View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14175_low_10 (Length: 253)
Name: NF14175_low_10
Description: NF14175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14175_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 24096433 - 24096675
Alignment:
| Q |
1 |
tttttcagaggaaaaaagaataacatgttaccgaaaatttagaaaagaacattattctttgtaatagaaaatgagaaaagaatatattcttatctttcgc |
100 |
Q |
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| T |
24096433 |
tttttcagaggaaaaaagaataacatgtaaccgaaaatttagaaaagaacattattctttgtaatagaaaatgagaaaagaatatattcttatctttcgc |
24096532 |
T |
|
| Q |
101 |
tagatttgaattatactttttgtcgggaggataatttgccaaaaggccaatagattaatatgaaattgaattctctccatccaggttcagatctcaaaca |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24096533 |
tagatttgtattatactttttgtcgggaggataatttgccaaaaggccaatagattaatatgaaattgaattctctccatccaggttcagatctcaaaca |
24096632 |
T |
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| Q |
201 |
aaattttaagtttgagatctaaatccttatgcaatcaatgatg |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24096633 |
aaattttaagtttgagatctaaatccttatgcaatcaatgatg |
24096675 |
T |
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