View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14176_high_14 (Length: 264)
Name: NF14176_high_14
Description: NF14176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14176_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 48132527 - 48132306
Alignment:
| Q |
25 |
atgccatgcacagaaattgttaggaagagaaggagtggatggacaagtatgtgtgcaaaattcatggccaattctaatagcaataaagtttctgatgaag |
124 |
Q |
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| T |
48132527 |
atgccatgcacagaaattgttaggaagagaaggagtggatggacaagtatgtgtgcaaaattcatggccaattctaatagcaataaagtttctgatgaag |
48132428 |
T |
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| Q |
125 |
atatggctactagtatgattagtagaagaaaaggagttcctcatagatctcctctttgttaattagtgttagctaccttaatcaataaaattaagctaag |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48132427 |
atatggctactagtatgattagtagaagaaaaggagttcctcatagatctcctctttgttaattagtgttagctaccttaatcaataaaattaagctaag |
48132328 |
T |
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| Q |
225 |
ctaagcagtagcacaaagagct |
246 |
Q |
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|||||||||||||||||||||| |
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| T |
48132327 |
ctaagcagtagcacaaagagct |
48132306 |
T |
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