View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14173_low_8 (Length: 337)
Name: NF14173_low_8
Description: NF14173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14173_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 19 - 321
Target Start/End: Original strand, 38967439 - 38967741
Alignment:
| Q |
19 |
atcttgaaattgcattttgcataagatgagttcagaccatgtacatgacacatccggatcctaaaatctgggtaaaattactttcttgaggtgggaattt |
118 |
Q |
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| T |
38967439 |
atcttgaaattgcattttgcataagatgagttcagaccatgtaaatgacacatccggatcctaaaatctgggtaaaattactttcttgaggtgggaattt |
38967538 |
T |
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| Q |
119 |
taaaattgggatgtgtaatttttnnnnnnnnngtaggtaaccacggttaaatcatggttaatttttcttactcagtagatgaacacgcacacatttacac |
218 |
Q |
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| T |
38967539 |
taaaattgggatgtgtaattttttaaaaaaaagtaggtaaccacggttaaatcatggttaatttttcttactcagtagatgaacacgcacacatttacac |
38967638 |
T |
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| Q |
219 |
attataaaacggattcaaattctaaaatccaaaaattggtaaaagaattgcactaagcttatgcttatgcatttaatttggttcacttgtgtttagatta |
318 |
Q |
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| T |
38967639 |
attataaaacggattcaaattctaaaatccaaaaattggtaaaagaattgcactaagcttatgcttatgcatttaatttggttcacttgtgtttagatta |
38967738 |
T |
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| Q |
319 |
ttt |
321 |
Q |
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| T |
38967739 |
ttt |
38967741 |
T |
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