)
chr5 (1-117)||(18786246-18786362)
chr5 (1-94)||(3598678-3598772)
chr5 (1-118)||(24491108-24491226)
chr5 (1-118)||(43197166-43197284)
chr5 (1-118)||(5933390-5933508)
chr5 (1-118)||(6542524-6542641)
chr5 (1-118)||(22394124-22394242)
chr5 (1-48)||(4122648-4122695)
chr5 (1-48)||(6497263-6497310)
chr5 (1-48)||(10461416-10461463)
chr5 (1-48)||(15969695-15969742)
chr5 (1-50)||(15969499-15969548)
chr5 (1-50)||(18786050-18786099)
chr5 (1-50)||(22394389-22394438)
chr5 (1-118)||(41137141-41137259)
chr5 (1-117)||(14868938-14869054)
chr5 (8-94)||(43196925-43197012)
chr5 (1-50)||(6542328-6542377)
chr5 (1-50)||(7133390-7133439)
chr5 (1-50)||(14868742-14868791)
chr5 (1-50)||(24490912-24490961)
[»] chr3 (25 HSPs)
chr3 (1-118)||(27284970-27285088)
chr3 (1-118)||(52835545-52835663)
chr3 (1-118)||(26582877-26582995)
chr3 (1-118)||(27934451-27934569)
chr3 (1-118)||(33162585-33162703)
chr3 (9-118)||(38807811-38807921)
chr3 (1-118)||(50645737-50645855)
chr3 (1-117)||(38807539-38807656)
chr3 (1-118)||(14546101-14546219)
chr3 (1-118)||(29838559-29838677)
chr3 (1-118)||(46962847-46962965)
chr3 (1-118)||(49499843-49499961)
chr3 (1-78)||(49500108-49500185)
chr3 (1-48)||(32315447-32315494)
chr3 (1-50)||(889197-889246)
chr3 (1-118)||(7029385-7029503)
chr3 (1-50)||(17109920-17109969)
chr3 (1-50)||(46962651-46962700)
chr3 (1-118)||(50645472-50645590)
chr3 (1-117)||(16056350-16056466)
chr3 (1-48)||(52835810-52835857)
chr3 (1-76)||(42093438-42093513)
chr3 (1-50)||(21323153-21323202)
chr3 (1-48)||(14545906-14545954)
chr3 (1-49)||(29838364-29838412)
[»] chr1 (26 HSPs)
chr1 (1-118)||(20062063-20062181)
chr1 (1-118)||(26244549-26244667)
chr1 (1-118)||(50096133-50096251)
chr1 (1-118)||(20061798-20061916)
chr1 (1-118)||(37172513-37172631)
chr1 (1-118)||(39027481-39027599)
chr1 (1-118)||(47828963-47829080)
chr1 (1-94)||(33822-33916)
chr1 (1-118)||(14602010-14602128)
chr1 (1-118)||(28031912-28032030)
chr1 (1-118)||(43191656-43191774)
chr1 (1-50)||(50096398-50096447)
chr1 (1-50)||(50624835-50624884)
chr1 (1-50)||(50625031-50625080)
chr1 (1-48)||(26244814-26244861)
chr1 (1-50)||(10914039-10914088)
chr1 (1-118)||(28031647-28031765)
chr1 (1-118)||(33619161-33619279)
chr1 (1-50)||(42154819-42154868)
chr1 (1-50)||(42155015-42155064)
chr1 (1-50)||(43191921-43191970)
chr1 (1-118)||(33557-33675)
chr1 (1-50)||(10913843-10913892)
chr1 (1-118)||(18963609-18963727)
chr1 (1-49)||(14602275-14602323)
chr1 (1-49)||(47829227-47829275)
[»] chr8 (21 HSPs)
chr8 (1-118)||(220513-220630)
chr8 (1-118)||(689668-689785)
chr8 (1-118)||(734136-734253)
chr8 (1-118)||(858032-858149)
chr8 (1-118)||(6943657-6943775)
chr8 (1-118)||(13154239-13154357)
chr8 (1-118)||(31186374-31186492)
chr8 (1-114)||(26479559-26479673)
chr8 (1-50)||(31186638-31186687)
chr8 (1-49)||(18764550-18764598)
chr8 (1-48)||(6891849-6891896)
chr8 (1-116)||(31685672-31685788)
chr8 (1-118)||(9180310-9180428)
chr8 (1-50)||(13154504-13154553)
chr8 (1-50)||(13405713-13405762)
chr8 (1-50)||(24332331-24332380)
chr8 (1-50)||(31685936-31685985)
chr8 (1-49)||(24332527-24332574)
chr8 (1-48)||(3272985-3273032)
chr8 (1-50)||(2835194-2835243)
chr8 (1-50)||(31403178-31403227)
[»] chr7 (23 HSPs)
chr7 (1-118)||(42516867-42516985)
chr7 (1-118)||(13426557-13426675)
chr7 (1-118)||(42517132-42517250)
chr7 (3-118)||(34595586-34595702)
chr7 (1-50)||(19157762-19157811)
chr7 (1-118)||(19157958-19158076)
chr7 (1-50)||(20757161-20757210)
chr7 (1-118)||(20757357-20757475)
chr7 (1-118)||(22364916-22365034)
chr7 (1-118)||(44219559-44219677)
chr7 (1-49)||(19476659-19476707)
chr7 (1-49)||(40729133-40729181)
chr7 (1-118)||(24356-24474)
chr7 (1-50)||(24621-24670)
chr7 (5-94)||(40729332-40729422)
chr7 (1-118)||(44219294-44219412)
chr7 (1-118)||(44483491-44483609)
chr7 (1-49)||(829946-829994)
chr7 (1-49)||(1195126-1195174)
chr7 (1-49)||(19476465-19476513)
chr7 (1-117)||(22954596-22954713)
chr7 (1-50)||(31579500-31579549)
chr7 (1-50)||(35026709-35026758)
[»] chr6 (24 HSPs)
chr6 (1-118)||(3345284-3345402)
chr6 (1-118)||(8926187-8926305)
chr6 (1-118)||(8936444-8936562)
chr6 (1-94)||(17238299-17238393)
chr6 (1-117)||(33783662-33783780)
chr6 (3-118)||(8926456-8926572)
chr6 (3-118)||(8936713-8936829)
chr6 (1-118)||(3484783-3484902)
chr6 (1-118)||(5923826-5923945)
chr6 (1-118)||(19661614-19661732)
chr6 (1-78)||(30608907-30608984)
chr6 (1-50)||(29819455-29819504)
chr6 (1-49)||(3345090-3345138)
chr6 (1-49)||(16525458-16525506)
chr6 (3-118)||(26272247-26272363)
chr6 (1-50)||(19661418-19661467)
chr6 (1-50)||(28853554-28853603)
chr6 (1-118)||(30609131-30609249)
chr6 (1-50)||(31717244-31717293)
chr6 (1-50)||(31717440-31717489)
chr6 (1-48)||(3485039-3485086)
chr6 (1-50)||(28853750-28853799)
chr6 (58-117)||(5404601-5404661)
chr6 (1-49)||(5924092-5924140)
[»] scaffold0170 (2 HSPs)
scaffold0170 (1-118)||(8541-8660)
scaffold0170 (1-115)||(8807-8922)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-118)||(212677-212795)
scaffold0006 (1-118)||(212412-212530)
[»] scaffold0147 (1 HSPs)
scaffold0147 (1-50)||(25192-25241)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-50)||(36834-36883)
[»] scaffold0103 (2 HSPs)
scaffold0103 (1-49)||(43347-43395)
scaffold0103 (1-50)||(43543-43592)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-50)||(4652-4701)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-50)||(74179-74228)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-118)||(118029-118147)
scaffold0021 (1-50)||(118297-118346)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-49)||(36259-36307)


Alignment Details
Target: chr2 (Bit Score: 104; Significance: 8e-52; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 3371211 - 3371108
Alignment:
Q  209 acctttagcaatgatgtatacaataataaaagtttatttcagatagagcatgagttgagttttccatggtttgctcgtttgaatcatttagaacacagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3371211 acctttagcaatgatgtatacaataataaaagtttatttcagatagagcatgagttgagttttccatggtttgctcgtttgaatcatttagaacacagaa 3371112  T
Q  309 tgtg 312  Q
    ||||    
T  3371111 tgtg 3371108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 3371420 - 3371276
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||| |||| ||||||| || |||| |||||||||       ||||||||| ||||||||||| |||| || ||||||||||  |    
T  3371420 aaataccaaggaccaaaactaaatattctatatttgcaggaactaaaaccaaaaaaatatttttacagggactaaaaccaaaacgccagatatttacctg 3371321  T
Q  100 gatcatttccatatttaagggagatagtttttgtggaaagtgtta 144  Q
    || ||||||||||||||||||||||||||||| ||||||||||||    
T  3371320 gaccatttccatatttaagggagatagtttttatggaaagtgtta 3371276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29683439 - 29683557
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  29683439 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaatcaaaatgtcagatatttgcagg 29683538  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||||||||||||||    
T  29683539 gactatttccatatttaag 29683557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 3345409 - 3345341
Alignment:
Q  244 atttcagatagagcatgagttgagttttccatggtttgctcgtttgaatcatttagaacacagaatgtg 312  Q
    ||||||||||||||| ||||| ||||||||||||||||||||  || ||||||||||||||||||||||    
T  3345409 atttcagatagagcacgagttaagttttccatggtttgctcgcatggatcatttagaacacagaatgtg 3345341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12806814 - 12806932
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||||||||||| |||| || ||| ||||||||||       |||||||||||||||||||| |||||||  |||||||| | ||    
T  12806814 aaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaatatttttacggggactaaaaccaaaatgttagatatttgcagg 12806913  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  12806914 gacaattttcatatttaag 12806932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 2395275 - 2395157
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||| |||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| ||||| || |||||||| | |     
T  2395275 aaataccaaggactaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagt 2395176  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  2395175 gaccatttccatatttaag 2395157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14379378 - 14379496
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||| |||||||||| ||||||  || || |||||||||||       ||||||||  |||||||||| ||||| ||||||||||| | ||    
T  14379378 aaataccaaggacaaaaaccaaatattctatttttgcaaggactaaaaccaaaaaaatatttttatagggactaaaaccaaaacgcaagatatttgcagg 14379477  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  14379478 gaccatttccatatttaag 14379496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18369131 - 18369013
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||| ||||||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  18369131 aaataccaaagaccaaaaccaaattttttatatttgcagggactaaaacccaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 18369032  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  18369031 gactattttcatatttaag 18369013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19204710 - 19204592
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||   ||||||||| ||||| || | |||||| | ||    
T  19204710 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttataaggactaaaatcaaaacgctaaatatttgcagg 19204611  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  19204610 gaccatttccatatttaag 19204592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30432860 - 30432978
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| ||| |||||||||||||  ||||||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  30432860 aaataacaaagaccaaaaccaaaaattctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgccgg 30432959  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  30432960 gaccatttccatatttaag 30432978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 37609224 - 37609338
Alignment:
Q  5 accaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggggatc 103  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| ||||| || |||||||| |  ||| |    
T  37609224 accaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttagagggactaaaaccaaaacgccagatatttgcaaggacc 37609323  T
Q  104 atttccatatttaag 118  Q
    |||||||||||||||    
T  37609324 atttccatatttaag 37609338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41594216 - 41594334
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| ||| |||||||||||||| || |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  41594216 aaatatcaatgaccaaaaccaaatattttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 41594315  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  41594316 gaccatttccatatttaag 41594334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7877442 - 7877393
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  7877442 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc 7877393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7877589 - 7877638
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  7877589 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 7877638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13572589 - 13572472
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||  ||||||| || |||||||||||| |       ||||||||  ||||||||||| |||| || |||||||| | ||    
T  13572589 aaataccaaggaccaaaaccaaacattctatatttgcagggactaaaa-caaaaaaatatttttatagggactaaaactaaaacgccagatatttgcagg 13572491  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  13572490 gaccatttccatatttaag 13572472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33940799 - 33940681
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| ||||||||||||||||||||| |||| || |||| ||||||||        ||||||||| |||||||||| ||||||| ||||||||| | ||    
T  33940799 aaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaactaaaaaaatatttttacagggactaaaatcaaaatgtaagatatttgcagg 33940700  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  33940699 gactattttcatatttaag 33940681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18369278 - 18369395
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| ||| |||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  18369278 aaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagg 18369376  T
Q  100 gatcatttccatatttaag 118  Q
     ||||||||||||||||||    
T  18369377 tatcatttccatatttaag 18369395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41594069 - 41593992
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac 78  Q
    ||||| |||||||||||||||||||||||||| || |||| |||||||||       ||||||||| |||||||||||    
T  41594069 aaatatcaaggaccaaaaccaaattttctatatttgcaggaactaaaaccaaaaaaatatttttacagggactaaaac 41593992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19204857 - 19204904
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||    
T  19204857 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 19204904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3948482 - 3948433
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||| |||||||||||| |||| || ||||||||||||||    
T  3948482 aaataccaaggaccgaaaccaaattttttatatttgcagggactaaaacc 3948433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6880091 - 6880042
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||| |||||||| |||| || ||||||||||||||    
T  6880091 aaataccaaggaccaaaatcaaattttttatatttgcagggactaaaacc 6880042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6880238 - 6880287
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || ||| ||||||||||    
T  6880238 aaataccaaggaccaaaaccaaatattctatatttgcagagactaaaacc 6880287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 10748609 - 10748535
Alignment:
Q  4 taccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac 78  Q
    |||||||||||||||||||||||| |||| || |||||| |||||||       ||||||||| |||||||||||    
T  10748609 taccaaggaccaaaaccaaattttttatatttgcagggattaaaaccaaaaaaatatttttacagggactaaaac 10748535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10748759 - 10748808
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||| |||||||||||||| ||||||| |||| ||||||||||||    
T  10748759 aaataccaatgaccaaaaccaaatattctatatttactgggactaaaacc 10748808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14379231 - 14379137
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatattt 94  Q
    |||||| |||||||||||||||||||| || | || ||||||||||||||       ||||||||| |||||||||| |||||||  ||||||||    
T  14379231 aaatacaaaggaccaaaaccaaattttttacatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatattt 14379137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28921311 - 28921262
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||| ||||| ||||||| || ||||||||||||||    
T  28921311 aaataccaaggaccaaaatcaaatattctatatttgcagggactaaaacc 28921262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28921458 - 28921507
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||| ||||||||||||||||||||| |||| || ||||||||||||||    
T  28921458 aaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaacc 28921507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38873590 - 38873541
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || || |||||||||||    
T  38873590 aaataccaaggaccaaaaccaaatattctatatttgcaaggactaaaacc 38873541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3371567 - 3371615
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||||||||| |||||||||||||| |||| || |||||||||||||    
T  3371567 aaataccaaggatcaaaaccaaattttttatatttgcagggactaaaac 3371615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12806667 - 12806619
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||||||||| ||||||||||| ||||||| || |||||||||||||    
T  12806667 aaataccaaggatcaaaaccaaatattctatatttgcagggactaaaac 12806619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 3948636 - 3948678
Alignment:
Q  8 aaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||| ||||||| || ||||||||||||||    
T  3948636 aaggaccaaaaccaaatattctatatttgcagggactaaaacc 3948678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4171643 - 4171597
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaa 47  Q
    ||||||||| |||||||||||||| ||||||| || |||||||||||    
T  4171643 aaataccaaagaccaaaaccaaatgttctatatttgcagggactaaa 4171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 4171793 - 4171839
Alignment:
Q  4 taccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| |||| || | ||||||||||||    
T  4171793 taccaaggaccaaaaccaaattttttatatttgctgggactaaaacc 4171839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37609074 - 37609028
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaa 47  Q
    ||||||||||||||||||||||||||| |||| || || ||||||||    
T  37609074 aaataccaaggaccaaaaccaaattttttatatttgcaaggactaaa 37609028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6164163 - 6164212
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||| ||||||||||||||||| ||||||| || | ||||||||||||    
T  6164163 aaatactaaggaccaaaaccaaatattctatatttgctgggactaaaacc 6164212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32521593 - 32521544
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||| |||||||||||||| || |||| ||||| |||||||||||    
T  32521593 aaataccaaagaccaaaaccaaatattttatatttacaaggactaaaacc 32521544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33940942 - 33940991
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||| ||| |||||||||||||| ||||||| || ||||||||||||||    
T  33940942 aaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaacc 33940991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32521740 - 32521788
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    ||||| ||||||||||||||||||||| |||| || |||||| ||||||    
T  32521740 aaatatcaaggaccaaaaccaaattttttatatttgcagggattaaaac 32521788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4101 - 3983
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  4101 aaataccaaggaccaaaaccaaattttctatatttacagggactaaaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagg 4002  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  4001 gaccatttccatatttaag 3983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4247 - 4365
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  4247 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 4346  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  4347 gactattttcatatttaag 4365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13683122 - 13683004
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||       ||||||||  |||||||||| |||||||  |||||||| | ||    
T  13683122 aaataccaaggaccaaaaccaaatattctatatttacagggactaaaaccaaaaaaatatttttatagggactaaaaccaaaatgtcagatatttgcagg 13683023  T
Q  100 gatcatttccatatttaag 118  Q
    |||||||||||||||||||    
T  13683022 gatcatttccatatttaag 13683004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 37815459 - 37815341
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || || |||||||||||       ||||||||  |||||||||  |||||||| |||||||||| ||    
T  37815459 aaataccaaggaccaaaaccaaatattctatatttgcatggactaaaaccaaaaaaatatttttatagggactaaatccaaaatgccagatatttacagg 37815360  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  37815359 gaccatttccatatttaag 37815341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 17107550 - 17107432
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       |||||| || ||||||||||| |||| || | |||||| | ||    
T  17107550 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatattttaacagggactaaaactaaaacgccaaatattttcagg 17107451  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  17107450 gaccatttccatatttaag 17107432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5721070 - 5720953
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  5721070 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagg 5720972  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  5720971 gaccatttccatatttaag 5720953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16960029 - 16960147
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    |||||| ||||| ||||||||||| ||||||  || || |||||||||||       ||||||||  ||||||||||| |||||||||||||||| | ||    
T  16960029 aaatactaaggatcaaaaccaaatattctatttttgcaaggactaaaaccaaaaaaatatttttatagggactaaaaccaaaatgcaagatatttgcagg 16960128  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  16960129 gaccatttccatatttaag 16960147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17865241 - 17865359
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||| ||||||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  17865241 aaataccaaagaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 17865340  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  17865341 gactattttcatatttaag 17865359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 43750065 - 43749947
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  || ||||||| |||||  | |||||||| | ||    
T  43750065 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttataggaactaaaatcaaaacaccagatatttgcagg 43749966  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  43749965 gaccatttccatatttaag 43749947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 37815606 - 37815725
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc-nnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacgg 98  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||        ||||||||| |||||||||| |||||||  |||||||| | |    
T  37815606 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgctg 37815705  T
Q  99 ggatcatttccatatttaag 118  Q
    |||  |||| ||||||||||    
T  37815706 ggacaattttcatatttaag 37815725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 989340 - 989458
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||| |||||||||||||| |||||||  | ||||||||||||||       ||||||||  |||||||||| ||||| |  |||||||| | ||    
T  989340 aaataccaaagaccaaaaccaaatattctatatctgcagggactaaaaccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagg 989439  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  989440 gaccatttccatatttaag 989458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2184659 - 2184708
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  2184659 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 2184708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4712443 - 4712492
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  4712443 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc 4712492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16491765 - 16491647
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || |||||| |||||||       ||||||||  || |||||||  ||||||| ||||||||||  |    
T  16491765 aaataccaaggaccaaaaccaaatattctatatttgcagggattaaaaccaaaaaaatatttttataggaactaaaattaaaatgccagatatttacaag 16491666  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||| ||||||||||    
T  16491665 gaccattttcatatttaag 16491647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22487338 - 22487220
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||| |||||||| |       ||||||||   ||||||||| |||||  | |||||||| ||||    
T  22487338 aaataccaaggaccaaaaccaaatattctatatttgcagagactaaaaacaaaaaaatatttttataaggactaaaaccaaaacaccagatatttgcggg 22487239  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  22487238 gaccatttccatatttaag 22487220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12792837 - 12792884
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||    
T  12792837 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 12792884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43750212 - 43750259
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||    
T  43750212 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 43750259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4712297 - 4712252
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaa 46  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||    
T  4712297 aaataccaaggaccaaaaccaaatattctatatttgcagggactaa 4712252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17865094 - 17865045
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||| |||||||||||||||||| ||||||| || ||||||||||||||    
T  17865094 aaatatcaaggaccaaaaccaaatattctatatttgcagggactaaaacc 17865045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26314740 - 26314858
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||| | ||||||||| ||||||| || ||||||||||||||       ||||||||  |||| ||||| ||||| || |||||||| |  |    
T  26314740 aaataccaaggatctaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagggattaaaaccaaaacgccagatatttgccag 26314839  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  26314840 gaacatttccatatttaag 26314858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46481035 - 46480986
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| ||  |||||||||||||    
T  46481035 aaataccaaggaccaaaaccaaatattctatatttgtagggactaaaacc 46480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20046067 - 20046114
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    ||||| ||||||||||||||||||||| |||| | |||||||||||||    
T  20046067 aaatagcaaggaccaaaaccaaattttttatattgacagggactaaaa 20046114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9301834 - 9301883
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||| ||||| ||||||| || || |||||||||||    
T  9301834 aaataccaaggaccaaaatcaaatattctatatttgcatggactaaaacc 9301883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13493149 - 13493198
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||| ||| ||||||||||| ||||||| || ||||||||||||||    
T  13493149 aaataccatggatcaaaaccaaatattctatatttgcagggactaaaacc 13493198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16959882 - 16959833
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||| |||||||||||||||||||| |||| || || |||||||||||    
T  16959882 aaatacaaaggaccaaaaccaaattttttatatttgcatggactaaaacc 16959833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22487485 - 22487534
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||||||  ||| || || |||||||||||    
T  22487485 aaataccaaggaccaaaaccaaatttttcatatttgcaaggactaaaacc 22487534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32592861 - 32592812
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||| ||||||||||||||||| ||| |||| || ||||||||||||||    
T  32592861 aaatatcaaggaccaaaaccaaaatttttatatttgcagggactaaaacc 32592812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46081639 - 46081687
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||||||||||||||||||||| ||||||| || |||  ||||||||    
T  46081639 aaataccaaggaccaaaaccaaatattctatatttgcagaaactaaaac 46081687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4122842 - 4122959
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||||       ||||||||  |||||||||| ||||| || ||||||||||| |    
T  4122842 aaatatcaaggaccaaaaccaaatattctatatttacagggactaaaaccaaaaaaatatttttatagggactaaaagcaaaacgccagatatttacgag 4122941  T
Q  100 gatcatttccatatttaa 117  Q
    || |||||||||||||||    
T  4122942 gaacatttccatatttaa 4122959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3598531 - 3598413
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||| |||||||||  |||||||  |||||||| | ||    
T  3598531 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaatccaaaatgtcagatatttgcagg 3598432  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||| ||||||||||    
T  3598431 gaccattttcatatttaag 3598413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 10461610 - 10461728
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||| |||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  10461610 aaataccaatgaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagg 10461709  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  10461710 gaccatttccatatttaag 10461728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18786246 - 18786362
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || || |||||||||||       ||||||||| |||||||||| ||||| || |||||||| | ||    
T  18786246 aaataccaaggaccaaaaccaaatattctatatttgca-ggactaaaaccaaaaaaatatttttacagggactaaaaccaaaacgccagatatttgcagg 18786344  T
Q  100 gatcatttccatatttaa 117  Q
    || |||||||||||||||    
T  18786345 gaccatttccatatttaa 18786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3598678 - 3598772
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatattt 94  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||||       ||||||||| |||||||||| |||||||  ||||||||    
T  3598678 aaataccaaggaccaaaaccaaatttcctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatattt 3598772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24491108 - 24491226
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| |||||||||||||||||| ||||||| || ||||||||||||||       ||||||||| |||||||||| |||||||  ||||  || | ||    
T  24491108 aaatatcaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaacaaatatttttacagggactaaaaccaaaatgtcagattattgcagg 24491207  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  24491208 gaccatttccatatttaag 24491226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 43197166 - 43197284
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||| |       ||||||||  ||||||||||| ||||  | |||||||| | ||    
T  43197166 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaacaaaaaaatatttttatagggactaaaacaaaaacaccagatatttgcagg 43197265  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  43197266 gaccatttccatatttaag 43197284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5933390 - 5933508
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||        ||||||||  || ||||||  ||||| || |||||||||| ||    
T  5933390 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacaaaaaatatatttttataggaactaaatccaaaacgctagatatttacagg 5933489  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||| ||||||||||    
T  5933490 gaccattttcatatttaag 5933508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 6542524 - 6542641
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    ||||||||||||| |||||||||| ||||||| || |||||||||||| |       | ||||||  |||||||||  |||||||| |||||||||| ||    
T  6542524 aaataccaaggactaaaaccaaatattctatatttgcagggactaaaa-caaatttttttttttatagggactaaatccaaaatgccagatatttacagg 6542622  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  6542623 gaccatttccatatttaag 6542641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22394242 - 22394124
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| || |||||||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  22394242 aaatatcagggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 22394143  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  22394142 gacaattttcatatttaag 22394124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4122695 - 4122648
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||    
T  4122695 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 4122648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6497310 - 6497263
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||    
T  6497310 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 6497263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10461463 - 10461416
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||    
T  10461463 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 10461416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15969695 - 15969742
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||    
T  15969695 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 15969742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15969548 - 15969499
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || ||| ||||||||||    
T  15969548 aaataccaaggaccaaaaccaaatattctatatttgcagagactaaaacc 15969499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18786099 - 18786050
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || || |||||||||||    
T  18786099 aaataccaaggaccaaaaccaaatattctatatttgcaaggactaaaacc 18786050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22394389 - 22394438
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || || |||||||||||    
T  22394389 aaataccaaggaccaaaaccaaatattctatatttgcatggactaaaacc 22394438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41137259 - 41137141
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||| |||| ||||||| || || |||||||||||       ||||||||  || | ||||| ||||| || |||||||| | |     
T  41137259 aaataccaaggaccaaaactaaatattctatatttgcaaggactaaaaccaaaaaaatatttttataggtattaaaaccaaaacgccagatatttgcagt 41137160  T
Q  100 gatcatttccatatttaag 118  Q
    |||||||||||||||||||    
T  41137159 gatcatttccatatttaag 41137141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 14868938 - 14869054
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||| |||||||||||||| |||| || ||||||||||||||       ||||||||| | |||||||| |||||||  |||||||| | ||    
T  14868938 aaataccaaggatcaaaaccaaatttt-tatatttgcagggactaaaaccaaaaaaatatttttacagtgactaaaaccaaaatgtcagatatttgcagg 14869036  T
Q  100 gatcatttccatatttaa 117  Q
    ||  |||| |||||||||    
T  14869037 gactattttcatatttaa 14869054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 43197012 - 43196925
Alignment:
Q  8 aaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatattt 94  Q
    |||||||||||| ||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  ||||||||    
T  43197012 aaggaccaaaactaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatattt 43196925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6542377 - 6542328
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||| ||||| |||||||| |||| || ||||||||||||||    
T  6542377 aaataccaaggatcaaaatcaaattttttatatttgcagggactaaaacc 6542328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7133390 - 7133439
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||  || |||| || ||||||||||||||    
T  7133390 aaataccaaggaccaaaaccaaaaattttatatttgcagggactaaaacc 7133439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14868791 - 14868742
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||| ||||||||||||||||| ||||||| || ||| ||||||||||    
T  14868791 aaatactaaggaccaaaaccaaatattctatatttgcagtgactaaaacc 14868742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 24490961 - 24490912
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||| | || ||||||||||||||||||| || ||||||||||||||    
T  24490961 aaataccgatgatcaaaaccaaattttctatatttgcagggactaaaacc 24490912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27285088 - 27284970
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  || ||||||| |||||||| |||||||| | ||    
T  27285088 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttataggaactaaaatcaaaatgccagatatttgcagg 27284989  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  27284988 gaccatttccatatttaag 27284970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 52835663 - 52835545
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  52835663 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagg 52835564  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  52835563 gaccatttccatatttaag 52835545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26582877 - 26582995
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||| |       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  26582877 aaataccaaggaccaaaatcaaatattctatatttgcagggactaaaatcaaaaaaatatttttacagggactaaaatcaaaatgtcagatatttgcagg 26582976  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  26582977 gaccatttccatatttaag 26582995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27934569 - 27934451
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| ||  |||||||||||||       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  27934569 aaataccaaggaccaaaaccaaatattctatatttgaagggactaaaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagg 27934470  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  27934469 gaccatttccatatttaag 27934451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33162585 - 33162703
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    ||||| |||||||||||||||||| ||||||| || || |||||||||||       ||||||||  ||||||||||| |||| |  |||||||||||||    
T  33162585 aaatatcaaggaccaaaaccaaatattctatatttgcaaggactaaaaccaaaaaaatatttttatagggactaaaactaaaacgtcagatatttacggg 33162684  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  33162685 gaccatttccatatttaag 33162703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 38807811 - 38807921
Alignment:
Q  9 aggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggggatcattt 107  Q
    ||||||||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||||| ||||  ||||    
T  38807811 aggaccaaaaccaaattttttatatttgcagggactaaaaccaaacatatatttttacagggactaaaatcaaaatgtcagatatttacagggactattt 38807910  T
Q  108 ccatatttaag 118  Q
    |||||||||||    
T  38807911 ccatatttaag 38807921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 50645737 - 50645855
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    |||||| |||||||||||||||||||| |||| || ||||||||||||||       ||||||||  ||||||||||| ||||||  |||||||||| ||    
T  50645737 aaatacaaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaactaaaatgtcagatatttacagg 50645836  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  50645837 gactattttcatatttaag 50645855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38807656 - 38807539
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||   || |||||| ||||| || |||||||||| ||    
T  38807656 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttataagggctaaaaccaaaacgccagatatttacagg 38807557  T
Q  100 gatcatttccatatttaa 117  Q
    || ||||| |||||||||    
T  38807556 gaccattttcatatttaa 38807539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14546101 - 14546219
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggact-aaaacaaaatgcaagatatttacggg 99  Q
    |||||| ||||||||||||||||| ||||||| || |||||||||||||        ||||||||| | |||| ||| |||||||  |||||||| | ||    
T  14546101 aaatacaaaggaccaaaaccaaatattctatatttgcagggactaaaactcaaaaaatatttttacagtgactgaaaccaaaatgtcagatatttgcagg 14546200  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  14546201 gaccatttccatatttaag 14546219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29838559 - 29838677
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||| |||| ||||||  || || |||||||||||       ||||||||   ||||||||| ||||| ||||||||||| | ||    
T  29838559 aaataccaaggaccaaaactaaatattctatttttgcaaggactaaaaccaaaaaaatatttttatatggactaaaaccaaaacgcaagatatttgcagg 29838658  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  29838659 gaccatttccatatttaag 29838677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 46962847 - 46962965
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||| ||||||||||||| ||||||| || |||||| |||||||       ||||||||  |||||||||| ||| | || |||||||| | ||    
T  46962847 aaataccaagaaccaaaaccaaatattctatatttgcagggattaaaaccaaaaaaatatttttatagggactaaaaccaatacgccagatatttgcagg 46962946  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  46962947 gaccatttccatatttaag 46962965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 49499961 - 49499843
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| || |||| || ||||||||||||||       ||||||||  |||||||||| |||||  | |||||||| |  |    
T  49499961 aaataccaaggaccaaaaccaaatattatatatttgcagggactaaaacccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgcaag 49499862  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  49499861 gaccatttccatatttaag 49499843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49500108 - 49500185
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac 78  Q
    ||||||||||||||||||||||||||| |||| || || |||||||||||       ||||||||| |||||||||||    
T  49500108 aaataccaaggaccaaaaccaaattttttatatttgcaaggactaaaaccaaaaaaatatttttacagggactaaaac 49500185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32315494 - 32315447
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    |||||||||||||||||||||||||||||||| || || |||||||||    
T  32315494 aaataccaaggaccaaaaccaaattttctatatttgcaaggactaaaa 32315447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 889246 - 889197
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||| |||| |||| || |||||||||    
T  889246 aaataccaaggaccaaaaccaaattttttatatttacgggaactaaaacc 889197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7029503 - 7029385
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    ||||||| | |||||||||||||| ||||||| || ||||||||||||||       ||||||||  ||||||| ||| |||| || |||||||| | ||    
T  7029503 aaataccgaagaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagggactagaacaaaaacgccagatatttgcagg 7029404  T
Q  100 gatcatttccatatttaag 118  Q
     | ||||||||||||||||    
T  7029403 aaccatttccatatttaag 7029385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17109969 - 17109920
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||| |||| || |||| |||||||||    
T  17109969 aaataccaaggaccaaaaccaaattttttatatttgcaggcactaaaacc 17109920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46962700 - 46962651
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||| ||||||||||||||||||||| |||| || ||||||||||||||    
T  46962700 aaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaacc 46962651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 50645590 - 50645472
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    |||||| ||||| ||||||||||| ||||||  || || |||||||||||       ||||||||  || |||||||| |||| ||||||||||| | ||    
T  50645590 aaatactaaggatcaaaaccaaatattctatttttgcaaggactaaaaccaaaaaaatatttttataggaactaaaaccaaaacgcaagatatttgcagg 50645491  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  50645490 gaccatttccatatttaag 50645472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16056466 - 16056350
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| ||| |||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  16056466 aaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagg 16056368  T
Q  100 gatcatttccatatttaa 117  Q
    || || ||||||||||||    
T  16056367 gaccaattccatatttaa 16056350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 52835810 - 52835857
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    |||||| |||||||||||||||||||| |||| || ||||||||||||    
T  52835810 aaatacgaaggaccaaaaccaaattttttatatttgcagggactaaaa 52835857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42093513 - 42093438
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa 76  Q
    |||||||||||| |||||||||||||| |||| || ||| ||||||||||       ||||||||| |||||||||    
T  42093513 aaataccaaggatcaaaaccaaattttttatatttgcagagactaaaaccaaaaaaatatttttacagggactaaa 42093438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21323153 - 21323202
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||  |||||||||| ||||||| || ||||||||||||||    
T  21323153 aaataccaaggattaaaaccaaatattctatatttgcagggactaaaacc 21323202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14545954 - 14545906
Alignment:
Q  1 aaataccaaggaccaaaaccaaa-ttttctatagttacagggactaaaa 48  Q
    ||||||||||||||||||||||| |||| |||| || ||||||||||||    
T  14545954 aaataccaaggaccaaaaccaaatttttttatatttgcagggactaaaa 14545906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29838412 - 29838364
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||| |||||||||||||||||||| |||| || ||| |||||||||    
T  29838412 aaatacaaaggaccaaaaccaaattttttatatttgcagagactaaaac 29838364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20062063 - 20062181
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  20062063 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacccaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagg 20062162  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  20062163 gaccatttccatatttaag 20062181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26244667 - 26244549
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||| ||||| ||||||| || ||||||||||| ||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  26244667 aaataccaaggaccaaaatcaaatattctatatttgcagggactaaatccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 26244568  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  26244567 gaccatttccatatttaag 26244549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 50096251 - 50096133
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||| ||||||||||| ||||||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  50096251 aaataccaaggatcaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 50096152  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||||||||||||||    
T  50096151 gacaatttccatatttaag 50096133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20061916 - 20061798
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||| |||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  20061916 aaataccaaggaccaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 20061817  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  20061816 gactattttcatatttaag 20061798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 37172513 - 37172631
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||| |||||||||||||| ||||||| |  ||||||||||||||       ||||||||  |||||||||| ||||| || |||||||||| ||    
T  37172513 aaataccaaagaccaaaaccaaatattctatattcgcagggactaaaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttaccgg 37172612  T
Q  100 gatcatttccatatttaag 118  Q
    || ||| ||||||||||||    
T  37172613 gaccatgtccatatttaag 37172631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39027599 - 39027481
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||| |||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| ||||    
T  39027599 aaataccaaggatcaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaagcaaaatgtcagatatttccggg 39027500  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| || |||||||    
T  39027499 gactattttcacatttaag 39027481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 47829080 - 47828963
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||| |       ||||||||  |||||||||  ||||||||   |||||||| ||    
T  47829080 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa-caaaaaaatatttttatagggactaaatccaaaatgccgtatatttacagg 47828982  T
Q  100 gatcatttccatatttaag 118  Q
    |||||||||||||||||||    
T  47828981 gatcatttccatatttaag 47828963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33822 - 33916
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatattt 94  Q
    ||||||||||||||||||||||||||| |||| |||||| || |||||||       ||||||||| |||||||||| |||||||  ||||||||    
T  33822 aaataccaaggaccaaaaccaaattttttatatttacagagaataaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatattt 33916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14602128 - 14602010
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||| ||||||||||| ||||||| || |||||||||||||        ||||||||   ||||||||| |||| ||| |||||||| | ||    
T  14602128 aaataccaaggatcaaaaccaaatattctatatttgcagggactaaaactaaaaaaatatttttatatggactaaaaccaaagtgccagatatttgcagg 14602029  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  14602028 gaccatttccatatttaag 14602010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28031912 - 28032030
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||||||| ||| |||| || |||||||||||||        ||||||||| |||||||||| |||||||  |||||||| | ||    
T  28031912 aaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 28032011  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  28032012 gactattttcatatttaag 28032030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 43191774 - 43191656
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||||||       ||||||||| ||||||||||| |||||   |||||||| | ||    
T  43191774 aaataccaaggaccaaaaccaatttttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaactaaaatatcagatatttgcagg 43191675  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  43191674 gacaattttcatatttaag 43191656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50096398 - 50096447
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  50096398 aaataccaaggaccaaaaccaaattttctatatttgtagggactaaaacc 50096447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 50624884 - 50624835
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  50624884 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 50624835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50625031 - 50625080
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  50625031 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc 50625080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26244814 - 26244861
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||    
T  26244814 aaataccaaggatcaaaaccaaattttctatatttgcagggactaaaa 26244861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10914039 - 10914088
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||  |||| || ||||||||||||||    
T  10914039 aaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaacc 10914088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28031765 - 28031647
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    ||||| |||||||||||||||||| || |||| || ||||||||||||||       || |||||   |||||||||| |||| || |||||||| | ||    
T  28031765 aaatatcaaggaccaaaaccaaatattatatatttgcagggactaaaaccaaaaaaataattttataaggactaaaactaaaacgccagatatttgcagg 28031666  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  28031665 gaccatttccatatttaag 28031647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33619161 - 33619279
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||| ||||||||||||||||| ||||||| ||  |||||||||||||       ||||||||  || ||||||| |||||  | |||||||| | ||    
T  33619161 aaatacaaaggaccaaaaccaaatattctatatttgtagggactaaaaccaaaaaaatatttttataggaactaaaaccaaaacaccagatatttgcagg 33619260  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  33619261 gaccatttccatatttaag 33619279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42154868 - 42154819
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||| |||| ||||||| || ||||||||||||||    
T  42154868 aaataccaaggaccaaaactaaatattctatatttgcagggactaaaacc 42154819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42155015 - 42155064
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||| ||||||||||||||||||||| |||| || ||||||||||||||    
T  42155015 aaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaacc 42155064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43191921 - 43191970
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || |||| |||||||||    
T  43191921 aaataccaaggaccaaaaccaaatattctatatttgcaggaactaaaacc 43191970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33675 - 33557
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| || |||| || ||| |||||||||        ||||||||  |||||||||| ||||| |  |||||||| | ||    
T  33675 aaataccaaggaccaaaaccaaatattttatatttgcagagactaaaactagaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagg 33576  T
Q  100 gatcatttccatatttaag 118  Q
    |||||| | ||||||||||    
T  33575 gatcatgttcatatttaag 33557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10913892 - 10913843
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||| ||| |||||||||||||| ||||||| || ||||||||||||||    
T  10913892 aaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaacc 10913843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18963727 - 18963609
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| ||| |||||||||||||| ||||||| || || |||||||||||       ||||||||  |||||||||| ||||| ||  ||||||| | ||    
T  18963727 aaataacaatgaccaaaaccaaatattctatatttgcaaggactaaaaccaaaaaaatatttttatagggactaaaaccaaaacgccggatatttgcagg 18963628  T
Q  100 gatcatttccatatttaag 118  Q
    || |||||||| |||||||    
T  18963627 gaccatttccacatttaag 18963609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14602275 - 14602323
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    ||||| |||||||||||||||| |||| |||| || |||||||||||||    
T  14602275 aaataacaaggaccaaaaccaatttttttatatttgcagggactaaaac 14602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47829227 - 47829275
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    ||||| |||||||||||||||| |||| |||| || |||||||||||||    
T  47829227 aaatatcaaggaccaaaaccaatttttttatatttgcagggactaaaac 47829275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 220630 - 220513
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||  |||||||| |||||||||| ||    
T  220630 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagg 220532  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  220531 gaccatttccatatttaag 220513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 689785 - 689668
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||  |||||||| |||||||||| ||    
T  689785 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagg 689687  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  689686 gaccatttccatatttaag 689668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 734253 - 734136
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||  |||||||| |||||||||| ||    
T  734253 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagg 734155  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  734154 gaccatttccatatttaag 734136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 858149 - 858032
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||  |||||||| |||||||||| ||    
T  858149 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagg 858051  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  858050 gaccatttccatatttaag 858032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6943775 - 6943657
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||| |       ||||||||  |||||||||| ||||| || | |||||| ||||    
T  6943775 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaatcaaaaaaatatttttatagggactaaaaccaaaacgccaaatatttgcggg 6943676  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  6943675 gaccatttccatatttaag 6943657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13154357 - 13154239
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||| ||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| |||||  | |||||||| | ||    
T  13154357 aaataccaaggaccaaaatcaaatattctatatttgcagggactaaaaccaaaaaaatatttttagagggactaaaaccaaaacaccagatatttgcagg 13154258  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  13154257 gaccatttccatatttaag 13154239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31186492 - 31186374
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||| |||||||||||||| ||||||| || |||||||||||| |       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  31186492 aaataccaatgaccaaaaccaaatattctatatttgcagggactaaaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagg 31186393  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  31186392 gaccatttccatatttaag 31186374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26479559 - 26479673
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||| ||||||||||||||||| ||||||| || ||||||||||||||       | ||||||  |||||||||| ||||| || |||||||| | ||    
T  26479559 aaatactaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaatttttttttttatagggactaaaaccaaaacgccagatatttgcagg 26479658  T
Q  100 gatcatttccatatt 114  Q
    || ||||||||||||    
T  26479659 gaccatttccatatt 26479673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31186638 - 31186687
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||||    
T  31186638 aaataccaaggaccaaaaccaaattttttagatttacagggactaaaacc 31186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18764550 - 18764598
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||    
T  18764550 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 18764598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6891896 - 6891849
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||    
T  6891896 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 6891849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31685788 - 31685672
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || || |||||||||||       ||||||||  |||| ||||| ||||| || |||||||| | ||    
T  31685788 aaataccaaggaccaaaaccaaatattctatatttgcatggactaaaaccaaaaaaatatttttatagggattaaaaccaaaacgctagatatttgcagg 31685689  T
Q  100 gatcatttccatattta 116  Q
    || | ||||||||||||    
T  31685688 gaccttttccatattta 31685672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9180310 - 9180428
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||| ||||||||||||||||||||| |||| || || |||||||||||       ||||||||| |||| ||||| |||||||  |||||||| | ||    
T  9180310 aaatatcaaggaccaaaaccaaattttttatatttgcaaggactaaaaccaaaacaatatttttacagggattaaaaccaaaatgtcagatatttgcagg 9180409  T
Q  100 gatcatttccatatttaag 118  Q
    ||| || | ||||||||||    
T  9180410 gattatattcatatttaag 9180428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13154504 - 13154553
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||||||    
T  13154504 aaataccaaggaccaaaaccaatttttttatatttgcagggactaaaacc 13154553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13405713 - 13405762
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||| |||| ||  |||||||||||||    
T  13405713 aaataccaaggaccaaaaccaaattttttatatttgaagggactaaaacc 13405762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 24332380 - 24332331
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||| ||||||||| ||||||| || ||||||||||||||    
T  24332380 aaataccaaggacccaaaccaaatattctatatttgcagggactaaaacc 24332331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31685936 - 31685985
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||| |||||||||||||||||||| |||| || ||||||||||||||    
T  31685936 aaatactaaggaccaaaaccaaattttttatatttgcagggactaaaacc 31685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24332527 - 24332574
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||    
T  24332527 aaataccaaggaccaaaaccaaattttttata-ttgcagggactaaaac 24332574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3272985 - 3273032
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||||    
T  3272985 aaataccaaggaccaaaaccaagttttttatatttgcagggactaaaa 3273032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2835243 - 2835194
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||| |||||||||||||||| || |||| |||||| ||||||||||    
T  2835243 aaataccgaggaccaaaaccaaatattttatatttacagagactaaaacc 2835194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31403178 - 31403227
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||| ||||||||||||||||| ||||||| ||  |||||||||||||    
T  31403178 aaatacaaaggaccaaaaccaaatattctatatttgaagggactaaaacc 31403227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 42516985 - 42516867
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||| |||| ||||||| || ||||||||||||||       ||||||||  || ||||||| |||||||| |||||||| | ||    
T  42516985 aaataccaaggaccaaaactaaatattctatatttgcagggactaaaaccaaaaaaatatttttataggaactaaaaccaaaatgccagatatttgcagg 42516886  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  42516885 gaccatttccatatttaag 42516867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13426557 - 13426675
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||       ||||||||  ||||||||||| |||| |  |||||||| | ||    
T  13426557 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttagagggactaaaactaaaacgtcagatatttgcagg 13426656  T
Q  100 gatcatttccatatttaag 118  Q
    || |||| |||||||||||    
T  13426657 gaccattcccatatttaag 13426675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 42517132 - 42517250
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||| |||| |||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| ||||    
T  42517132 aaataccaaggactaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcggg 42517231  T
Q  100 gatcatttccatatttaag 118  Q
    ||| |||| || |||||||    
T  42517232 gattattttcacatttaag 42517250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 34595586 - 34595702
Alignment:
Q  3 ataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacgggga 101  Q
    |||||||||||||||||||||| ||||||| || ||||||||||| ||       ||||||||  |||||||||| ||||| |  |||||||||| ||||    
T  34595586 ataccaaggaccaaaaccaaatattctatatttgcagggactaaagccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttacaggga 34595685  T
Q  102 tcatttccatatttaag 118  Q
     ||||| ||||||||||    
T  34595686 ccattttcatatttaag 34595702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19157811 - 19157762
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  19157811 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 19157762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19157958 - 19158076
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||||||| ||| |||| || |||||||||||||        ||||||||| |||||||||| |||||||  |||||||| | ||    
T  19157958 aaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 19158057  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  19158058 gactattttcatatttaag 19158076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20757210 - 20757161
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  20757210 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 20757161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20757357 - 20757475
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||||||| ||| |||| || |||||||||||||        ||||||||| |||||||||| |||||||  |||||||| | ||    
T  20757357 aaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagg 20757456  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  20757457 gactattttcatatttaag 20757475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22364916 - 22365034
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||| ||||||||||| ||||||| || ||||||||||||||       ||||||||    |||||||| ||||||||||||||||| |  |    
T  22364916 aaataccaaggatcaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttataaagactaaaaccaaaatgcaagatatttgcaag 22365015  T
Q  100 gatcatttccatatttaag 118  Q
     | ||||||||||||||||    
T  22365016 aaccatttccatatttaag 22365034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 44219559 - 44219677
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||| |||||||||||| ||||||  || ||||||||||||||       ||||||||  |||| ||||| ||||| ||||||||||| | ||    
T  44219559 aaataccaagggccaaaaccaaatattctatttttgcagggactaaaaccaaaaaaatatttttatagggaataaaaccaaaacgcaagatatttgcagg 44219658  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||||||||||||||    
T  44219659 gactatttccatatttaag 44219677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19476659 - 19476707
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||    
T  19476659 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 19476707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40729181 - 40729133
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||    
T  40729181 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 40729133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24474 - 24356
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||| |||| |||||||| |||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||| | ||    
T  24474 aaatacaaaggtccaaaacccaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgccgg 24375  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  24374 gactattttcatatttaag 24356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24621 - 24670
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||  || ||||||||||||||    
T  24621 aaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 24670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 40729332 - 40729422
Alignment:
Q  5 accaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatattt 94  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  ||||||||    
T  40729332 accaaggaccaaaacccaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatattt 40729422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 44219412 - 44219294
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||| |||||||||||||||||||| |||| ||| ||||||||||| |       ||||||||| | |||||||| |||||||  |||||||| | ||    
T  44219412 aaatacaaaggaccaaaaccaaattttttatatttatagggactaaaaacaaaaaaatatttttacagtgactaaaaccaaaatgtcagatatttgcagg 44219313  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  44219312 gactattttcatatttaag 44219294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 44483491 - 44483609
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||| ||||||||||||| ||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  | |||||| ||||    
T  44483491 aaataccaatgaccaaaaccaaaatttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgttaaatatttgcggg 44483590  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| || |||||||    
T  44483591 gactattttcacatttaag 44483609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 829946 - 829994
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    ||||||||||||||||||||||||||| |||| || |||||||| ||||    
T  829946 aaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 829994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1195126 - 1195174
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    ||||||||||||||||||||||||||| |||| || |||||||| ||||    
T  1195126 aaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 1195174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19476513 - 19476465
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||||||| ||||||||||||| ||||||| || |||||||||||||    
T  19476513 aaataccaagaaccaaaaccaaatattctatatttgcagggactaaaac 19476465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22954596 - 22954713
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    ||||||||| |||||||| ||||| ||||||| || ||||||||||||||       ||||||||  | || |||||| ||||||| |||||||||| ||    
T  22954596 aaataccaaagaccaaaatcaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagagattaaaactaaaatgccagatatttacagg 22954695  T
Q  100 gatcatttccatatttaa 117  Q
     | |||||||| ||||||    
T  22954696 aaccatttccaaatttaa 22954713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31579549 - 31579500
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||| ||| |||| |||| || ||||||||||||||    
T  31579549 aaataccaaggaccaaaatcaatttttttatatttgcagggactaaaacc 31579500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35026709 - 35026758
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||| |||||||||||||||| |||| |||| |||||| ||||||||||    
T  35026709 aaatatcaaggaccaaaaccaatttttttatatttacagagactaaaacc 35026758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3345284 - 3345402
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||| ||||||||||||||||| ||||||| ||||||| |||||||||       ||||||||  |||||||||| ||||| || |||||||| | ||    
T  3345284 aaatactaaggaccaaaaccaaatgttctatatttacaggaactaaaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagg 3345383  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  3345384 gaccatttccatatttaag 3345402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 8926305 - 8926187
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||  || ||||||||||||||       ||||||||  |||||||||| ||||| | ||||||||| |||     
T  8926305 aaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccaaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcgga 8926206  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  8926205 gaccatttccatatttaag 8926187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 8936562 - 8936444
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||  || ||||||||||||||       ||||||||  |||||||||| ||||| | ||||||||| |||     
T  8936562 aaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccaaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcgga 8936463  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  8936462 gaccatttccatatttaag 8936444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 17238299 - 17238393
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatattt 94  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||       ||||||||| |||||||||| |||||||  ||||||||    
T  17238299 aaataccaaggaccaaaaccaaattttctatatttgcagggactaaaaccaaaaaattatttttacagggactaaaaccaaaatgtcagatattt 17238393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33783662 - 33783780
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc-nnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacgg 98  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||        |||||||| ||||||||||| | ||| || |||||||| | |    
T  33783662 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaaatatttttagggggactaaaaccgaaacgccagatatttgcag 33783761  T
Q  99 ggatcatttccatatttaa 117  Q
    |||||||||||||||||||    
T  33783762 ggatcatttccatatttaa 33783780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 8926456 - 8926572
Alignment:
Q  3 ataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacgggga 101  Q
    |||| |||||||||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||||| ||||    
T  8926456 atacaaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttaccggga 8926555  T
Q  102 tcatttccatatttaag 118  Q
      |||| ||||||||||    
T  8926556 ctattttcatatttaag 8926572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 8936713 - 8936829
Alignment:
Q  3 ataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacgggga 101  Q
    |||| |||||||||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||| |||||||  |||||||||| ||||    
T  8936713 atacaaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttaccggga 8936812  T
Q  102 tcatttccatatttaag 118  Q
      |||| ||||||||||    
T  8936813 ctattttcatatttaag 8936829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3484902 - 3484783
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc-nnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacgg 98  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||        |||||||||   |||||||| |||||||  |||||||| | |    
T  3484902 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaaatatttttacacagactaaaaccaaaatgttagatatttgcag 3484803  T
Q  99 ggatcatttccatatttaag 118  Q
    ||||||||||||||||||||    
T  3484802 ggatcatttccatatttaag 3484783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5923945 - 5923826
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc-nnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacgg 98  Q
    |||||||||||||||||||||||| ||||||  || ||||||||||||||        ||||||||  |||||||||| ||||| ||||||||||| | |    
T  5923945 aaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccaaaaaaaatatttttatagggactaaaaccaaaacgcaagatatttgcag 5923846  T
Q  99 ggatcatttccatatttaag 118  Q
    ||| ||||||||||||||||    
T  5923845 ggaccatttccatatttaag 5923826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19661614 - 19661732
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||| |       ||||||||  |||||||||| ||||| || |||||||| |  |    
T  19661614 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcaag 19661713  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  19661714 gaccatttccatatttaag 19661732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30608984 - 30608907
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac 78  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||       ||||||||| |||||||||||    
T  30608984 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 30608907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29819504 - 29819455
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  29819504 aaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 29819455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3345138 - 3345090
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||    
T  3345138 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 3345090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16525458 - 16525506
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||||||    
T  16525458 aaatacgaaggaccaaaaccaaattttttatatttacagggactaaaac 16525506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 26272247 - 26272363
Alignment:
Q  3 ataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacgggga 101  Q
    |||||||||||||||| |||||||| |||| || |||| |||||||||       ||||||||  |||||||||| |||||||  |||||||||| ||||    
T  26272247 ataccaaggaccaaaatcaaattttttatatttgcaggaactaaaaccaaaaatatatttttatagggactaaaaccaaaatgtcagatatttacaggga 26272346  T
Q  102 tcatttccatatttaag 118  Q
      |||| ||||||||||    
T  26272347 ctattttcatatttaag 26272363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19661467 - 19661418
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||| |||||||| |||| || ||||||||||||||    
T  19661467 aaataccaaggaccaaaatcaaattttttatatttgcagggactaaaacc 19661418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28853603 - 28853554
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||| |||| ||||||| || ||||||||||||||    
T  28853603 aaataccaaggaccaaaactaaatattctatatttgcagggactaaaacc 28853554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30609131 - 30609249
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||||||||||||||||||||| || |||| || || |||||||||||       ||||||||  |||||||||| |||||  | |||||||| | ||    
T  30609131 aaataccaaggaccaaaaccaaatattatatatttgcatggactaaaacccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgcagg 30609230  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||| ||||||||||    
T  30609231 gaccattttcatatttaag 30609249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31717293 - 31717244
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| ||||||| || || |||||||||||    
T  31717293 aaataccaaggaccaaaaccaaatattctatatttgcatggactaaaacc 31717244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31717440 - 31717489
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||  |||| || ||||||||||||||    
T  31717440 aaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaacc 31717489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3485039 - 3485086
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaa 48  Q
    ||||||||| ||||||||||||||||| |||| || ||||||||||||    
T  3485039 aaataccaaagaccaaaaccaaattttttatatttgcagggactaaaa 3485086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28853750 - 28853799
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||| ||||||||||||||||||||| |||| || |||| |||||||||    
T  28853750 aaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaacc 28853799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 5404661 - 5404601
Alignment:
Q  58 tatttttacggggactaaaa-caaaatgcaagatatttacggggatcatttccatatttaa 117  Q
    ||||||||  |||||||||| |||||||| |||||||| | |||| |||||||||||||||    
T  5404661 tatttttatagggactaaaatcaaaatgccagatatttgcagggaccatttccatatttaa 5404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5924092 - 5924140
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||| |||||||||||||||||||| |||| ||  ||||||||||||    
T  5924092 aaatacaaaggaccaaaaccaaattttttatatttgtagggactaaaac 5924140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 8660 - 8541
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa--caaaatgcaagatatttacgg 98  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||       ||||||||| ||||||||||  |||||||  |||||||| | |    
T  8660 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaaccaaaatgttagatatttgcag 8561  T
Q  99 ggatcatttccatatttaag 118  Q
    |||  |||| ||||||||||    
T  8560 ggacaattttcatatttaag 8541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8807 - 8922
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaa-acaaaatgcaagatatttacggg 99  Q
    |||||||||||| ||||||||||| ||||||| || |||||||||||||        ||||||||  |||||||||  ||||| || | |||| ||||||    
T  8807 aaataccaaggatcaaaaccaaatattctatatttgcagggactaaaacaaaaaaaatatttttatagggactaaatccaaaacgccaaatatatacggg 8906  T
Q  100 gatcatttccatattt 115  Q
    || |||||||||||||    
T  8907 gaccatttccatattt 8922  T

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Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 212677 - 212795
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    |||||| || |||||||||||||| ||||||| || ||||||||||||||       ||||||||  |||||||||| |||||    |||||||||||||    
T  212677 aaatacgaaagaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaaccaaaacatcagatatttacggg 212776  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  212777 gaccatttccatatttaag 212795  T

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Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 212530 - 212412
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaa-caaaatgcaagatatttacggg 99  Q
    ||||||||||||||||||||||| ||| |  | || |||||||| |||||       ||||||||| |||||||||| |||||||   ||||||| ||||    
T  212530 aaataccaaggaccaaaaccaaaattttttaatttgcagggacttaaaccaaaaaaatatttttacagggactaaaaccaaaatgtctgatatttgcggg 212431  T
Q  100 gatcatttccatatttaag 118  Q
    ||  |||| ||||||||||    
T  212430 gactattttcatatttaag 212412  T

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Target: scaffold0147 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25241 - 25192
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  25241 aaatacgaaggaccaaaaccaaatattctatatttacagggactaaaacc 25192  T

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Target: scaffold0137 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36883 - 36834
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  36883 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc 36834  T

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Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43395 - 43347
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||    
T  43395 aaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 43347  T

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Target: scaffold0103; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43543 - 43592
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||| ||||||||||| ||||||| || ||||||||||||||    
T  43543 aaataccaaggatcaaaaccaaatattctatatttgcagggactaaaacc 43592  T

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Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4652 - 4701
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    |||||||||||||||||||||||| || |||| || ||||||||||||||    
T  4652 aaataccaaggaccaaaaccaaatattatatatttgcagggactaaaacc 4701  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 74179 - 74228
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||| ||||||||| |||| || ||||||||||||||    
T  74179 aaataccaaggaccaaagccaaattttttatatttgcagggactaaaacc 74228  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 118147 - 118029
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaaccnnnnnnntatttttacggggactaaaac-aaaatgcaagatatttacggg 99  Q
    |||||| ||||| |||||  |||| ||||||| || ||||||||||||||       ||||| || |||||||||| | |||| || |||||||||| ||    
T  118147 aaatacaaaggatcaaaattaaatattctatatttgcagggactaaaaccaaaaaaatatttatatggggactaaatccaaaacgccagatatttacagg 118048  T
Q  100 gatcatttccatatttaag 118  Q
    || ||||||||||||||||    
T  118047 gaccatttccatatttaag 118029  T

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Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 118297 - 118346
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaacc 50  Q
    ||||||||||||||||||||||||||| |||| || ||| ||||||||||    
T  118297 aaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaacc 118346  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36259 - 36307
Alignment:
Q  1 aaataccaaggaccaaaaccaaattttctatagttacagggactaaaac 49  Q
    |||||||||||| ||||||||||| ||||||| || |||| ||||||||    
T  36259 aaataccaaggatcaaaaccaaatattctatatttgcaggaactaaaac 36307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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