View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14172_low_7 (Length: 360)

Name: NF14172_low_7
Description: NF14172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14172_low_7
NF14172_low_7
[»] chr1 (28 HSPs)
chr1 (18-342)||(47811827-47812150)
chr1 (63-103)||(124625-124665)
chr1 (59-103)||(10012320-10012364)
chr1 (260-323)||(47788531-47788597)
chr1 (66-103)||(831428-831465)
chr1 (66-103)||(7307455-7307492)
chr1 (66-103)||(9091198-9091235)
chr1 (66-103)||(9997903-9997940)
chr1 (66-103)||(25990591-25990628)
chr1 (66-103)||(28970993-28971030)
chr1 (66-103)||(37418989-37419026)
chr1 (66-103)||(49129550-49129587)
chr1 (66-100)||(33126728-33126762)
chr1 (66-103)||(17109467-17109504)
chr1 (66-103)||(18572088-18572125)
chr1 (66-103)||(19998146-19998183)
chr1 (66-103)||(25087463-25087500)
chr1 (66-103)||(29345038-29345075)
chr1 (66-103)||(38294657-38294694)
chr1 (66-103)||(41574768-41574805)
chr1 (66-103)||(41575717-41575754)
chr1 (66-103)||(45559639-45559676)
chr1 (66-103)||(45738162-45738199)
chr1 (66-103)||(46683219-46683256)
chr1 (274-323)||(47778409-47778458)
chr1 (66-103)||(51612341-51612378)
chr1 (63-103)||(23775930-23775970)
chr1 (71-103)||(50143547-50143579)
[»] chr2 (31 HSPs)
chr2 (58-103)||(24758647-24758692)
chr2 (66-104)||(32023132-32023170)
chr2 (66-103)||(11942177-11942214)
chr2 (66-103)||(31709229-31709266)
chr2 (66-103)||(32235836-32235873)
chr2 (66-103)||(34830912-34830949)
chr2 (66-103)||(40020261-40020298)
chr2 (66-103)||(41077656-41077693)
chr2 (66-103)||(43439673-43439710)
chr2 (66-103)||(3045473-3045510)
chr2 (66-103)||(3515346-3515383)
chr2 (66-99)||(6077385-6077418)
chr2 (66-103)||(11052104-11052141)
chr2 (66-103)||(11564343-11564380)
chr2 (66-103)||(11796685-11796722)
chr2 (66-103)||(12413779-12413816)
chr2 (66-103)||(12425839-12425876)
chr2 (66-103)||(13873860-13873897)
chr2 (66-103)||(14013985-14014022)
chr2 (66-103)||(14736294-14736331)
chr2 (66-103)||(14742664-14742701)
chr2 (66-103)||(28167702-28167739)
chr2 (66-103)||(32879133-32879170)
chr2 (66-103)||(33146197-33146234)
chr2 (66-103)||(33886813-33886850)
chr2 (66-103)||(35658778-35658815)
chr2 (66-103)||(37329862-37329899)
chr2 (66-103)||(40769245-40769282)
chr2 (67-103)||(8727240-8727276)
chr2 (59-103)||(16600005-16600049)
chr2 (59-103)||(17829586-17829630)
[»] chr7 (27 HSPs)
chr7 (59-103)||(32387643-32387687)
chr7 (53-103)||(46208348-46208398)
chr7 (66-103)||(5228015-5228052)
chr7 (66-103)||(8379327-8379364)
chr7 (66-103)||(29615679-29615716)
chr7 (66-103)||(40401426-40401463)
chr7 (63-103)||(35782966-35783006)
chr7 (64-103)||(7191720-7191759)
chr7 (66-103)||(3391916-3391953)
chr7 (66-103)||(8123150-8123187)
chr7 (66-103)||(16425883-16425920)
chr7 (66-103)||(22711797-22711834)
chr7 (66-103)||(23226500-23226537)
chr7 (66-103)||(23235653-23235690)
chr7 (66-103)||(23727928-23727965)
chr7 (66-103)||(27144715-27144752)
chr7 (66-103)||(28308545-28308582)
chr7 (66-103)||(28441911-28441948)
chr7 (66-103)||(30870071-30870108)
chr7 (66-103)||(32867407-32867444)
chr7 (66-103)||(33576566-33576603)
chr7 (66-103)||(33869822-33869859)
chr7 (66-103)||(36848372-36848409)
chr7 (66-103)||(40401719-40401756)
chr7 (66-103)||(45941615-45941652)
chr7 (63-103)||(552906-552946)
chr7 (71-103)||(46010999-46011031)
[»] chr5 (20 HSPs)
chr5 (66-104)||(36762049-36762087)
chr5 (66-103)||(3933853-3933890)
chr5 (66-103)||(4876873-4876910)
chr5 (66-103)||(12585771-12585808)
chr5 (66-103)||(18523890-18523927)
chr5 (66-103)||(27979394-27979431)
chr5 (66-103)||(35751170-35751207)
chr5 (63-103)||(24763879-24763919)
chr5 (59-103)||(32348346-32348390)
chr5 (59-103)||(36742283-36742327)
chr5 (66-103)||(5138839-5138876)
chr5 (66-103)||(6029776-6029813)
chr5 (66-103)||(10687751-10687788)
chr5 (66-103)||(17968358-17968395)
chr5 (66-103)||(18338062-18338099)
chr5 (66-103)||(31601418-31601455)
chr5 (66-103)||(38497521-38497558)
chr5 (59-103)||(14594237-14594281)
chr5 (71-103)||(22730939-22730971)
chr5 (63-103)||(42429022-42429062)
[»] chr3 (25 HSPs)
chr3 (66-104)||(40036270-40036308)
chr3 (66-103)||(1363927-1363964)
chr3 (66-103)||(7724732-7724769)
chr3 (66-103)||(11388565-11388602)
chr3 (66-103)||(26057627-26057664)
chr3 (66-103)||(32221961-32221998)
chr3 (66-103)||(44499918-44499955)
chr3 (66-103)||(54403724-54403761)
chr3 (63-103)||(8449687-8449727)
chr3 (66-102)||(27394417-27394453)
chr3 (66-103)||(3090293-3090330)
chr3 (66-103)||(3540958-3540995)
chr3 (66-103)||(11345234-11345271)
chr3 (66-99)||(11397168-11397201)
chr3 (66-103)||(13625413-13625450)
chr3 (66-103)||(14600542-14600579)
chr3 (66-103)||(16067389-16067426)
chr3 (72-109)||(17058343-17058380)
chr3 (134-171)||(25084158-25084195)
chr3 (66-103)||(25259403-25259440)
chr3 (66-103)||(25480692-25480729)
chr3 (66-103)||(27639024-27639061)
chr3 (66-103)||(50383559-50383596)
chr3 (63-103)||(27116965-27117005)
chr3 (71-103)||(48841902-48841934)
[»] scaffold0036 (1 HSPs)
scaffold0036 (66-103)||(25380-25417)
[»] scaffold0004 (1 HSPs)
scaffold0004 (66-103)||(351431-351468)
[»] scaffold0001 (1 HSPs)
scaffold0001 (66-103)||(185059-185096)
[»] chr8 (28 HSPs)
chr8 (66-103)||(3940092-3940129)
chr8 (66-103)||(24809749-24809786)
chr8 (66-103)||(33972846-33972883)
chr8 (66-103)||(36016635-36016672)
chr8 (66-103)||(37304392-37304429)
chr8 (66-103)||(42861992-42862029)
chr8 (66-103)||(43776870-43776907)
chr8 (66-103)||(44284225-44284262)
chr8 (59-103)||(14094018-14094062)
chr8 (67-103)||(34925281-34925317)
chr8 (66-103)||(8443200-8443237)
chr8 (66-103)||(12336175-12336212)
chr8 (66-103)||(13421577-13421614)
chr8 (66-103)||(14879685-14879722)
chr8 (58-99)||(15676702-15676743)
chr8 (66-103)||(17564832-17564869)
chr8 (66-103)||(17734787-17734824)
chr8 (66-103)||(21304508-21304545)
chr8 (66-103)||(30056451-30056488)
chr8 (66-103)||(30354402-30354439)
chr8 (66-103)||(32904821-32904858)
chr8 (66-103)||(33969435-33969472)
chr8 (66-103)||(37872742-37872779)
chr8 (66-103)||(40791211-40791248)
chr8 (67-103)||(31846942-31846978)
chr8 (59-103)||(32903757-32903801)
chr8 (63-103)||(35366866-35366905)
chr8 (71-103)||(44746339-44746371)
[»] chr6 (23 HSPs)
chr6 (66-103)||(2655100-2655137)
chr6 (66-103)||(2661300-2661337)
chr6 (66-103)||(6937779-6937816)
chr6 (66-103)||(10702809-10702846)
chr6 (66-103)||(13444014-13444051)
chr6 (66-103)||(14224365-14224402)
chr6 (66-103)||(28494270-28494307)
chr6 (66-103)||(29806679-29806716)
chr6 (66-103)||(32114282-32114319)
chr6 (63-103)||(34250578-34250618)
chr6 (59-102)||(2773100-2773143)
chr6 (66-103)||(2092214-2092251)
chr6 (66-103)||(12767481-12767518)
chr6 (68-101)||(13489631-13489664)
chr6 (66-103)||(14306954-14306991)
chr6 (66-103)||(14313354-14313391)
chr6 (66-103)||(17311589-17311626)
chr6 (66-103)||(21802479-21802516)
chr6 (66-103)||(22268919-22268956)
chr6 (70-103)||(30461603-30461636)
chr6 (66-103)||(31282120-31282157)
chr6 (66-103)||(33950760-33950797)
chr6 (63-103)||(16852458-16852498)
[»] chr4 (28 HSPs)
chr4 (66-103)||(26808544-26808581)
chr4 (66-103)||(33046723-33046760)
chr4 (66-103)||(37709444-37709481)
chr4 (66-103)||(51019814-51019851)
chr4 (66-103)||(53305835-53305872)
chr4 (67-103)||(32448816-32448852)
chr4 (59-103)||(36897967-36898011)
chr4 (67-103)||(38051431-38051467)
chr4 (59-103)||(48372578-48372622)
chr4 (66-103)||(6233290-6233327)
chr4 (66-103)||(7797488-7797525)
chr4 (66-103)||(10556127-10556164)
chr4 (66-103)||(18362572-18362609)
chr4 (66-103)||(21037461-21037498)
chr4 (66-103)||(29429574-29429611)
chr4 (66-103)||(35853721-35853758)
chr4 (66-103)||(36600317-36600354)
chr4 (66-103)||(36687003-36687040)
chr4 (66-103)||(37424322-37424359)
chr4 (66-103)||(39100385-39100422)
chr4 (66-103)||(50825160-50825197)
chr4 (66-103)||(55139885-55139922)
chr4 (66-103)||(56309577-56309614)
chr4 (59-103)||(4964060-4964104)
chr4 (71-103)||(6711394-6711426)
chr4 (59-103)||(19313508-19313552)
chr4 (63-103)||(46490562-46490602)
chr4 (67-103)||(48334638-48334674)
[»] scaffold0166 (1 HSPs)
scaffold0166 (63-103)||(6376-6416)
[»] scaffold0201 (1 HSPs)
scaffold0201 (66-103)||(15486-15523)
[»] scaffold0068 (1 HSPs)
scaffold0068 (66-103)||(59423-59460)
[»] scaffold0003 (1 HSPs)
scaffold0003 (66-103)||(14596-14633)
[»] scaffold0289 (1 HSPs)
scaffold0289 (71-103)||(3925-3957)
[»] scaffold0204 (1 HSPs)
scaffold0204 (67-103)||(22160-22196)
[»] scaffold0006 (1 HSPs)
scaffold0006 (67-103)||(161419-161455)


Alignment Details
Target: chr1 (Bit Score: 285; Significance: 1e-160; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 18 - 342
Target Start/End: Complemental strand, 47812150 - 47811827
Alignment:
Q  18 atgaaatacatatattattttttaaaactcgtgacacaacgttattagatatcataaaaatatctatttatgttaaaatagattaacttttaagggttaa 117  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  47812150 atgaaatacatatattattttttaaaaattgcgacacaacgttattagatatcataaaaatatctatttatgttaaaatagattaacttttaagggt-aa 47812052  T
Q  118 cattgtaatttaagtatctctaaagagagaagtatgtaatttactcaaaataaagatgaagtttaaaaagaatttgaagaataagagacttctagttctc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47812051 cattgtaatttaagtatctctaaagagagaagtatgtaatttactcaaaataaagataaagtttaaaaagaatttgaagaataagagacttctagttctc 47811952  T
Q  218 accataacagtacttcaagatgaagccgatttcgttttaggtttgatagaattggtaagtttcaaacctcaaattacagcttgctctaaaaattctacaa 317  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  47811951 accataacagtacttcaagatgaagccgatttcgctttaggtttgatagaattggtaagtttcaaacctcaaattacagcttgctctaaaaactctacag 47811852  T
Q  318 ccaatcttgttgatacaatattttg 342  Q
    |||||||||||| ||||||||||||    
T  47811851 ccaatcttgttggtacaatattttg 47811827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 124665 - 124625
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  124665 tagatatcataaaaatatttatttatgttaaaatagattaa 124625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 10012320 - 10012364
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||    
T  10012320 ttattatatatcataaaaatatttatttatgttaaaatagattaa 10012364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 47788597 - 47788531
Alignment:
Q  260 ttgatagaattggta---agtttcaaacctcaaattacagcttgctctaaaaattctacaaccaatc 323  Q
    |||||||||||||||   |||||||||||||||||||||||||| ||||| |||||||  |||||||    
T  47788597 ttgatagaattggtatgaagtttcaaacctcaaattacagcttggtctaataattctagcaccaatc 47788531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 831465 - 831428
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  831465 atatcataaaaatatttatttatgttaaaatagattaa 831428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 7307455 - 7307492
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  7307455 atatcataaaaatatttatttatgttaaaatagattaa 7307492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 9091235 - 9091198
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  9091235 atatcataaaaatatttatttatgttaaaatagattaa 9091198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 9997903 - 9997940
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  9997903 atatcataaaaatatttatttatgttaaaatagattaa 9997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 25990628 - 25990591
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  25990628 atatcataaaaatatttatttatgttaaaatagattaa 25990591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 28971030 - 28970993
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  28971030 atatcataaaaatatttatttatgttaaaatagattaa 28970993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 37419026 - 37418989
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  37419026 atatcataaaaatatttatttatgttaaaatagattaa 37418989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 49129550 - 49129587
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  49129550 atatcataaaaatatttatttatgttaaaatagattaa 49129587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 33126728 - 33126762
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagat 100  Q
    ||||||||||||||| |||||||||||||||||||    
T  33126728 atatcataaaaatatttatttatgttaaaatagat 33126762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 17109504 - 17109467
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  17109504 atattataaaaatatttatttatgttaaaatagattaa 17109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 18572125 - 18572088
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  18572125 atatcataaaaatatttatttatgttaaaattgattaa 18572088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 19998146 - 19998183
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  19998146 atatcatcaaaatatatatttatgttaaaatagattaa 19998183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 25087500 - 25087463
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  25087500 atattataaaaatatttatttatgttaaaatagattaa 25087463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 29345038 - 29345075
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  29345038 atattataaaaatatttatttatgttaaaatagattaa 29345075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 38294657 - 38294694
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  38294657 atatcataaaaatatttatttatgttaaaatatattaa 38294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 41574805 - 41574768
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  41574805 atattataaaaatatttatttatgttaaaatagattaa 41574768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 41575717 - 41575754
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  41575717 atatcataaaaatatttatttaagttaaaatagattaa 41575754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 45559639 - 45559676
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  45559639 atatcttaaaaatatttatttatgttaaaatagattaa 45559676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 45738199 - 45738162
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  45738199 atattataaaaatatttatttatgttaaaatagattaa 45738162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 46683219 - 46683256
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  46683219 atattataaaaatatttatttatgttaaaatagattaa 46683256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 47778458 - 47778409
Alignment:
Q  274 aagtttcaaacctcaaattacagcttgctctaaaaattctacaaccaatc 323  Q
    ||||||||||||||||||||||||| | ||||| |||||||  |||||||    
T  47778458 aagtttcaaacctcaaattacagctaggtctaacaattctagcaccaatc 47778409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 51612341 - 51612378
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  51612341 atatcataaaaatatttatttatgttaaaatatattaa 51612378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 23775930 - 23775970
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| || |||||||||||||||| |||||    
T  23775930 tagatatcataaaaagatttatttatgttaaaataaattaa 23775970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 50143579 - 50143547
Alignment:
Q  71 ataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||| ||||||||||||||||||||||    
T  50143579 ataaaaatatttatttatgttaaaatagattaa 50143547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 24758647 - 24758692
Alignment:
Q  58 gttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  24758647 gttattatatatcataaaaatatttatttatgttaaaatagattaa 24758692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 32023170 - 32023132
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaac 104  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  32023170 atatcataaaaatatttatttatgttaaaatagattaac 32023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 11942214 - 11942177
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11942214 atatcataaaaatatttatttatgttaaaatagattaa 11942177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 31709266 - 31709229
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  31709266 atatcataaaaatatttatttatgttaaaatagattaa 31709229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 32235836 - 32235873
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  32235836 atatcataaaaatatttatttatgttaaaatagattaa 32235873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 34830949 - 34830912
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  34830949 atatcataaaaatatttatttatgttaaaatagattaa 34830912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 40020298 - 40020261
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40020298 atatcataaaaatatttatttatgttaaaatagattaa 40020261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 41077693 - 41077656
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  41077693 atatcataaaaatatttatttatgttaaaatagattaa 41077656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 43439673 - 43439710
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  43439673 atatcataaaaatatttatttatgttaaaatagattaa 43439710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3045473 - 3045510
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  3045473 atatcataaaaatagttatttatgttaaaatagattaa 3045510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3515346 - 3515383
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  3515346 atatcataaaaatacttatttatgttaaaatagattaa 3515383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 6077418 - 6077385
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaataga 99  Q
    ||||||||||||||| ||||||||||||||||||    
T  6077418 atatcataaaaatatttatttatgttaaaataga 6077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 11052104 - 11052141
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  11052104 atatcataaaaatatttatttatcttaaaatagattaa 11052141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 11564343 - 11564380
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  11564343 atattataaaaatatatatttatgttaaaatagattaa 11564380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 11796685 - 11796722
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  11796685 atattataaaaatatttatttatgttaaaatagattaa 11796722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 12413779 - 12413816
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  12413779 atatcataaaaatatttatttatgttaaaacagattaa 12413816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 12425839 - 12425876
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  12425839 atatcataaaaatatttatttatgttaaaacagattaa 12425876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 13873860 - 13873897
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  13873860 atattataaaaatatttatttatgttaaaatagattaa 13873897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 14013985 - 14014022
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  14013985 atattataaaaatatttatttatgttaaaatagattaa 14014022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 14736331 - 14736294
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  14736331 atatcataaaaatatttatttatattaaaatagattaa 14736294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 14742701 - 14742664
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  14742701 atatcataaaaatatttatttatgttaaaataggttaa 14742664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 28167739 - 28167702
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  28167739 atatcacaaaaatatttatttatgttaaaatagattaa 28167702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 32879133 - 32879170
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  32879133 atatcataaaaatatttatttaagttaaaatagattaa 32879170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 33146234 - 33146197
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  33146234 atattataaaaatatttatttatgttaaaatagattaa 33146197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 33886813 - 33886850
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  33886813 atatcataaaaatatttatttaagttaaaatagattaa 33886850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 35658778 - 35658815
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  35658778 atattataaaaatatttatttatgttaaaatagattaa 35658815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 37329899 - 37329862
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  37329899 atattataaaaatatttatttatgttaaaatagattaa 37329862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 40769245 - 40769282
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  40769245 atattataaaaatatttatttatgttaaaatagattaa 40769282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 8727240 - 8727276
Alignment:
Q  67 tatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||| |||||||||||||| |||||||    
T  8727240 tatcataaaaatatttatttatgttaaaaaagattaa 8727276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 16600005 - 16600049
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| |||| |||||| ||| ||||||||||||||||||||||    
T  16600005 ttattatatataataaaattatttatttatgttaaaatagattaa 16600049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 17829586 - 17829630
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| | ||||| ||||||||||||||    
T  17829586 ttattatatatcataaaaatatttgtttatcttaaaatagattaa 17829630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 32387687 - 32387643
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||    
T  32387687 ttattatatatcataaaaatatttatttatgttaaaatagattaa 32387643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 46208398 - 46208348
Alignment:
Q  53 acaacgttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||| || ||||||||||||||| ||||||||||||||||||||||    
T  46208398 acaaagttagtatatatcataaaaatatttatttatgttaaaatagattaa 46208348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 5228052 - 5228015
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  5228052 atatcataaaaatatttatttatgttaaaatagattaa 5228015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 8379364 - 8379327
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  8379364 atatcataaaaatatttatttatgttaaaatagattaa 8379327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 29615716 - 29615679
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  29615716 atatcataaaaatatttatttatgttaaaatagattaa 29615679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 40401426 - 40401463
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40401426 atatcataaaaatatttatttatgttaaaatagattaa 40401463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 35783006 - 35782966
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  35783006 tagatatcgtaaaaatatttatttatgttaaaatagattaa 35782966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 7191759 - 7191720
Alignment:
Q  64 agatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  7191759 agatatcgtaaaaatatttatttatgttaaaatagattaa 7191720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 3391953 - 3391916
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  3391953 atattataaaaatatttatttatgttaaaatagattaa 3391916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 8123150 - 8123187
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  8123150 atattataaaaatatttatttatgttaaaatagattaa 8123187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 16425883 - 16425920
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  16425883 atattataaaaatatttatttatgttaaaatagattaa 16425920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 22711834 - 22711797
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  22711834 atattataaaaatatttatttatgttaaaatagattaa 22711797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23226537 - 23226500
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  23226537 atattataaaaatatttatttatgttaaaatagattaa 23226500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23235690 - 23235653
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  23235690 atattataaaaatatttatttatgttaaaatagattaa 23235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23727965 - 23727928
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  23727965 atatcataaaaatatttatttatgtcaaaatagattaa 23727928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 27144715 - 27144752
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  27144715 atatcataaaaatatttatttatgtttaaatagattaa 27144752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 28308545 - 28308582
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  28308545 atatcataaatatatttatttatgttaaaatagattaa 28308582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 28441948 - 28441911
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  28441948 atatcataaaaatatttatttatgctaaaatagattaa 28441911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 30870108 - 30870071
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  30870108 atatcataaaaatatttattaatgttaaaatagattaa 30870071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 32867444 - 32867407
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  32867444 atatcataaaaatatttatttatgtttaaatagattaa 32867407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 33576566 - 33576603
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  33576566 atatcataaaaatatttatttatgttaaaataaattaa 33576603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 33869822 - 33869859
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  33869822 atatcataaaaatatttatttatattaaaatagattaa 33869859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 36848372 - 36848409
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  36848372 atattataaaaatatttatttatgttaaaatagattaa 36848409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 40401756 - 40401719
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  40401756 atattataaaaatatttatttatgttaaaatagattaa 40401719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 45941652 - 45941615
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  45941652 atatcttaaaaatatttatttatgttaaaatagattaa 45941615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 552906 - 552946
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||| ||||||||| ||||||| ||||||||||||||    
T  552906 tagatatcgtaaaaatatttatttatattaaaatagattaa 552946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 46010999 - 46011031
Alignment:
Q  71 ataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||| ||||||||||||||||||||||    
T  46010999 ataaaaatatttatttatgttaaaatagattaa 46011031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 36762049 - 36762087
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaac 104  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  36762049 atatcataaaaatatttatttatgttaaaatagattaac 36762087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3933853 - 3933890
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  3933853 atatcataaaaatatttatttatgttaaaatagattaa 3933890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 4876910 - 4876873
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4876910 atatcataaaaatatttatttatgttaaaatagattaa 4876873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 12585808 - 12585771
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  12585808 atatcataaaaatatttatttatgttaaaatagattaa 12585771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 18523927 - 18523890
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  18523927 atatcataaaaatatttatttatgttaaaatagattaa 18523890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 27979431 - 27979394
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  27979431 atatcataaaaatatttatttatgttaaaatagattaa 27979394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 35751207 - 35751170
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  35751207 atatcataaaaatatttatttatgttaaaatagattaa 35751170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 24763879 - 24763919
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  24763879 tagatatcataaaaataattatttatgttaaaatagattaa 24763919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 32348346 - 32348390
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||||    
T  32348346 ttattatatatcataaaaatatttatttatattaaaatagattaa 32348390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 36742327 - 36742283
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| | ||||||||||||||||||||    
T  36742327 ttattatatatcataaaaatatttctttatgttaaaatagattaa 36742283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 5138839 - 5138876
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  5138839 atattataaaaatatttatttatgttaaaatagattaa 5138876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 6029813 - 6029776
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  6029813 atattataaaaatatttatttatgttaaaatagattaa 6029776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 10687788 - 10687751
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  10687788 atatcataaaaatatttatttatgttaaaataaattaa 10687751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 17968358 - 17968395
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  17968358 atatcataaaaatatttatttatgttaaaaaagattaa 17968395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 18338062 - 18338099
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  18338062 atattataaaaatatttatttatgttaaaatagattaa 18338099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 31601418 - 31601455
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  31601418 atattataaaaatatttatttatgttaaaatagattaa 31601455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 38497558 - 38497521
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  38497558 atatcataaaaatatttatttattttaaaatagattaa 38497521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 14594281 - 14594237
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| |||| ||| |||||| ||||||||||||||||||||||    
T  14594281 ttattatatattatacaaatatttatttatgttaaaatagattaa 14594237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 22730939 - 22730971
Alignment:
Q  71 ataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||| ||||||||||||||||||||||    
T  22730939 ataaaaatatttatttatgttaaaatagattaa 22730971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 42429062 - 42429022
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||||||| ||||| |||||||||| |||||    
T  42429062 tagatatcataaaaatatttatttttgttaaaatatattaa 42429022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 40036270 - 40036308
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaac 104  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  40036270 atatcataaaaatatttatttatgttaaaatagattaac 40036308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 1363927 - 1363964
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  1363927 atatcataaaaatatttatttatgttaaaatagattaa 1363964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 7724769 - 7724732
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  7724769 atatcataaaaatatttatttatgttaaaatagattaa 7724732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 11388602 - 11388565
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11388602 atatcataaaaatatttatttatgttaaaatagattaa 11388565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 26057627 - 26057664
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  26057627 atatcataaaaatatttatttatgttaaaatagattaa 26057664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 32221961 - 32221998
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  32221961 atatcataaaaatatttatttatgttaaaatagattaa 32221998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 44499918 - 44499955
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  44499918 atatcataaaaatatttatttatgttaaaatagattaa 44499955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 54403761 - 54403724
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  54403761 atatcataaaaatatttatttatgttaaaatagattaa 54403724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 8449687 - 8449727
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  8449687 tagatatcatagaaatatttatttatgttaaaatagattaa 8449727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 27394453 - 27394417
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagatta 102  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27394453 atatcataaaaatatttatttatgttaaaatagatta 27394417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3090293 - 3090330
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  3090293 atattataaaaatatttatttatgttaaaatagattaa 3090330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3540958 - 3540995
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  3540958 atattataaaaatatttatttatgttaaaatagattaa 3540995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 11345234 - 11345271
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  11345234 atattataaaaatatttatttatgttaaaatagattaa 11345271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 11397201 - 11397168
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaataga 99  Q
    ||||||||||||||| ||||||||||||||||||    
T  11397201 atatcataaaaatatttatttatgttaaaataga 11397168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 13625450 - 13625413
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  13625450 atattataaaaatatttatttatgttaaaatagattaa 13625413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 14600579 - 14600542
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  14600579 atattataaaaatatttatttatgttaaaatagattaa 14600542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 16067426 - 16067389
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  16067426 atattataaaaatatttatttatgttaaaatagattaa 16067389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 17058343 - 17058380
Alignment:
Q  72 taaaaatatctatttatgttaaaatagattaactttta 109  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  17058343 taaaaatatttatttatgttaaaatagattaaatttta 17058380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 25084158 - 25084195
Alignment:
Q  134 tctctaaagagagaagtatgtaatttactcaaaataaa 171  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  25084158 tctcttaagagagaagaatgtaatttactcaaaataaa 25084195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 25259440 - 25259403
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  25259440 atatcataaaaatatatatttatattaaaatagattaa 25259403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 25480729 - 25480692
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  25480729 atattataaaaatatttatttatgttaaaatagattaa 25480692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 27639024 - 27639061
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  27639024 atattataaaaatatttatttatgttaaaatagattaa 27639061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 50383596 - 50383559
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  50383596 atatcataaaaatatttatttatgttcaaatagattaa 50383559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 27117005 - 27116965
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||||||| ||||||||| ||||| ||||||    
T  27117005 tagatatcataaaaatatttatttatgtaaaaatggattaa 27116965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 48841902 - 48841934
Alignment:
Q  71 ataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||| ||||||||||||||||||||||    
T  48841902 ataaaaatatttatttatgttaaaatagattaa 48841934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 25417 - 25380
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  25417 atatcataaaaatatttatttatgttaaaatagattaa 25380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 351468 - 351431
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  351468 atatcataaaaatatatatttatgttaaaatagattaa 351431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 185059 - 185096
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  185059 atatcataaaaatatttatttatgttaaaatagattaa 185096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3940092 - 3940129
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  3940092 atatcataaaaatatttatttatgttaaaatagattaa 3940129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 24809786 - 24809749
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  24809786 atatcataaaaatatttatttatgttaaaatagattaa 24809749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 33972846 - 33972883
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  33972846 atatcataaaaatatttatttatgttaaaatagattaa 33972883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 36016635 - 36016672
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36016635 atatcataaaaatatttatttatgttaaaatagattaa 36016672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 37304429 - 37304392
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  37304429 atatcataaaaatatttatttatgttaaaatagattaa 37304392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 42861992 - 42862029
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  42861992 atatcataaaaatatttatttatgttaaaatagattaa 42862029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 43776870 - 43776907
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  43776870 atatcataaaaatatttatttatgttaaaatagattaa 43776907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 44284225 - 44284262
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  44284225 atatcataaaaatatttatttatgttaaaatagattaa 44284262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 14094018 - 14094062
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||    
T  14094018 ttattatatatcataaaaatatttatttaagttaaaatagattaa 14094062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 34925281 - 34925317
Alignment:
Q  67 tatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||| ||||||||||||||||||||||    
T  34925281 tatcataaaaatatttatttatgttaaaatagattaa 34925317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 8443200 - 8443237
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  8443200 atattataaaaatatttatttatgttaaaatagattaa 8443237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 12336175 - 12336212
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  12336175 atatcataaaaataattatttatgttaaaatagattaa 12336212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 13421614 - 13421577
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  13421614 atattataaaaatatttatttatgttaaaatagattaa 13421577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 14879722 - 14879685
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  14879722 atattataaaaatatttatttatgttaaaatagattaa 14879685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 15676702 - 15676743
Alignment:
Q  58 gttattagatatcataaaaatatctatttatgttaaaataga 99  Q
    |||| |||||||||||||||||| ||| ||||||||||||||    
T  15676702 gttagtagatatcataaaaatatttatatatgttaaaataga 15676743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 17564869 - 17564832
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  17564869 atattataaaaatatttatttatgttaaaatagattaa 17564832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 17734787 - 17734824
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  17734787 atatcataaaaatatttatttatgttaaaattgattaa 17734824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 21304508 - 21304545
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  21304508 atatcataaaaatatttatttatattaaaatagattaa 21304545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 30056488 - 30056451
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  30056488 atattataaaaatatttatttatgttaaaatagattaa 30056451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 30354402 - 30354439
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  30354402 atattataaaaatatttatttatgttaaaatagattaa 30354439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 32904858 - 32904821
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  32904858 atattataaaaatatttatttatgttaaaatagattaa 32904821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 33969435 - 33969472
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  33969435 atatcataaaaatatttatttatgttaaaattgattaa 33969472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 37872742 - 37872779
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  37872742 atatcataaaaatatttctttatgttaaaatagattaa 37872779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 40791248 - 40791211
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  40791248 atatcataaaaatatttatttatattaaaatagattaa 40791211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 31846942 - 31846978
Alignment:
Q  67 tatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||| |||||||| |||||||||||||    
T  31846942 tatcataaaaatatttatttatgctaaaatagattaa 31846978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 32903801 - 32903757
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| |||| |||||||||| |||| |||||||||||||||||    
T  32903801 ttattatatataataaaaatatttattaatgttaaaatagattaa 32903757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 35366866 - 35366905
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  35366866 tagatatcataaaaatattta-ttatgttaaaatagattaa 35366905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 44746371 - 44746339
Alignment:
Q  71 ataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||| ||||||||||||||||||||||    
T  44746371 ataaaaatatttatttatgttaaaatagattaa 44746339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 2655137 - 2655100
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  2655137 atatcataaaaatatttatttatgttaaaatagattaa 2655100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 2661337 - 2661300
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  2661337 atatcataaaaatatttatttatgttaaaatagattaa 2661300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 6937779 - 6937816
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  6937779 atatcataaaaatatttatttatgttaaaatagattaa 6937816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 10702809 - 10702846
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10702809 atatcataaaaatatttatttatgttaaaatagattaa 10702846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 13444051 - 13444014
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  13444051 atatcataaaaatatttatttatgttaaaatagattaa 13444014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 14224365 - 14224402
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14224365 atatcataaaaatatttatttatgttaaaatagattaa 14224402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 28494307 - 28494270
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  28494307 atatcataaaaatatttatttatgttaaaatagattaa 28494270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 29806716 - 29806679
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  29806716 atatcataaaaatatttatttatgttaaaatagattaa 29806679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 32114282 - 32114319
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  32114282 atatcataaaaatatttatttatgttaaaatagattaa 32114319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 34250578 - 34250618
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  34250578 tagatattataaaaatatttatttatgttaaaatagattaa 34250618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 2773143 - 2773100
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagatta 102  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||    
T  2773143 ttattagatatcataaaaatatttatttatattaaaatatatta 2773100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 2092214 - 2092251
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  2092214 atattataaaaatatttatttatgttaaaatagattaa 2092251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 12767481 - 12767518
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||||  |||||||||||||||||||||    
T  12767481 atatcataaaaatattaatttatgttaaaatagattaa 12767518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 13489664 - 13489631
Alignment:
Q  68 atcataaaaatatctatttatgttaaaatagatt 101  Q
    ||||||||||||| ||||||||||||||||||||    
T  13489664 atcataaaaatatttatttatgttaaaatagatt 13489631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 14306991 - 14306954
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  14306991 atattataaaaatatttatttatgttaaaatagattaa 14306954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 14313391 - 14313354
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  14313391 atattataaaaatatttatttatgttaaaatagattaa 14313354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 17311626 - 17311589
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  17311626 atatcataaaaatatttatttatgttaaaatatattaa 17311589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 21802479 - 21802516
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  21802479 atattataaaaatatttatttatgttaaaatagattaa 21802516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 22268919 - 22268956
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  22268919 atatcataaaaatatttatttatgttaaaattgattaa 22268956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 30461636 - 30461603
Alignment:
Q  70 cataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||| ||||||||||||||||||||||    
T  30461636 cataaaaatatttatttatgttaaaatagattaa 30461603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 31282120 - 31282157
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  31282120 atatcatacaaatatttatttatgttaaaatagattaa 31282157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 33950760 - 33950797
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  33950760 atattataaaaatatttatttatgttaaaatagattaa 33950797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 16852458 - 16852498
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||  ||||||||| ||||||||||||||||||||||    
T  16852458 tagatattgtaaaaatatttatttatgttaaaatagattaa 16852498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 26808581 - 26808544
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  26808581 atatcataaaaatatttatttatgttaaaatagattaa 26808544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 33046760 - 33046723
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  33046760 atatcataaaaatatttatttatgttaaaatagattaa 33046723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 37709444 - 37709481
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  37709444 atatcataaaaatatttatttatgttaaaatagattaa 37709481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 51019851 - 51019814
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  51019851 atatcataaaaatatttatttatgttaaaatagattaa 51019814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 53305872 - 53305835
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  53305872 atatcataaaaatatttatttatgttaaaatagattaa 53305835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 32448816 - 32448852
Alignment:
Q  67 tatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||| ||||||||||||||||||||||    
T  32448816 tatcataaaaatatttatttatgttaaaatagattaa 32448852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 36897967 - 36898011
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||    
T  36897967 ttattatatatcataaaaatatttatttaagttaaaatagattaa 36898011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 38051431 - 38051467
Alignment:
Q  67 tatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||| ||||||||||||||||||||||    
T  38051431 tatcataaaaatatttatttatgttaaaatagattaa 38051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 48372622 - 48372578
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||    
T  48372622 ttattatatatcataaaaatatttatttaagttaaaatagattaa 48372578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 6233327 - 6233290
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  6233327 atatcataaaaatatttatttatgtttaaatagattaa 6233290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 7797488 - 7797525
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  7797488 atattataaaaatatttatttatgttaaaatagattaa 7797525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 10556127 - 10556164
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  10556127 atatcataaaaatatttatttatattaaaatagattaa 10556164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 18362572 - 18362609
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  18362572 atattataaaaatatttatttatgttaaaatagattaa 18362609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 21037498 - 21037461
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  21037498 atatcataaaaatatttatttatgttaaaataaattaa 21037461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 29429574 - 29429611
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||||  |||||||||||||||||||||    
T  29429574 atatcataaaaatattgatttatgttaaaatagattaa 29429611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 35853758 - 35853721
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  35853758 atattataaaaatatttatttatgttaaaatagattaa 35853721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 36600354 - 36600317
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  36600354 atattataaaaatatttatttatgttaaaatagattaa 36600317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 36687040 - 36687003
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  36687040 atatcataaaaatatttatttatgttaaaatacattaa 36687003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 37424322 - 37424359
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  37424322 atattataaaaatatttatttatgttaaaatagattaa 37424359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 39100422 - 39100385
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  39100422 atattataaaaatatttatttatgttaaaatagattaa 39100385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 50825160 - 50825197
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  50825160 atattataaaaatatttatttatgttaaaatagattaa 50825197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 55139885 - 55139922
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  55139885 atatcataaaaatatttatttatcttaaaatagattaa 55139922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 56309614 - 56309577
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  56309614 atatcataaaaatatttatttatgttaaaatatattaa 56309577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 4964104 - 4964060
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| ||||||||| |||||| |||||    
T  4964104 ttattatatatcataaaaatatttatttatgtcaaaataaattaa 4964060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 6711426 - 6711394
Alignment:
Q  71 ataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||| ||||||||||||||||||||||    
T  6711426 ataaaaatatttatttatgttaaaatagattaa 6711394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 19313552 - 19313508
Alignment:
Q  59 ttattagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||| ||||||||||||||| | ||||| ||||||||||||||    
T  19313552 ttattatatatcataaaaatatttttttatcttaaaatagattaa 19313508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 46490562 - 46490602
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  46490562 tagatatcgtaaaaatatttatttatgttaaaatatattaa 46490602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 48334638 - 48334674
Alignment:
Q  67 tatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  48334638 tatcataaaaatatttatttattttaaaatagattaa 48334674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 6376 - 6416
Alignment:
Q  63 tagatatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  6376 tagatatcataaaaataattatttatgttaaaatagattaa 6416  T

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Target: scaffold0201 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 15523 - 15486
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  15523 atattataaaaatatttatttatgttaaaatagattaa 15486  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 59460 - 59423
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  59460 atattataaaaatatttatttatgttaaaatagattaa 59423  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 14596 - 14633
Alignment:
Q  66 atatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  14596 atattataaaaatatttatttatgttaaaatagattaa 14633  T

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Target: scaffold0289 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 3925 - 3957
Alignment:
Q  71 ataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||| ||||||||||||||||||||||    
T  3925 ataaaaatatttatttatgttaaaatagattaa 3957  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 22160 - 22196
Alignment:
Q  67 tatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  22160 tatcataaaaatatttatttattttaaaatagattaa 22196  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 161455 - 161419
Alignment:
Q  67 tatcataaaaatatctatttatgttaaaatagattaa 103  Q
    |||||||||||||| |||||||||||||||| |||||    
T  161455 tatcataaaaatatttatttatgttaaaataaattaa 161419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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