View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14177_high_35 (Length: 351)

Name: NF14177_high_35
Description: NF14177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14177_high_35
NF14177_high_35
[»] chr7 (55 HSPs)
chr7 (207-339)||(9863152-9863284)
chr7 (209-339)||(17506832-17506962)
chr7 (209-339)||(17546252-17546382)
chr7 (209-339)||(13734549-13734679)
chr7 (209-339)||(41283005-41283135)
chr7 (210-339)||(13396581-13396710)
chr7 (209-339)||(1501424-1501554)
chr7 (208-339)||(38413859-38413990)
chr7 (209-336)||(14266671-14266800)
chr7 (133-208)||(16567486-16567561)
chr7 (133-208)||(16598101-16598176)
chr7 (133-208)||(46181132-46181207)
chr7 (133-208)||(19804957-19805032)
chr7 (207-339)||(17065002-17065137)
chr7 (209-336)||(14256462-14256591)
chr7 (133-194)||(46783007-46783068)
chr7 (133-185)||(5023333-5023385)
chr7 (133-205)||(39414497-39414569)
chr7 (133-208)||(27398499-27398574)
chr7 (134-185)||(35092856-35092907)
chr7 (279-327)||(13773179-13773227)
chr7 (133-208)||(10066379-10066454)
chr7 (209-324)||(15724744-15724858)
chr7 (209-327)||(12202734-12202851)
chr7 (209-324)||(13407114-13407230)
chr7 (267-336)||(16669234-16669303)
chr7 (267-336)||(17643602-17643671)
chr7 (285-325)||(15732460-15732500)
chr7 (279-326)||(10629158-10629205)
chr7 (279-326)||(10638853-10638900)
chr7 (133-208)||(17172339-17172414)
chr7 (250-336)||(19144983-19145069)
chr7 (250-336)||(20744382-20744468)
chr7 (208-324)||(21736116-21736233)
chr7 (250-327)||(16074633-16074710)
chr7 (268-333)||(23441673-23441738)
chr7 (141-182)||(43224251-43224292)
chr7 (143-208)||(48558804-48558869)
chr7 (280-324)||(39996521-39996565)
chr7 (140-203)||(3551658-3551721)
chr7 (140-182)||(4912818-4912861)
chr7 (228-310)||(15141599-15141682)
chr7 (133-208)||(40789651-40789726)
chr7 (133-208)||(44300632-44300707)
chr7 (133-183)||(3362874-3362924)
chr7 (249-335)||(11308393-11308478)
chr7 (249-335)||(11311701-11311786)
chr7 (249-335)||(12684678-12684763)
chr7 (134-204)||(42284425-42284495)
chr7 (140-182)||(43702548-43702590)
chr7 (140-185)||(31454824-31454869)
chr7 (123-208)||(33978734-33978819)
chr7 (267-332)||(41783801-41783866)
chr7 (156-208)||(34152477-34152529)
chr7 (156-208)||(34174595-34174647)
[»] chr5 (37 HSPs)
chr5 (208-339)||(26494771-26494902)
chr5 (208-339)||(26362070-26362201)
chr5 (208-339)||(27870480-27870611)
chr5 (209-339)||(23670790-23670920)
chr5 (133-208)||(14088182-14088257)
chr5 (133-208)||(14087577-14087652)
chr5 (249-339)||(17023551-17023640)
chr5 (133-208)||(15719301-15719376)
chr5 (133-208)||(31149815-31149890)
chr5 (134-208)||(6224952-6225026)
chr5 (140-208)||(41616504-41616572)
chr5 (133-208)||(14645229-14645303)
chr5 (209-327)||(21560146-21560263)
chr5 (209-327)||(21981694-21981811)
chr5 (247-336)||(21636761-21636850)
chr5 (133-205)||(22632367-22632439)
chr5 (133-184)||(6277958-6278009)
chr5 (133-183)||(38309688-38309738)
chr5 (140-208)||(4902060-4902128)
chr5 (279-327)||(21999073-21999121)
chr5 (140-183)||(4572188-4572231)
chr5 (133-208)||(7977944-7978019)
chr5 (141-208)||(15674098-15674165)
chr5 (208-327)||(26705656-26705774)
chr5 (208-327)||(26975389-26975507)
chr5 (133-208)||(29455704-29455779)
chr5 (124-183)||(30774710-30774769)
chr5 (141-208)||(33347195-33347262)
chr5 (133-184)||(34718927-34718978)
chr5 (133-184)||(41692611-41692662)
chr5 (134-184)||(19254631-19254681)
chr5 (250-327)||(25013060-25013137)
chr5 (133-182)||(41983161-41983210)
chr5 (250-306)||(7774381-7774437)
chr5 (279-327)||(8953668-8953716)
chr5 (124-184)||(15023458-15023518)
chr5 (133-169)||(36470608-36470644)
[»] scaffold0525 (1 HSPs)
scaffold0525 (209-339)||(7971-8101)
[»] chr3 (40 HSPs)
chr3 (209-339)||(53223643-53223773)
chr3 (125-183)||(13735777-13735835)
chr3 (133-208)||(50481188-50481263)
chr3 (247-339)||(15012702-15012795)
chr3 (134-207)||(23299646-23299719)
chr3 (133-208)||(24987531-24987606)
chr3 (133-208)||(44792767-44792842)
chr3 (123-208)||(38694938-38695023)
chr3 (134-183)||(39352375-39352424)
chr3 (124-208)||(19872992-19873076)
chr3 (141-208)||(19618601-19618668)
chr3 (133-208)||(45079330-45079405)
chr3 (133-182)||(5041204-5041253)
chr3 (247-336)||(21081939-21082028)
chr3 (209-328)||(9224-9344)
chr3 (141-185)||(39961419-39961463)
chr3 (133-185)||(49359870-49359922)
chr3 (133-208)||(10085385-10085460)
chr3 (133-208)||(10192305-10192380)
chr3 (133-172)||(11671743-11671782)
chr3 (133-184)||(30248202-30248253)
chr3 (133-208)||(41410382-41410457)
chr3 (133-183)||(36692008-36692058)
chr3 (127-185)||(41923871-41923929)
chr3 (208-322)||(42108438-42108553)
chr3 (279-336)||(12856646-12856703)
chr3 (250-327)||(13037600-13037677)
chr3 (250-327)||(13043965-13044042)
chr3 (282-327)||(15231525-15231570)
chr3 (282-327)||(15237393-15237438)
chr3 (133-182)||(25467394-25467443)
chr3 (133-182)||(48079982-48080031)
chr3 (249-327)||(35984091-35984167)
chr3 (140-182)||(40563854-40563896)
chr3 (278-324)||(54045872-54045918)
chr3 (250-327)||(12273656-12273733)
chr3 (138-195)||(51055372-51055429)
chr3 (279-327)||(15221709-15221757)
chr3 (141-185)||(22845275-22845319)
chr3 (133-185)||(46819068-46819120)
[»] chr2 (41 HSPs)
chr2 (209-339)||(21240222-21240352)
chr2 (208-339)||(23340291-23340422)
chr2 (208-339)||(37378395-37378526)
chr2 (209-339)||(21242772-21242902)
chr2 (209-336)||(21124604-21124733)
chr2 (278-339)||(31502523-31502584)
chr2 (278-339)||(31505089-31505150)
chr2 (133-208)||(32422861-32422936)
chr2 (133-208)||(3329100-3329175)
chr2 (133-208)||(25424663-25424738)
chr2 (133-208)||(33867666-33867741)
chr2 (209-339)||(23147915-23148047)
chr2 (209-339)||(23559705-23559837)
chr2 (279-326)||(10040973-10041020)
chr2 (133-208)||(31440756-31440831)
chr2 (133-208)||(38620301-38620376)
chr2 (209-322)||(20354060-20354172)
chr2 (208-325)||(23079225-23079341)
chr2 (278-325)||(22108743-22108790)
chr2 (209-312)||(31517590-31517692)
chr2 (208-281)||(17629828-17629902)
chr2 (249-335)||(24683311-24683397)
chr2 (135-208)||(20936958-20937031)
chr2 (133-185)||(4480971-4481023)
chr2 (279-327)||(6479187-6479235)
chr2 (140-197)||(9205094-9205151)
chr2 (279-327)||(23084754-23084803)
chr2 (140-185)||(30241358-30241402)
chr2 (133-185)||(23231646-23231698)
chr2 (133-185)||(29546239-29546291)
chr2 (133-208)||(44070525-44070601)
chr2 (133-208)||(668091-668166)
chr2 (133-208)||(4289549-4289624)
chr2 (134-193)||(40475383-40475442)
chr2 (134-193)||(40507730-40507789)
chr2 (249-327)||(24528020-24528098)
chr2 (124-204)||(8027576-8027657)
chr2 (135-183)||(4592340-4592388)
chr2 (135-183)||(16711489-16711537)
chr2 (208-327)||(25650473-25650591)
chr2 (140-208)||(35048539-35048607)
[»] scaffold1885 (1 HSPs)
scaffold1885 (209-338)||(1051-1180)
[»] chr4 (58 HSPs)
chr4 (208-339)||(33847772-33847903)
chr4 (209-339)||(1103602-1103732)
chr4 (209-339)||(28384211-28384341)
chr4 (203-339)||(15722642-15722778)
chr4 (209-339)||(16279349-16279479)
chr4 (207-339)||(53388717-53388849)
chr4 (209-339)||(15281142-15281272)
chr4 (133-208)||(21075752-21075827)
chr4 (225-324)||(18220484-18220585)
chr4 (133-208)||(12185701-12185776)
chr4 (133-208)||(12187693-12187768)
chr4 (122-205)||(23147325-23147408)
chr4 (133-208)||(29149129-29149204)
chr4 (133-208)||(42053381-42053456)
chr4 (286-339)||(41790645-41790698)
chr4 (123-208)||(52595457-52595542)
chr4 (133-208)||(3387329-3387404)
chr4 (133-208)||(14576714-14576789)
chr4 (125-208)||(22313468-22313551)
chr4 (133-208)||(32655635-32655710)
chr4 (133-208)||(52180891-52180966)
chr4 (133-206)||(8065887-8065960)
chr4 (278-327)||(13876992-13877041)
chr4 (133-208)||(28234285-28234360)
chr4 (124-183)||(38000510-38000569)
chr4 (133-208)||(42755263-42755338)
chr4 (125-183)||(21245753-21245811)
chr4 (121-184)||(52013718-52013781)
chr4 (133-183)||(4757073-4757123)
chr4 (124-182)||(7250647-7250705)
chr4 (208-339)||(29856106-29856240)
chr4 (134-183)||(3098055-3098104)
chr4 (278-326)||(28916339-28916387)
chr4 (140-208)||(34459744-34459812)
chr4 (133-185)||(54932864-54932916)
chr4 (133-208)||(2721346-2721421)
chr4 (209-324)||(16372518-16372632)
chr4 (133-184)||(22247794-22247845)
chr4 (133-184)||(29406010-29406061)
chr4 (133-184)||(45097484-45097535)
chr4 (133-208)||(53140533-53140608)
chr4 (134-205)||(2225073-2225146)
chr4 (278-324)||(15243217-15243263)
chr4 (133-199)||(26340369-26340435)
chr4 (133-183)||(54979280-54979330)
chr4 (133-182)||(2073751-2073800)
chr4 (133-182)||(29994242-29994291)
chr4 (123-208)||(33983049-33983134)
chr4 (278-322)||(13880408-13880452)
chr4 (208-324)||(15417557-15417671)
chr4 (250-310)||(16484035-16484095)
chr4 (133-185)||(22829672-22829724)
chr4 (140-208)||(25938294-25938362)
chr4 (133-184)||(39804193-39804244)
chr4 (133-184)||(46080640-46080691)
chr4 (278-324)||(27026888-27026934)
chr4 (161-205)||(652195-652239)
chr4 (133-185)||(46258111-46258163)
[»] chr6 (41 HSPs)
chr6 (209-339)||(2288960-2289090)
chr6 (209-339)||(22590935-22591065)
chr6 (209-339)||(22586104-22586234)
chr6 (209-339)||(15687244-15687374)
chr6 (208-339)||(8521805-8521936)
chr6 (209-283)||(25803823-25803897)
chr6 (207-325)||(1638388-1638505)
chr6 (133-207)||(33328508-33328582)
chr6 (209-336)||(35243914-35244044)
chr6 (207-325)||(1641415-1641532)
chr6 (249-335)||(29264867-29264952)
chr6 (133-208)||(13534307-13534383)
chr6 (249-335)||(21475685-21475770)
chr6 (133-207)||(33331520-33331594)
chr6 (278-327)||(23622094-23622143)
chr6 (135-208)||(31784088-31784161)
chr6 (247-339)||(18136853-18136945)
chr6 (141-208)||(1329677-1329744)
chr6 (209-324)||(1591307-1591421)
chr6 (209-324)||(17525673-17525786)
chr6 (279-326)||(19445130-19445177)
chr6 (133-208)||(20691704-20691779)
chr6 (209-339)||(16886343-16886474)
chr6 (249-335)||(21469084-21469169)
chr6 (285-325)||(1583661-1583701)
chr6 (133-208)||(6337153-6337228)
chr6 (135-182)||(6937978-6938025)
chr6 (279-326)||(16134457-16134504)
chr6 (209-310)||(18316707-18316810)
chr6 (209-335)||(22345926-22346052)
chr6 (133-208)||(24447240-24447315)
chr6 (133-208)||(29641568-29641643)
chr6 (133-207)||(1221830-1221904)
chr6 (209-327)||(24440227-24440344)
chr6 (249-333)||(25748899-25748983)
chr6 (133-184)||(9062285-9062336)
chr6 (128-183)||(31511772-31511827)
chr6 (140-185)||(21455572-21455617)
chr6 (250-327)||(22799186-22799263)
chr6 (250-327)||(23104613-23104690)
chr6 (267-327)||(25749133-25749193)
[»] chr1 (44 HSPs)
chr1 (209-339)||(21107889-21108019)
chr1 (209-339)||(37357508-37357638)
chr1 (209-339)||(295471-295601)
chr1 (133-208)||(42069238-42069313)
chr1 (133-208)||(25815447-25815522)
chr1 (133-197)||(29054737-29054801)
chr1 (133-208)||(13312645-13312720)
chr1 (124-182)||(945383-945441)
chr1 (133-207)||(2978331-2978405)
chr1 (209-327)||(18822790-18822907)
chr1 (212-336)||(21987666-21987792)
chr1 (124-208)||(27783417-27783502)
chr1 (133-205)||(7842479-7842551)
chr1 (133-197)||(9222155-9222219)
chr1 (133-185)||(35978652-35978704)
chr1 (133-185)||(48964517-48964569)
chr1 (279-326)||(13529696-13529743)
chr1 (133-208)||(28220880-28220955)
chr1 (133-208)||(424481-424558)
chr1 (278-324)||(21118801-21118847)
chr1 (278-327)||(18251411-18251460)
chr1 (278-327)||(18269423-18269472)
chr1 (278-327)||(18274101-18274150)
chr1 (134-182)||(21260881-21260929)
chr1 (133-208)||(4893413-4893488)
chr1 (133-208)||(19996796-19996871)
chr1 (247-310)||(21738039-21738102)
chr1 (250-336)||(21746415-21746502)
chr1 (133-208)||(29184999-29185074)
chr1 (133-208)||(33363016-33363091)
chr1 (135-193)||(236276-236334)
chr1 (208-327)||(21529529-21529650)
chr1 (124-182)||(38491322-38491380)
chr1 (209-326)||(16398063-16398180)
chr1 (209-326)||(16399887-16400004)
chr1 (124-208)||(47662178-47662262)
chr1 (133-184)||(20414880-20414931)
chr1 (133-208)||(43634759-43634834)
chr1 (135-185)||(2501487-2501537)
chr1 (249-335)||(11810430-11810515)
chr1 (143-185)||(12560714-12560756)
chr1 (209-327)||(20087162-20087283)
chr1 (133-183)||(44328070-44328120)
chr1 (250-310)||(41311574-41311633)
[»] scaffold0021 (2 HSPs)
scaffold0021 (209-339)||(134943-135073)
scaffold0021 (209-339)||(143651-143781)
[»] chr8 (28 HSPs)
chr8 (209-339)||(17794278-17794408)
chr8 (18-117)||(24803802-24803901)
chr8 (209-327)||(22435348-22435465)
chr8 (133-208)||(3616985-3617060)
chr8 (209-327)||(33087497-33087615)
chr8 (209-339)||(22522559-22522692)
chr8 (278-326)||(15005555-15005603)
chr8 (124-182)||(2621107-2621165)
chr8 (209-327)||(20384477-20384594)
chr8 (278-324)||(21414253-21414299)
chr8 (247-336)||(25625423-25625513)
chr8 (134-205)||(24789426-24789497)
chr8 (133-208)||(37226893-37226968)
chr8 (134-182)||(1667182-1667230)
chr8 (133-208)||(2472401-2472476)
chr8 (278-333)||(32948955-32949010)
chr8 (209-327)||(17273429-17273546)
chr8 (209-336)||(21838868-21838998)
chr8 (209-339)||(15266479-15266611)
chr8 (133-205)||(1376098-1376170)
chr8 (133-208)||(7579970-7580045)
chr8 (133-208)||(20216120-20216195)
chr8 (133-208)||(20235718-20235793)
chr8 (208-328)||(20021074-20021197)
chr8 (134-182)||(24891564-24891613)
chr8 (249-322)||(39362881-39362953)
chr8 (134-182)||(6109536-6109584)
chr8 (141-185)||(38019969-38020013)
[»] scaffold0094 (1 HSPs)
scaffold0094 (209-339)||(43806-43936)
[»] scaffold0008 (1 HSPs)
scaffold0008 (209-336)||(125638-125767)
[»] scaffold0130 (1 HSPs)
scaffold0130 (247-327)||(12098-12178)
[»] scaffold0005 (1 HSPs)
scaffold0005 (133-208)||(240586-240661)
[»] scaffold0859 (1 HSPs)
scaffold0859 (209-327)||(836-953)
[»] scaffold0447 (1 HSPs)
scaffold0447 (279-329)||(13221-13271)
[»] scaffold0383 (1 HSPs)
scaffold0383 (279-329)||(11216-11266)
[»] scaffold0253 (1 HSPs)
scaffold0253 (267-336)||(4634-4703)
[»] scaffold0609 (1 HSPs)
scaffold0609 (278-326)||(8884-8932)
[»] scaffold0575 (2 HSPs)
scaffold0575 (208-335)||(7910-8038)
scaffold0575 (249-335)||(737-822)
[»] scaffold0013 (1 HSPs)
scaffold0013 (247-339)||(890-982)
[»] scaffold0635 (1 HSPs)
scaffold0635 (279-326)||(6050-6097)
[»] scaffold0192 (2 HSPs)
scaffold0192 (249-336)||(20155-20242)
scaffold0192 (249-336)||(30822-30909)
[»] scaffold0028 (1 HSPs)
scaffold0028 (249-336)||(93409-93496)
[»] scaffold1336 (1 HSPs)
scaffold1336 (267-333)||(1496-1562)
[»] scaffold0956 (1 HSPs)
scaffold0956 (249-335)||(3215-3300)
[»] scaffold0049 (2 HSPs)
scaffold0049 (209-336)||(43618-43748)
scaffold0049 (247-336)||(54116-54208)
[»] scaffold0023 (1 HSPs)
scaffold0023 (278-324)||(157909-157955)
[»] scaffold0486 (1 HSPs)
scaffold0486 (208-336)||(2278-2408)
[»] scaffold0016 (2 HSPs)
scaffold0016 (209-307)||(119385-119485)
scaffold0016 (208-324)||(198544-198658)
[»] scaffold0503 (1 HSPs)
scaffold0503 (247-336)||(3129-3219)
[»] scaffold0462 (1 HSPs)
scaffold0462 (208-339)||(9978-10112)
[»] scaffold0312 (1 HSPs)
scaffold0312 (133-208)||(5991-6068)
[»] scaffold0970 (1 HSPs)
scaffold0970 (285-326)||(3183-3224)
[»] scaffold0371 (2 HSPs)
scaffold0371 (279-336)||(7786-7843)
scaffold0371 (209-327)||(4658-4777)
[»] scaffold0020 (2 HSPs)
scaffold0020 (279-336)||(177317-177374)
scaffold0020 (300-336)||(174882-174918)
[»] scaffold0004 (2 HSPs)
scaffold0004 (209-339)||(382802-382935)
scaffold0004 (279-332)||(383497-383550)
[»] scaffold0413 (1 HSPs)
scaffold0413 (279-327)||(5164-5212)
[»] scaffold0160 (1 HSPs)
scaffold0160 (133-185)||(26269-26321)
[»] scaffold0069 (4 HSPs)
scaffold0069 (247-335)||(33869-33957)
scaffold0069 (209-335)||(40825-40954)
scaffold0069 (279-335)||(28621-28677)
scaffold0069 (279-335)||(32736-32792)
[»] scaffold0042 (1 HSPs)
scaffold0042 (279-339)||(52931-52989)
[»] scaffold0037 (1 HSPs)
scaffold0037 (209-312)||(99148-99252)
[»] scaffold0511 (1 HSPs)
scaffold0511 (209-310)||(691-794)
[»] scaffold0266 (1 HSPs)
scaffold0266 (229-327)||(22382-22481)
[»] scaffold0230 (1 HSPs)
scaffold0230 (133-208)||(26548-26623)
[»] scaffold0149 (1 HSPs)
scaffold0149 (209-327)||(28698-28817)
[»] scaffold0697 (1 HSPs)
scaffold0697 (208-327)||(486-607)
[»] scaffold0490 (1 HSPs)
scaffold0490 (247-336)||(4142-4232)
[»] scaffold1433 (1 HSPs)
scaffold1433 (250-310)||(250-311)
[»] scaffold0244 (2 HSPs)
scaffold0244 (250-327)||(20070-20147)
scaffold0244 (250-327)||(8952-9029)
[»] scaffold0169 (1 HSPs)
scaffold0169 (209-335)||(5303-5432)
[»] scaffold0247 (1 HSPs)
scaffold0247 (209-324)||(3943-4056)
[»] scaffold0164 (2 HSPs)
scaffold0164 (161-208)||(7216-7263)
scaffold0164 (161-208)||(15097-15144)
[»] scaffold0309 (1 HSPs)
scaffold0309 (247-336)||(5317-5407)
[»] scaffold0165 (1 HSPs)
scaffold0165 (267-336)||(17260-17329)
[»] scaffold0962 (1 HSPs)
scaffold0962 (279-324)||(2199-2244)
[»] scaffold0003 (1 HSPs)
scaffold0003 (279-324)||(147684-147729)
[»] scaffold1098 (1 HSPs)
scaffold1098 (279-335)||(1283-1338)
[»] scaffold0554 (1 HSPs)
scaffold0554 (250-286)||(670-706)
[»] scaffold0324 (1 HSPs)
scaffold0324 (250-310)||(7803-7863)
[»] scaffold0310 (1 HSPs)
scaffold0310 (250-306)||(7080-7136)
[»] scaffold0026 (1 HSPs)
scaffold0026 (279-335)||(24099-24154)


Alignment Details
Target: chr7 (Bit Score: 133; Significance: 4e-69; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 207 - 339
Target Start/End: Complemental strand, 9863284 - 9863152
Alignment:
Q  207 tctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9863284 tctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatag 9863185  T
Q  307 aataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||||    
T  9863184 aataaagtactatttattaaaatcaactttgat 9863152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 17506962 - 17506832
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17506962 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 17506863  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  17506862 taaagtactatttattaaaatcaactttgat 17506832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 17546252 - 17546382
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17546252 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 17546351  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  17546352 taaagtactatttattaaaatcaactttgat 17546382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 13734679 - 13734549
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13734679 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 13734580  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||| |||||||||||    
T  13734579 taaagtactatttattaaattcaactttgat 13734549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 41283005 - 41283135
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41283005 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 41283104  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||| ||||||||||||||||||||||||||    
T  41283105 taaaatactatttattaaaatcaactttgat 41283135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 210 - 339
Target Start/End: Complemental strand, 13396710 - 13396581
Alignment:
Q  210 gtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaat 309  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13396710 gtaacaccccgtttttccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaat 13396611  T
Q  310 aaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||||||||||||||    
T  13396610 aaagtactatttattaaaatcaactttgat 13396581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 1501554 - 1501424
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1501554 tgtaacaccccgttttcccaacaacataaatataaaattaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaattcataaatagaa 1501455  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  1501454 taaagtactatttattaaaatcaactttgat 1501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 38413990 - 38413859
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  38413990 ctgtaacaccccgttttcccaacatcataaatatcaaagtaaatcagagtttaacacctaacgggcatgctacactacttttcaaaaatacataaataga 38413891  T
Q  308 ataaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||||||||||||||||    
T  38413890 ataaagtactatttattaaaatcaactttgat 38413859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 336
Target Start/End: Complemental strand, 14266800 - 14266671
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaa-cgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||||||||||||  |||||||| |||||||||| | |||||||||||||  |||| || |||||||||||||||||| ||  ||||| | ||||||||    
T  14266800 tgtaacaccccgttaacccaacaatataaatataataataaatcagagtttgtcaccaaaacgggcatgctacactgctatttcaaaattcttaaataga 14266701  T
Q  308 ataaagtactatttattaaa-atcaacttt 336  Q
    ||||| ||||||||| |||| |||||||||    
T  14266700 ataaaatactatttaataaacatcaacttt 14266671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 16567486 - 16567561
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  16567486 caatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctc 16567561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 16598176 - 16598101
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  16598176 caatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctc 16598101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 46181132 - 46181207
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  46181132 caatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctc 46181207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 19804957 - 19805032
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||||   ||||||||||| ||||||||    
T  19804957 caatgggtagggtactacagtgcccgtcctcatacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 19805032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 207 - 339
Target Start/End: Original strand, 17065002 - 17065137
Alignment:
Q  207 tctgtaacaccccgttttcccaacaacataaatataaaagtaaat---cagagtttaacac-ctaacgggcatgctacactgcttttcaaaaatccataa 302  Q
    |||||||||||||||| |||||||||| ||||||| |||  ||||   ||||||| ||||  | ||||||||||  |||||||||||||||| | | |||    
T  17065002 tctgtaacaccccgttatcccaacaac-taaatattaaataaaataatcagagttcaacaaacaaacgggcatgtcacactgcttttcaaaatttcttaa 17065100  T
Q  303 atagaataaagtactatttattaaaatcaactttgat 339  Q
    || ||||||| |||||||||||||||||||| |||||    
T  17065101 atcgaataaaatactatttattaaaatcaaccttgat 17065137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 336
Target Start/End: Complemental strand, 14256591 - 14256462
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaa-cgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||||||||||||  ||||| || |||||||||| | ||||| |||||||  |||| || |||||||||||||||||| ||  ||||| | ||||||||    
T  14256591 tgtaacaccccgttaacccaataatataaatataataataaataagagtttgtcaccaaaacgggcatgctacactgctatttcaaaattcttaaataga 14256492  T
Q  308 ataaagtactatttattaaa-atcaacttt 336  Q
    ||||| ||||||||| |||| |||||||||    
T  14256491 ataaaatactatttaataaacatcaacttt 14256462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 46783007 - 46783068
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtaccc 194  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||| | ||||||    
T  46783007 caatggttagggtactacagtgcccgtccccatacccgcatttataaaaaatacacgtaccc 46783068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 5023385 - 5023333
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  5023385 caatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaata 5023333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 39414497 - 39414569
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtacc 205  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||||   ||||||||||| |||||    
T  39414497 caatggatagggtactacaatgcccgttcccatacccgcatttataaaaaatacccgtacccgtgcccgtacc 39414569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 27398499 - 27398574
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||||||||||||    |||||||||| ||||||||    
T  27398499 caatggatagggtactacaatgcccgtccccatacccgtatttataaaaaatacccatacccgtgcccgtaccctc 27398574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 35092907 - 35092856
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  35092907 aatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaata 35092856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 13773179 - 13773227
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||    
T  13773179 acactgcttttcaaaaatccataaatagaataaaatattatttattaaa 13773227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 10066454 - 10066379
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| || ||||||||||||| | |||| ||||||||||||||||||||||  |||||||||| | ||||||||    
T  10066454 caatgggtatggtactacagtgcgcgtccctatacccgcatttataaaaaatacctgtacccgtgtccgtaccctc 10066379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 15724744 - 15724858
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || ||||| || |||  ||||| |||||||||||| |||||||||||    
T  15724744 tgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaactaac-ggaatgtcacactacttttcaaaaattcataaatagaa 15724842  T
Q  309 taaagtactatttatt 324  Q
    | || | |||||||||    
T  15724843 tgaaatgctatttatt 15724858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 12202851 - 12202734
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||| ||| ||  |||  ||||||||||| | || ||||| |  |||  |||||||||||| ||||| | |||||||||    
T  12202851 tgtaacaccccgttttcccaacaacttaattaagaaataaaatcagagttaatcaactaacaga-atgtcacactgcttttcgaaaattcttaaatagaa 12202753  T
Q  309 taaagtactatttattaaa 327  Q
    |||| ||||||| ||||||    
T  12202752 taaaatactattaattaaa 12202734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 13407114 - 13407230
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgct-tttcaaaaatccataaatag 306  Q
    ||||||||||||||  ||||| ||||||||||||| | |||||||||||||| ||||  || |||  |||||||||||| |||||||| | |||||||||    
T  13407114 tgtaacaccccgttaacccaataacataaatataataataaatcagagtttatcaccaaaatgggtctgctacactgctatttcaaaatttcataaatag 13407213  T
Q  307 aataaagtactatttatt 324  Q
     ||||| | |||||||||    
T  13407214 -ataaaatgctatttatt 13407230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 336
Target Start/End: Complemental strand, 16669303 - 16669234
Alignment:
Q  267 aacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    ||||||||||  |||||||||||||||| |   ||||||||||||| | |||||||||||||||||||||    
T  16669303 aacgggcatgtcacactgcttttcaaaattttttaaatagaataaaattctatttattaaaatcaacttt 16669234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 336
Target Start/End: Complemental strand, 17643671 - 17643602
Alignment:
Q  267 aacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    ||||||||||  |||||||||||||||| |   ||||||||||||| | |||||||||||||||||||||    
T  17643671 aacgggcatgtcacactgcttttcaaaattttttaaatagaataaaattctatttattaaaatcaacttt 17643602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 15732500 - 15732460
Alignment:
Q  285 cttttcaaaaatccataaatagaataaagtactatttatta 325  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  15732500 cttttcaaaaatccataaatagaataaaatactatttatta 15732460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 10629205 - 10629158
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||||    
T  10629205 acactacttttcaaaaatccataaatagaataaaatattatttattaa 10629158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 10638900 - 10638853
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||||    
T  10638900 acactacttttcaaaaatccataaatagaataaaatattatttattaa 10638853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 17172414 - 17172339
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| |||  |||||||||||||| ||||| |||||||| |  ||||||| ||| ||||||||    
T  17172414 caatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 17172339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 19144983 - 19145069
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa-atcaacttt 336  Q
    ||||||||| |||| | ||||||||||| ||||| |||||||||| | | ||||||||||||| ||||||||| |||| |||||||||    
T  19144983 atcagagttcaacaac-aacgggcatgccacactacttttcaaaatttcttaaatagaataaaatactatttaataaacatcaacttt 19145069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 20744382 - 20744468
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa-atcaacttt 336  Q
    ||||||||| |||| | ||||||||||| ||||| |||||||||| | | ||||||||||||| ||||||||| |||| |||||||||    
T  20744382 atcagagttcaacaac-aacgggcatgccacactacttttcaaaatttcttaaatagaataaaatactatttaataaacatcaacttt 20744468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 21736233 - 21736116
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgct-tttcaaaaatccataaata 305  Q
    |||||||||||||||  ||||||| ||||||||||  | ||||||| |||||| ||||  ||||||| |||||||||||| ||||| || | ||||||||    
T  21736233 ctgtaacaccccgttaacccaacatcataaatatattaataaatcaaagtttatcaccaaaacgggcctgctacactgctatttcacaatttcataaata 21736134  T
Q  306 gaataaagtactatttatt 324  Q
    | ||||| | |||||||||    
T  21736133 g-ataaaatgctatttatt 21736116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 16074710 - 16074633
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||| |||| ||||||||||  |||||||||||||||| | | ||||||||||| |  |||||||| ||||    
T  16074710 atcagagtttatcaccaaacgggcatgtcacactgcttttcaaaatttcttaaatagaatataaaactatttaataaa 16074633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 23441673 - 23441738
Alignment:
Q  268 acgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaac 333  Q
    |||||||||  ||||||||||||||||||   ||||||||||| |  |||||||||||||||||||    
T  23441673 acgggcatgtcacactgcttttcaaaaatttttaaatagaatataaaactatttattaaaatcaac 23441738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 43224251 - 43224292
Alignment:
Q  141 agggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  43224251 agggtactacaatgcccatccccatacccgcatttttaaaaa 43224292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 48558869 - 48558804
Alignment:
Q  143 ggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||| ||| ||||||||||||||||||||| |||||||| |  ||||| ||||| ||||||||    
T  48558869 ggtactatagtacccatccccatacccgcatttgtaaaaaatgttagtacctgtgcccgtaccctc 48558804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 39996565 - 39996521
Alignment:
Q  280 cactgcttttcaaaaatccataaatagaataaagtactatttatt 324  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||    
T  39996565 cactgcttttcaaaaattcataaatagaataaaatgctatttatt 39996521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 3551721 - 3551658
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgta 203  Q
    |||||||||||||| ||| ||| |||||||| |||| |||||||||  ||||||| ||||||||    
T  3551721 tagggtactacagtacccttcctcatacccgtatttgtaaaaaatacctgtacccatgcctgta 3551658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 4912861 - 4912818
Alignment:
Q  140 tagggtactacagtgcccatcccc-atacccgcatttataaaaa 182  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  4912861 tagggtactacagtgcccttcccccatacccgcatttataaaaa 4912818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 15141599 - 15141682
Alignment:
Q  228 aacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgcttttcaaaaatccataaatagaata 310  Q
    ||||| |||||||||| | |||||||||||||| ||||  ||||| ||||  |||||||||||||||| | | |||||||||||    
T  15141599 aacaatataaatataataataaatcagagtttatcaccaaaacggacatgtcacactgcttttcaaaatttcttaaatagaata 15141682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 40789726 - 40789651
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||| ||||||||| || ||| ||||||||||||||| ||||| |||||||| | ||||||||  || ||||||||    
T  40789726 caatagatagggtattatagtacccatccccataccctcatttgtaaaaaatgtctgtacccgaacccgtaccctc 40789651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 44300632 - 44300707
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| ||| ||||||||||||  | ||||| |||||||| |  ||||||| ||| ||||||||    
T  44300632 caatggatagggtactatagtacccatccccataagctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 44300707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 3362874 - 3362924
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    ||||||||| |||||||||||| || || ||||||||| ||||||||||||    
T  3362874 caatggataaggtactacagtgtccgtctccatacccgtatttataaaaaa 3362924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 11308393 - 11308478
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| |||||  ||||||||||  ||||| |||||||||| | | ||||||||||||| ||||||||| | ||| ||||||    
T  11308393 aatcagagttaaacacg-aacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaattaaaacaactt 11308478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 11311701 - 11311786
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| |||||  ||||||||||  ||||| |||||||||| | | ||||||||||||| ||||||||| | ||| ||||||    
T  11311701 aatcagagttaaacacg-aacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaattaaaacaactt 11311786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 12684763 - 12684678
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| |||||  ||||||||||  ||||| |||||||||| | | ||||||||||||| ||||||||| | ||| ||||||    
T  12684763 aatcagagttaaacacg-aacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaattaaaacaactt 12684678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 42284425 - 42284495
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtac 204  Q
    ||||| |||||||||||| ||||||| |||||||| | |||| |||||| ||| ||||| |||||| ||||    
T  42284425 aatgggtagggtactacaatgcccattcccatacctgtatttttaaaaattatctgtactcgtgcccgtac 42284495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 43702590 - 43702548
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||    
T  43702590 tagggtactacaatgcccatccccatacccacatttgtaaaaa 43702548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 31454824 - 31454869
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||||||||| || || |||||||| ||||||||||||||||||    
T  31454824 tagggtactacaatgtccgtccccatatccgcatttataaaaaata 31454869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 33978734 - 33978819
Alignment:
Q  123 ttagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||| |||||||||| |||  | ||  |||||||||| |||  ||||||| |  ||||||||||| ||||||||    
T  33978734 ttagggatggcaatgggtagggtactatagtatcgatttccatacccgcgtttgcaaaaaatgtccgtacccgtgcccgtaccctc 33978819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 41783866 - 41783801
Alignment:
Q  267 aacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaa 332  Q
    ||||||||||  |||||||||||| ||| | | ||||||||||||| || |||||| |||||||||    
T  41783866 aacgggcatgtcacactgcttttcgaaatttcttaaatagaataaaatattatttaataaaatcaa 41783801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 34152529 - 34152477
Alignment:
Q  156 ccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||| ||| | |||||| | |||||||||| ||||||||||    
T  34152529 ccatccccatacccgcgtttgttaaaaatgtctgtacccgtgtctgtaccctc 34152477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 34174595 - 34174647
Alignment:
Q  156 ccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||| ||| | |||||| | |||||||||| ||||||||||    
T  34174595 ccatccccatacccgcgtttgttaaaaatgtctgtacccgtgtctgtaccctc 34174647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 26494771 - 26494902
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26494771 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 26494870  T
Q  308 ataaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||||||||||||||||    
T  26494871 ataaagtactatttattaaaatcaactttgat 26494902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 26362201 - 26362070
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26362201 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 26362102  T
Q  308 ataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||| |||||||||||    
T  26362101 ataaagtactatttattaaattcaactttgat 26362070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 27870611 - 27870480
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27870611 ctgtaccaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgttacactgcttttcaaaaatccataaataga 27870512  T
Q  308 ataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||| |||||||||||    
T  27870511 ataaagtactatttattaaattcaactttgat 27870480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 23670790 - 23670920
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23670790 tgtaacaccccgttttcccaacatcataaatatcaaagtaaatcagagtttaacacctaatgggcatgctacactgcttttcaaaaatccataaatagaa 23670889  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  23670890 taaagtactatttattaaaatcaactttgat 23670920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 14088182 - 14088257
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  14088182 caatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 14088257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 14087577 - 14087652
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||||| |||  ||||||||||| ||||||||    
T  14087577 caatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattatccgtacccgtgcccgtaccctc 14087652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 249 - 339
Target Start/End: Complemental strand, 17023640 - 17023551
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||| |||| | |||||| |||  |||||||||||||||| | | ||||||||||||||||||||||||| ||||||||||||||    
T  17023640 aatcagagttcaacaacaaacgggaatgtcacactgcttttcaaaatttcttaaatagaataaagtactatttatt-aaatcaactttgat 17023551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 15719376 - 15719301
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| |||||||| ||||||||||||||||||   ||||||||||| ||||||||    
T  15719376 caatgggtagggtactacaatgcccgtccccataaccgcatttataaaaaatacccgtacccgtgcccgtaccctc 15719301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 31149890 - 31149815
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||||| |||  |||| |||| ||||||||||    
T  31149890 caatgggtagggtactacactgcccatccccatacccgcatttttaaaaattatccgtactcgtgtctgtaccctc 31149815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 6225026 - 6224952
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||| ||   ||||||||||| ||||||||    
T  6225026 aatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattactcgtacccgtgcccgtaccctc 6224952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 41616504 - 41616572
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||   ||| ||||||| ||||||||    
T  41616504 tagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtatccgtgcccgtaccctc 41616572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 14645229 - 14645303
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| |||| ||||||||||||||||||||||   ||||||||||| ||||||||    
T  14645229 caatgggtagggtactacaatgcccgtccc-atacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 14645303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 21560263 - 21560146
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||||||||||| |||  |||| |||||| | |  | || ||  |||  |||||||||||||||||| |||||||||||    
T  21560263 tgtaacaccccgttaacccaacaacataaatattaaataaaataagagttaatccacaaaagga-atgtcacactgcttttcaaaaattcataaatagaa 21560165  T
Q  309 taaagtactatttattaaa 327  Q
    |||| ||||| ||||||||    
T  21560164 taaaatactagttattaaa 21560146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 21981811 - 21981694
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||| ||||  ||||||||| ||||||| |||  ||| ||||||| | || | |||||  |||  |||||||||||||||||| |||||||||||    
T  21981811 tgtaacacctcgttaacccaacaacgtaaatattaaataaaaccagagttaatcaacaaacgga-atgtcacactgcttttcaaaaattcataaatagaa 21981713  T
Q  309 taaagtactatttattaaa 327  Q
    |||| | ||||||||||||    
T  21981712 taaaatgctatttattaaa 21981694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 21636850 - 21636761
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    |||| ||||||| |||| | |||||| |||  |||||||||||||||| | | ||||||||||||| | |||| ||||||||||||||||    
T  21636850 taaaccagagttcaacaacaaacgggaatgtcacactgcttttcaaaatttcttaaatagaataaaatgctatatattaaaatcaacttt 21636761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 22632439 - 22632367
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtacc 205  Q
    |||||| |||||||||||| ||||||||||||||| ||||||| |||||| ||  |||| ||||||| |||||    
T  22632439 caatgggtagggtactacaatgcccatccccatactcgcatttgtaaaaattacctgtatccgtgcccgtacc 22632367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 6278009 - 6277958
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  6278009 caatggatagggtactatagtacccatccccataccctcatttgtaaaaaat 6277958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 38309688 - 38309738
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    ||||||||||||||||| ||| |||||| |||||||| |||||||||||||    
T  38309688 caatggatagggtactatagtacccatctccataccctcatttataaaaaa 38309738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 4902128 - 4902060
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||| ||| | ||||||||||||||| ||| |||||||| | |||||||||| | ||||||||    
T  4902128 tagggtactatagtactcatccccatacccgcgtttgtaaaaaatgtctgtacccgtgtccgtaccctc 4902060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 21999121 - 21999073
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||||||||| ||||||||||||||| |  |||||||||||    
T  21999121 acactgcttttcaaaaattcataaatagaataaaatgttatttattaaa 21999073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 4572188 - 4572231
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||    
T  4572188 tagggtacaacagtgcccgtccccatacctgcatttataaaaaa 4572231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 7977944 - 7978019
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||||||| |||||| |||||| |||||| ||   ||||||||| | ||||||||    
T  7977944 caatgggtagggtactacaatgcccatcctcatacctgcatttttaaaaattacccgtacccgtgtccgtaccctc 7978019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 15674165 - 15674098
Alignment:
Q  141 agggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||| ||| ||||||||||||||||| ||| |||||||||   ||||||| ||| ||||||||    
T  15674165 agggtactatagtacccatccccatacccgcgtttgtaaaaaatacccgtacccgggcccgtaccctc 15674098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 327
Target Start/End: Original strand, 26705656 - 26705774
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    |||||||||| |||| |||||||||| ||| ||  |||   |||||||||| | || |||||||  |||  |||||||||||||||||| | ||||||||    
T  26705656 ctgtaacacctcgttatcccaacaacgtaattaataaatataatcagagttaatcaactaacgga-atgtcacactgcttttcaaaaattcttaaataga 26705754  T
Q  308 ataaagtactatttattaaa 327  Q
     |||| | ||||||||||||    
T  26705755 gtaaaatgctatttattaaa 26705774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 327
Target Start/End: Original strand, 26975389 - 26975507
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    |||||||||| |||| |||||||||| ||| ||  |||   |||||||||| | || |||||||  |||  |||||||||||||||||| | ||||||||    
T  26975389 ctgtaacacctcgttatcccaacaacgtaattaataaatataatcagagttaatcaactaacgga-atgtcacactgcttttcaaaaattcttaaataga 26975487  T
Q  308 ataaagtactatttattaaa 327  Q
     |||| | ||||||||||||    
T  26975488 gtaaaatgctatttattaaa 26975507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 29455704 - 29455779
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||| | || |||||||||||||||||||| |||||| ||   ||||||||| | ||||||||    
T  29455704 caatgggtagggtactataatgtccatccccatacccgcatttttaaaaattacccgtacccgtgtccgtaccctc 29455779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 30774710 - 30774769
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    ||||||||||||||| |||||||||| |||  ||||||||||| |||| ||| |||||||    
T  30774710 tagggatggcaatgggtagggtactatagtatccatccccatatccgcgtttgtaaaaaa 30774769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 33347262 - 33347195
Alignment:
Q  141 agggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||| ||| |||||||||||| |||| ||| ||||||||||  ||||||| ||| ||||||||    
T  33347262 agggtactatagtacccatccccatatccgcgtttgtaaaaaatattcgtacccgggcccgtaccctc 33347195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 34718978 - 34718927
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| |||  |||||||||||||| ||||| ||||||||    
T  34718978 caatggatagggtactatagtatccatccccataccctcatttgtaaaaaat 34718927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 41692662 - 41692611
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| |||  |||||||||||||| ||||| ||||||||    
T  41692662 caatggatagggtactatagtatccatccccataccctcatttgtaaaaaat 41692611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 19254681 - 19254631
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    |||||||||||||||| |||  |||||||||||||| ||||| ||||||||    
T  19254681 aatggatagggtactatagtatccatccccataccctcatttgtaaaaaat 19254631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 25013060 - 25013137
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||||| | ||||||||||  ||||| |||||||||| | | ||||||||||| |  |||||||| ||||    
T  25013060 atcagagtttaacatcaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 25013137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 41983161 - 41983210
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    |||||| |||||||||||| ||||||||| ||||||| ||||| ||||||    
T  41983161 caatgggtagggtactacaatgcccatcctcataccctcatttgtaaaaa 41983210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 7774437 - 7774381
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    ||||||||| | |||| ||||||||||||||||| | |||||||| ||| |||||||    
T  7774437 atcagagttaagcaccaaacgggcatgctacactacatttcaaaattccttaaatag 7774381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 8953716 - 8953668
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||||||||| |||||| |||||||| |  |||||||||||    
T  8953716 acactgcttttcaaaaattcataaaaagaataaaatgatatttattaaa 8953668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 15023518 - 15023458
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    |||||||||||||||  ||||||||| | ||||| |||||||||| || ||| ||||||||    
T  15023518 tagggatggcaatgggcagggtactataatgcccgtccccataccggcgtttgtaaaaaat 15023458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 36470644 - 36470608
Alignment:
Q  133 caatggatagggtactacagtgcccatccccataccc 169  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  36470644 caatggatagggtactatagtgtccatccccataccc 36470608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 131; Significance: 7e-68; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 7971 - 8101
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7971 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 8070  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  8071 taaagtactatttattaaaatcaactttgat 8101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 7e-68; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 53223643 - 53223773
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53223643 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 53223742  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  53223743 taaagtactatttattaaaatcaactttgat 53223773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 13735835 - 13735777
Alignment:
Q  125 agggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  13735835 agggatggcaatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaa 13735777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 50481263 - 50481188
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||   ||||||||||| ||||||||    
T  50481263 caatgggtagggtactacagtgcccgtccccatccccgcatttataaaaaatacccgtacccgtgcccgtaccctc 50481188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 15012795 - 15012702
Alignment:
Q  247 taaatcagagtttaaca-cctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||| |||| || |||||| |||  |||||||||||||||| | | ||||||||||||| |||||||||||| |||||||||||||    
T  15012795 taaatcagagttcaacagccaaacgggaatgtcacactgcttttcaaaatttcttaaatagaataaaatactatttattagaatcaactttgat 15012702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 23299719 - 23299646
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccct 207  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||| |||  ||||||||||| |||||||    
T  23299719 aatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattatccgtacccgtgcccgtaccct 23299646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 24987606 - 24987531
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||||||||   || |||||||| ||||||||    
T  24987606 caatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtgcccgtgcccgtaccctc 24987531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 44792842 - 44792767
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||||||||   ||| ||||||| ||||||||    
T  44792842 caatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtatccgtgcccgtaccctc 44792767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 38695023 - 38694938
Alignment:
Q  123 ttagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||| |||||||||| ||| |||||||||||| |||||||| | ||||||   |||||||||| | ||||||||    
T  38695023 ttagggatggcaatgggtagggtactatagtacccatccccatatccgcatttgtgaaaaatgcctgtacccgtgtccgtaccctc 38694938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 39352375 - 39352424
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  39352375 aatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaa 39352424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 19872992 - 19873076
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||| |||||||||| | ||||||||  ||||||||||||| |||||| || || |||| ||||| ||||||||    
T  19872992 tagggatggcaatgggtagggtactataatgcccatcttcatacccgcatttgtaaaaattacatatacctgtgcccgtaccctc 19873076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 19618601 - 19618668
Alignment:
Q  141 agggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||| || || ||||||||||||||||||||||||||||  ||||||||||  ||||||||    
T  19618601 agggtactacattgtccgtccccatacccgcatttataaaaaatatccgtacccgtgctcgtaccctc 19618668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 45079405 - 45079330
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||| |||||||| |  ||||||| ||| ||||||||    
T  45079405 caatggatagggtactatagtacccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 45079330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 5041253 - 5041204
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    |||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  5041253 caatgggtagggtactacaatgcccatccccatacccgcatttttaaaaa 5041204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 21082028 - 21081939
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    |||||||||||| |||| | || ||| |||  |||||||||||||||| | | ||||||||||||| | |||| ||||||||||||||||    
T  21082028 taaatcagagttcaacaacaaatgggaatgtcacactgcttttcaaaatttcttaaatagaataaaatgctatatattaaaatcaacttt 21081939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 328
Target Start/End: Original strand, 9224 - 9344
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaat---cagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaata 305  Q
    |||||||||||||| |||||||||  ||||||| |||  ||||   ||||||| |||| | ||||||||||  |||||||||||||||| | | ||||||    
T  9224 tgtaacaccccgttatcccaacaat-taaatattaaataaaataatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttc-taaata 9321  T
Q  306 gaataaagtactatttattaaaa 328  Q
    ||||||| ||||||||| |||||    
T  9322 gaataaattactatttaataaaa 9344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 39961419 - 39961463
Alignment:
Q  141 agggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||    
T  39961419 agggtactatagtgcccatccccatacccgcgtttataaaaaata 39961463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 49359870 - 49359922
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||| |||||||||||| ||||  |||||||||||||||||||||||||||    
T  49359870 caatgggtagggtactacactgcctgtccccatacccgcatttataaaaaata 49359922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 10085460 - 10085385
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||||||||  ||||| |||||||||| ||| |||||||| | |||| |||||||  |||||||    
T  10085460 caatggatagggtactacagtatccatctccatacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctc 10085385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 10192380 - 10192305
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||||||||  ||||| |||||||||| ||| |||||||| | |||| |||||||  |||||||    
T  10192380 caatggatagggtactacagtatccatctccatacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctc 10192305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 11671743 - 11671782
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgca 172  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  11671743 caatggatagggtactacaatgcccatccccatacccgca 11671782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 30248253 - 30248202
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  30248253 caatggatagggtactatagtacccatccccataccctcatttgtaaaaaat 30248202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 41410457 - 41410382
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||| ||||| ||| ||||||||||||||| ||||| |||||||| | |||||||| | | ||||||||    
T  41410457 caatggataggatactatagtacccatccccataccctcatttgtaaaaaatgtctgtacccgagtccgtaccctc 41410382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 36692008 - 36692058
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    |||||| ||||||||||||||| || ||||||| |||||||||||||||||    
T  36692008 caatgggtagggtactacagtgtccttccccatgcccgcatttataaaaaa 36692058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 41923871 - 41923929
Alignment:
Q  127 ggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||||||||| |||||||||||| ||||| | |  ||||||||||||||||||||||    
T  41923871 ggatggcaatgggtagggtactacaatgcccgttcttatacccgcatttataaaaaata 41923929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 322
Target Start/End: Original strand, 42108438 - 42108553
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaa--atcagagtttaacacc-taacgggcatgctacactgcttttcaaaaatccataaat 304  Q
    ||||||||||| ||| |||||||||  ||||||| |||  ||  ||||||||||| ||||  || ||||||||||||||||||||| ||||| | |||||    
T  42108438 ctgtaacaccctgttatcccaacaa-ttaaatattaaataaaatatcagagtttatcaccaaaatgggcatgctacactgcttttc-aaaattcttaaat 42108535  T
Q  305 agaataaagtactattta 322  Q
    |||||||| |||||||||    
T  42108536 agaataaaatactattta 42108553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 12856703 - 12856646
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    |||||||||||||||| | | ||||||||||||| | |||| ||||||||||||||||    
T  12856703 acactgcttttcaaaatttcttaaatagaataaaatgctatatattaaaatcaacttt 12856646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 13037677 - 13037600
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||||||| ||||||||||  ||||| |||||||||| | | ||||||||||| |  |||||||| ||||    
T  13037677 atcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 13037600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 13044042 - 13043965
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||||||| ||||||||||  ||||| |||||||||| | | ||||||||||| |  |||||||| ||||    
T  13044042 atcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 13043965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 15231525 - 15231570
Alignment:
Q  282 ctgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||    
T  15231525 ctgcttttcaaaaattcataaatagaataaaatgctatttattaaa 15231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 15237393 - 15237438
Alignment:
Q  282 ctgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||    
T  15237393 ctgcttttcaaaaattcataaatagaataaaatgctatttattaaa 15237438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 25467394 - 25467443
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    |||||| |||||||||||| |||||||||||||| |||||||| ||||||    
T  25467394 caatgggtagggtactacaatgcccatccccatatccgcatttttaaaaa 25467443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 48079982 - 48080031
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    |||||| |||||||||||| ||||||||||||||||| ||||| ||||||    
T  48079982 caatgggtagggtactacaatgcccatccccatacccacatttgtaaaaa 48080031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 35984091 - 35984167
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||||||| | |||| |||||  |||||||||||||||| | | ||||||||||||| ||||||||| ||||    
T  35984091 aatcagagtttaacaac-aacgagcatgtcacactgcttttcaaaatttc-taaatagaataaaatactatttaataaa 35984167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 40563854 - 40563896
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    |||||||||||| | ||||||||||||||||||||| ||||||    
T  40563854 tagggtactacaatacccatccccatacccgcatttgtaaaaa 40563896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 54045872 - 54045918
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttatt 324  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||||    
T  54045872 tacactgcttttcaaaatttcttaaatagaataaaatactatttatt 54045918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 12273656 - 12273733
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||| || |||| ||| ||||||  |||||||||||||||||| | ||||||||||| |  |||||||| ||||    
T  12273656 atcagagtatatcaccaaactggcatgtcacactgcttttcaaaaattcttaaatagaatataaaactatttaataaa 12273733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 51055372 - 51055429
Alignment:
Q  138 gatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccg 195  Q
    |||||||||||||| ||||| || |||| || |||||| ||||||||| |||||||||    
T  51055372 gatagggtactacaatgcccttctccatgcctgcatttgtaaaaaatacatgtacccg 51055429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 15221709 - 15221757
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||| ||||| | ||||||||||||| | ||||||||||||    
T  15221709 acactgcttttcgaaaattcttaaatagaataaaatgctatttattaaa 15221757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 22845319 - 22845275
Alignment:
Q  141 agggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    ||||||||||| ||||| |||||||||||| |||| |||||||||    
T  22845319 agggtactacaatgcccttccccatacccgtatttgtaaaaaata 22845275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 46819068 - 46819120
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    ||||||||||||||||| | |||||||||||||| || ||||| ||| |||||    
T  46819068 caatggatagggtactataatgcccatccccatatccacatttgtaagaaata 46819120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 7e-68; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 21240352 - 21240222
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21240352 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 21240253  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  21240252 taaagtactatttattaaaatcaactttgat 21240222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 23340422 - 23340291
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23340422 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 23340323  T
Q  308 ataaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||||||||||||||||    
T  23340322 ataaagtactatttattaaaatcaactttgat 23340291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 37378395 - 37378526
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37378395 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 37378494  T
Q  308 ataaagtactatttattaaaatcaactttgat 339  Q
    ||||| ||||||||||||||||||||||||||    
T  37378495 ataaaatactatttattaaaatcaactttgat 37378526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 21242902 - 21242772
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21242902 tgtaacaccccgttttcccaacaatataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 21242803  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  21242802 taaagtactatttattaaaatcaactttgat 21242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 336
Target Start/End: Complemental strand, 21124733 - 21124604
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgct-tttcaaaaatccataaataga 307  Q
    ||||||||||||||  |||| ||| |||||||||| | |||||||||||||| |||| |||||||||||||||||||| |||||||| | | ||||||||    
T  21124733 tgtaacaccccgttaacccagcaatataaatataataataaatcagagtttatcaccaaacgggcatgctacactgctatttcaaaatttcttaaataga 21124634  T
Q  308 ataaagtactatttattaaa-atcaacttt 336  Q
    ||||| ||||||||| |||| |||||||||    
T  21124633 ataaaatactatttaataaacatcaacttt 21124604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 31502523 - 31502584
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31502523 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 31502584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 31505089 - 31505150
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31505089 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 31505150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 32422936 - 32422861
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  32422936 caatggatacggtactacaatgcccgtccccatacccgcatttataaaaaatattcgtacccgtgcccgtaccctc 32422861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 3329100 - 3329175
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||   |||||| |||| ||||||||    
T  3329100 caatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccatgcccgtaccctc 3329175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 25424663 - 25424738
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| || || ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  25424663 caatgggtagggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctc 25424738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 33867741 - 33867666
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| || || ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  33867741 caatgggtagggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctc 33867666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 23147915 - 23148047
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaag---taaatcagagtttaacacctaa-cgggcatgctacactgcttttcaaaaatccataaat 304  Q
    |||||||||||||| |||||||||| ||||||| |||    |||||||||||| |||| | || |||| |||  ||||| |||||||||| | | |||||    
T  23147915 tgtaacaccccgttatcccaacaac-taaatattaaataaataaatcagagttcaacaacaaaacgggaatgtcacactacttttcaaaatttcttaaat 23148013  T
Q  305 agaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||| ||||||||||||||    
T  23148014 agaataaagtactatttatt-aaatcaactttgat 23148047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 23559705 - 23559837
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaag---taaatcagagtttaacacctaa-cgggcatgctacactgcttttcaaaaatccataaat 304  Q
    |||||||||||||| |||||||||| ||||||| |||    |||||||||||| |||| | || |||| |||  ||||| |||||||||| | | |||||    
T  23559705 tgtaacaccccgttatcccaacaac-taaatattaaataaataaatcagagttcaacaacaaaacgggaatgtcacactacttttcaaaatttcttaaat 23559803  T
Q  305 agaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||| ||||||||||||||    
T  23559804 agaataaagtactatttatt-aaatcaactttgat 23559837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 10041020 - 10040973
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  10041020 acactgcttttcaaaaatccataaatagaataaaatactatttattaa 10040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 31440831 - 31440756
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| |||| ||||||||||||||||||||||   ||||||||||| ||||||||    
T  31440831 caatgggtagggtactacaatgcccgtcccaatacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 31440756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 38620301 - 38620376
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||||||||   |||||||||||  |||||||    
T  38620301 caatgggtagggtactacaatgcccatccccatacctgcatttataaaaaatacccgtacccgtgcccataccctc 38620376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 20354172 - 20354060
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    |||||||||| |||  ||||||||| ||||||| |||   |||||||||| | || | |||||  |||  ||||||||||||||||||||||||||||||    
T  20354172 tgtaacacccggttaacccaacaacgtaaatattaaatagaatcagagttaatcaacaaacgga-atgtcacactgcttttcaaaaatccataaatagaa 20354074  T
Q  309 taaagtactattta 322  Q
    |||| |||||||||    
T  20354073 taaaatactattta 20354060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 325
Target Start/End: Original strand, 23079225 - 23079341
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    |||||||||||||||  ||||||||| | ||||| |||  ||||||||||| | || | |||||  |||  ||||| |||| ||||||||||||||||||    
T  23079225 ctgtaacaccccgttaacccaacaacgtgaatattaaataaaatcagagttaatcaacaaacgga-atgtcacacttctttacaaaaatccataaataga 23079323  T
Q  308 ataaagtactatttatta 325  Q
    ||||| ||||||||||||    
T  23079324 ataaaatactatttatta 23079341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 325
Target Start/End: Original strand, 22108743 - 22108790
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttatta 325  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  22108743 tacactgcttttcaaaaatccataaatagattaaaatactatttatta 22108790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 312
Target Start/End: Original strand, 31517590 - 31517692
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||| |||||||||||||||| |||||||| |||  ||||||||||| | || | ||| || |||  |||||||||||||||||  |||||||||||    
T  31517590 tgtaacatcccgttttcccaacaatataaatattaaataaaatcagagttaatcaacaaac-ggaatgtcacactgcttttcaaaaaatcataaatagaa 31517688  T
Q  309 taaa 312  Q
    ||||    
T  31517689 taaa 31517692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 17629828 - 17629902
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctaca 281  Q
    |||||||||||||||  |||||||| |||||||||| | |||||||||||||| ||||  |||||||||||||||    
T  17629828 ctgtaacaccccgttaacccaacaatataaatataataataaatcagagtttatcaccaaaacgggcatgctaca 17629902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 24683397 - 24683311
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| ||||   ||||||||||  |||||||||||||||| | | ||||||||||| | |||||||||||||| |||||||    
T  24683397 aatcagagttcaacaaacaacgggcatgtcacactgcttttcaaaatttcttaaatagaatataatactatttattaaattcaactt 24683311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 20936958 - 20937031
Alignment:
Q  135 atggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||| |||||||||||||||||||||| |||||||| |||| |||||||||   |||||||||  |||||||||    
T  20936958 atgggtagggtactacagtgcccatcctcatacccgtatttgtaaaaaatacccgtacccgtgtttgtaccctc 20937031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 4480971 - 4481023
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||| || ||||||||| ||||| |||||||||||||||||||||||||||    
T  4480971 caatgggtaaggtactacaatgcccgtccccatacccgcatttataaaaaata 4481023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 6479235 - 6479187
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||||||    
T  6479235 acactacttttcaaaaatccataaatagaataaaatactattcattaaa 6479187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 9205094 - 9205151
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtg 197  Q
    ||||||||| |||||||| || ||||| ||||||||||||||||||  ||||||||||    
T  9205094 tagggtactgcagtgcccgtctccataaccgcatttataaaaaatacttgtacccgtg 9205151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 23084754 - 23084803
Alignment:
Q  279 acactgcttttcaaaa-atccataaatagaataaagtactatttattaaa 327  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  23084754 acacagcttttcaaaaaatccataaatagaataaaatactatttattaaa 23084803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 30241358 - 30241402
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  30241358 tagggtactacagtgcccgtccc-atacccgcatttataaaaaata 30241402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 23231646 - 23231698
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||| |||||||||||| ||||| |||||||||||  ||||||||||||||    
T  23231646 caatgggtagggtactacaatgcccgtccccatacccaaatttataaaaaata 23231698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 29546291 - 29546239
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    ||||||||||||||||| ||| ||||||||||||||| | ||| |||||||||    
T  29546291 caatggatagggtactatagtacccatccccatacccacgtttgtaaaaaata 29546239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 44070601 - 44070525
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataa-aaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||||||| ||  |||| |||||||||||| ||||||   ||||||||||| ||||||||    
T  44070601 caatgggtagggtactacagtgcccgtcttcatatccgcatttataaaaaaatacccgtacccgtgcccgtaccctc 44070525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 668166 - 668091
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||||||| ||||||| ||||| |||||| ||   ||||||||||| ||| ||||    
T  668166 caatgggtagggtactacaatgcccatcctcatacccacatttgtaaaaattactcgtacccgtgcccgtatcctc 668091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 4289549 - 4289624
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| |||  | |||||||||||| ||||| |||||||| |  ||||||| ||| ||||||||    
T  4289549 caatggatagggtactatagtatctatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 4289624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 40475442 - 40475383
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacc 193  Q
    |||||||||||||||| ||| ||| ||||||||||||| ||| |||||||| | ||||||    
T  40475442 aatggatagggtactatagtacccttccccatacccgcgtttgtaaaaaatgtctgtacc 40475383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 40507789 - 40507730
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacc 193  Q
    |||||||||||||||| ||| ||| ||||||||||||| ||| |||||||| | ||||||    
T  40507789 aatggatagggtactatagtacccttccccatacccgcgtttgtaaaaaatgtttgtacc 40507730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 24528020 - 24528098
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||| |||| | ||||||||||  |||||||||||||||| | | |||||||||  || ||||||||| ||||    
T  24528020 aatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttcttaaatagaaataaatactatttaataaa 24528098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 8027657 - 8027576
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgc-atttataaaaaatatatgtacccgtgcctgtac 204  Q
    ||||||||||||||| ||| |||||| |||  ||||||||||||||||  ||| |||||||| |  ||||||||||| ||||    
T  8027657 tagggatggcaatgggtagtgtactatagtatccatccccatacccgcgttttgtaaaaaatgtccgtacccgtgcccgtac 8027576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 4592388 - 4592340
Alignment:
Q  135 atggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    |||| |||||||||||||||||| ||| |||||| |||||| |||||||    
T  4592388 atgggtagggtactacagtgcccttcctcataccagcatttgtaaaaaa 4592340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 16711537 - 16711489
Alignment:
Q  135 atggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    |||| |||||||||||||||||| ||||| ||||||| ||| |||||||    
T  16711537 atgggtagggtactacagtgcccttccccctacccgcgtttgtaaaaaa 16711489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 327
Target Start/End: Original strand, 25650473 - 25650591
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaa-cacctaacgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    ||||||||||||| |  ||||||||| ||||||| |||  ||||||||||| || || ||||| || |||  ||||||| |||||||||| |||||||||    
T  25650473 ctgtaacaccccgataacccaacaacgtaaatattaaataaaatcagagttaaatcaactaac-ggaatgtcacactgc-tttcaaaaatacataaatag 25650570  T
Q  307 aataaagtactatttattaaa 327  Q
    |||  | | ||||||||||||    
T  25650571 aattgaatgctatttattaaa 25650591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 35048539 - 35048607
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||| |||  |||||||||||||||| ||| ||||||||    ||||||||||| ||||||||    
T  35048539 tagggtactatagtatccatccccatacccgcgtttgtaaaaaatgctcgtacccgtgcccgtaccctc 35048607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1885 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold1885
Description:

Target: scaffold1885; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 209 - 338
Target Start/End: Original strand, 1051 - 1180
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1051 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 1150  T
Q  309 taaagtactatttattaaaatcaactttga 338  Q
    ||||||||||||||||||||||||||||||    
T  1151 taaagtactatttattaaaatcaactttga 1180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 4e-66; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 33847772 - 33847903
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33847772 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 33847871  T
Q  308 ataaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||||||||||||||||    
T  33847872 ataaagtactatttattaaaatcaactttgat 33847903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 1103732 - 1103602
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1103732 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 1103633  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||| ||||||||||||    
T  1103632 taaagtactatttattaatatcaactttgat 1103602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 28384211 - 28384341
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28384211 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaatgggcatgctacactgcttttcaaaaatccataaatagaa 28384310  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  28384311 taaagtactatttattaaaatcaactttgat 28384341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 15722778 - 15722642
Alignment:
Q  203 accctctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataa 302  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  15722778 accccctgtaacaccctgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacacttcttttcaaaaattcataa 15722679  T
Q  303 atagaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||||||||    
T  15722678 atagaataaagtactatttattaaaatcaactttgat 15722642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 16279479 - 16279349
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16279479 tgtaacaccccgttttcccaaaaacataaatctaaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 16279380  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  16279379 taaagtactatttattaaaatcaactttgat 16279349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 207 - 339
Target Start/End: Complemental strand, 53388849 - 53388717
Alignment:
Q  207 tctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  53388849 tctgtaacatcccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacagacatgttacactgcttttcaaaaatccataaatag 53388750  T
Q  307 aataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||||    
T  53388749 aataaagtactatttattaaaatcaactttgat 53388717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 15281272 - 15281142
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  15281272 tgtaacaccccgttttcccaacaacataaatatgaaagtaaatcagagtttaacaccttatgggcatgctacactgcttttcaaaaatccataaatagaa 15281173  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||| |||||||||||    
T  15281172 taaagtactatttattaaattcaactttgat 15281142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 21075752 - 21075827
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  21075752 caatggatagggtactacagtgcccgtccccatacccgcatttataaaaaatacttgtacccgtgcccgtaccctc 21075827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 324
Target Start/End: Original strand, 18220484 - 18220585
Alignment:
Q  225 cccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgct-tttcaaaaatccataaatagaataaagtactattta 322  Q
    ||||||||||||||||||| | |||||||||||||| ||||  |||||||||||||||||||| |||||||| | ||||||||||||| | |||||||||    
T  18220484 cccaacaacataaatataataataaatcagagtttatcaccaaaacgggcatgctacactgctatttcaaaatttcataaatagaatagaatactattta 18220583  T
Q  323 tt 324  Q
    ||    
T  18220584 tt 18220585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 12185701 - 12185776
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  12185701 caatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 12185776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 12187693 - 12187768
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  12187693 caatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 12187768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 23147325 - 23147408
Alignment:
Q  122 attagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtacc 205  Q
    ||||||||||||||||| || | ||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||| |||||    
T  23147325 attagggatggcaatgggtaagatactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtacc 23147408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 29149204 - 29149129
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||| ||||| ||||||||    
T  29149204 caatggatagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtaccagtgcccgtaccctc 29149129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 42053456 - 42053381
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  42053456 caatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctc 42053381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 41790645 - 41790698
Alignment:
Q  286 ttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 339  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41790645 ttttcaaaattccataaatagaataaagtactatttattaaaatcaactttgat 41790698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 52595457 - 52595542
Alignment:
Q  123 ttagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||| || ||||||||| || || ||||||||||||||||||||||||||||  ||| ||||||| ||||||||    
T  52595457 ttagggatggcaatgggtacggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtatccgtgcccgtaccctc 52595542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 3387404 - 3387329
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  3387404 caatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 3387329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 14576714 - 14576789
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  14576714 caatgggtagggtattacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 14576789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 22313551 - 22313468
Alignment:
Q  125 agggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||||||||  ||||| ||  |||||||||||| ||||||||    
T  22313551 agggatggcaatgggtagggtactacaatgcccatccccatatccgcattttaaaaaattacctgtacccgtgcccgtaccctc 22313468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 32655710 - 32655635
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| || || ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  32655710 caatgggtagggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctc 32655635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 52180966 - 52180891
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| || || ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  52180966 caatgggtagggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctc 52180891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 8065887 - 8065960
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccc 206  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||   ||||||||||| ||||||    
T  8065887 caatgggtagggtactacagtgcccatccccatatctgcatttataaaaaatactcgtacccgtgcccgtaccc 8065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 13876992 - 13877041
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13876992 tacactgcttttcaaaaatccataaatagaataaaatactatttattaaa 13877041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 28234360 - 28234285
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| |||  |||||||||||||||||||| |||||||| |  ||||||||||| ||||||||    
T  28234360 caatggatagggtactatagtatccatccccatacccgcatttgtaaaaaatgtccgtacccgtgcccgtaccctc 28234285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 38000510 - 38000569
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    ||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||||    
T  38000510 tagggatggcaatgggtagggtactacagtgtccgtctccatacccgcatttataaaaaa 38000569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 42755263 - 42755338
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| ||||||||||| |||||||||||||||   ||||||||||| ||||||||    
T  42755263 caatgggtagggtactacactgcccgtccccataccctcatttataaaaaatacccgtacccgtgcccgtaccctc 42755338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 21245753 - 21245811
Alignment:
Q  125 agggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  21245753 agggatgacaatgggtagggtactacagtgtccatccccatacctgcatttataaaaaa 21245811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 52013718 - 52013781
Alignment:
Q  121 aattagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||| |||| ||| ||||||||    
T  52013718 aattagggatggcaatgggtagggtactatagtacccatccccatatccgcgtttgtaaaaaat 52013781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 4757073 - 4757123
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||||    
T  4757073 caatggatagggtactacagtgtccattctcatacccgcatttataaaaaa 4757123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 7250705 - 7250647
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  7250705 tagggatggcaatgggtagggtactacaatgctcatccacatacccgcatttgtaaaaa 7250647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 29856106 - 29856240
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaag----taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaa 303  Q
    ||||||||||||||| |||||||||| ||||||| |||     |||||||||||| ||||   |||||| |||  ||||| ||||| |||| | | ||||    
T  29856106 ctgtaacaccccgttatcccaacaac-taaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactactttttaaaatttcttaaa 29856204  T
Q  304 tagaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||   ||||||||||||||||||||||||    
T  29856205 tagaataaaacgctatttattaaaatcaactttgat 29856240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 3098104 - 3098055
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  3098104 aatggatagggtactacaatgcccgtccccatactcgcatttataaaaaa 3098055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 28916339 - 28916387
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  28916339 tacactgcttttcaaaaatccatagatagagtaaaatactatttattaa 28916387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 34459812 - 34459744
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||| | ||||||||| ||||||||||||| |||||| ||| |||| ||||||| ||||||||    
T  34459812 tagggtactataatgcccatcctcatacccgcatttttaaaaattatctgtatccgtgcccgtaccctc 34459744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 54932916 - 54932864
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||| |||||||| ||||||||| |||||||| ||||||||||||||||||    
T  54932916 caatgggtagggtacaacagtgcccgtccccatatccgcatttataaaaaata 54932864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 2721421 - 2721346
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||||||||  ||||| |||||||||| ||| |||||||| | |||| |||||||  |||||||    
T  2721421 caatggatagggtactacagtatccatctccatacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctc 2721346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 16372632 - 16372518
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||  ||||||| |||  ||||||||||| | || | |||||  ||| ||||||||| ||||||| | |||||||| ||    
T  16372632 tgtaacaccccgttaacccaacaaagtaaatattaaataaaatcagagttaatcaacaaacgga-atgttacactgctcttcaaaatttcataaataaaa 16372534  T
Q  309 taaagtactatttatt 324  Q
    |||| |||||||||||    
T  16372533 taaaatactatttatt 16372518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 22247794 - 22247845
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  22247794 caatggatagggtactatagtacccatccccataccctcatttgtaaaaaat 22247845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 29406061 - 29406010
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  29406061 caatggatagggtactatagtacccatccccataccctcatttgtaaaaaat 29406010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 45097484 - 45097535
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  45097484 caatggatagggtactatagtacccatccccataccctcatttgtaaaaaat 45097535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 53140533 - 53140608
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| |||  |||||||||||||| ||||| |||||||| |  ||||||| ||| ||||||||    
T  53140533 caatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 53140608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 2225146 - 2225073
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaatata--tgtacccgtgcctgtacc 205  Q
    ||||| |||||||||||||||||| ||| |||||||| |||||||||||| |||   ||||||||||| |||||    
T  2225146 aatgggtagggtactacagtgcccgtccacatacccgtatttataaaaaaaatacccgtacccgtgcccgtacc 2225073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 15243263 - 15243217
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttatt 324  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  15243263 tacactgctattcaaaaatccataaatagaataaaatacaatttatt 15243217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 26340435 - 26340369
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcc 199  Q
    |||||| |||||||||| |||  |||||||||||||||| ||| |||||||| | ||||||||||||    
T  26340435 caatgggtagggtactatagtatccatccccatacccgcgtttgtaaaaaatgtctgtacccgtgcc 26340369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 54979330 - 54979280
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    |||||| |||||||||||| ||||| |||||||||||| ||||||||||||    
T  54979330 caatgggtagggtactacaatgcccgtccccatacccgtatttataaaaaa 54979280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 2073800 - 2073751
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    ||||| ||||||||||||| ||| |||| |||||||||||||||||||||    
T  2073800 caatgaatagggtactacaatgctcatctccatacccgcatttataaaaa 2073751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 29994242 - 29994291
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    |||||| |||||||||||| ||||||||||||||||| ||||| ||||||    
T  29994242 caatgggtagggtactacaatgcccatccccatacccacatttgtaaaaa 29994291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 33983049 - 33983134
Alignment:
Q  123 ttagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||| | |||||||||||| |||||||| | ||| | |||||| |||||| ||  |||||||||| | ||||||||    
T  33983049 ttagggatggcaataggtagggtactacaatgcccatctctatatctgcatttttaaaaattacctgtacccgtgtccgtaccctc 33983134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 13880408 - 13880452
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactattta 322  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||    
T  13880408 tacactacttttcaaaaatccataaatagaataaaacactattta 13880452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 15417671 - 15417557
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    |||||||||||||||  |||||||||  || ||| |||  ||||||||||| |||| ||||| || |||| |||| ||||||||||| | || |||||||    
T  15417671 ctgtaacaccccgttaacccaacaacgcaattattaaatgaaatcagagttaaacaactaac-ggaatgccacaccgcttttcaaaattaca-aaataga 15417574  T
Q  308 ataaagtactatttatt 324  Q
    ||||| | |||||||||    
T  15417573 ataaaatgctatttatt 15417557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 16484035 - 16484095
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaata 310  Q
    |||||||||||||||| ||||||||||  ||||| |||||||||| | | |||||||||||    
T  16484035 atcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaata 16484095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 22829672 - 22829724
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||| |||||||||| ||| ||||||||||||||||| ||| |||||||||    
T  22829672 caatgggtagggtactatagtacccatccccatacccgcgtttgtaaaaaata 22829724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 25938294 - 25938362
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||| || || | |||||||||| |||||||||||||||  ||| ||||||||||| ||||    
T  25938294 tagggtactacaatgtccgttcccatacccgtatttataaaaaatatccgtatccgtgcctgtatcctc 25938362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 39804193 - 39804244
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    |||||| |||||||||| |||  |||||||||||||||||||| ||||||||    
T  39804193 caatgggtagggtactatagtatccatccccatacccgcatttgtaaaaaat 39804244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 46080640 - 46080691
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| ||| || |||||||||||| ||||| ||||||||    
T  46080640 caatggatagggtactatagtaccaatccccataccctcatttgtaaaaaat 46080691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 27026888 - 27026934
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttatt 324  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||||    
T  27026888 tacactgcttttcaaaatttcttaaatagaataaaatactatttatt 27026934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 652195 - 652239
Alignment:
Q  161 cccatacccgcatttataaaaaatatatgtacccgtgcctgtacc 205  Q
    |||||||||||||||||||||||||   ||||||||||| |||||    
T  652195 cccatacccgcatttataaaaaatacccgtacccgtgcccgtacc 652239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 46258163 - 46258111
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||| |||||||||| ||||||||||| ||||||| ||||| ||| |||||    
T  46258163 caatgggtagggtactatagtgcccatcctcatacccacatttgtaagaaata 46258111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 2289090 - 2288960
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2289090 tgtaataccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 2288991  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  2288990 taaagtactatttattaaaatcaactttgat 2288960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 22590935 - 22591065
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22590935 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 22591034  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  22591035 taaagtactatttattaaaatcaactttgat 22591065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 22586104 - 22586234
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  22586104 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaatatccataaatagaa 22586203  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  22586204 taaagtactatttattaaaatcaactttgat 22586234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 15687374 - 15687244
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15687374 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggtatgctacactgcttttcaaaaatccataaatagaa 15687275  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||| ||||| ||||||||||||||||||||    
T  15687274 taaaatactaattattaaaatcaactttgat 15687244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 8521805 - 8521936
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || | |||| ||||||||||||||||||||||||||||||    
T  8521805 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacatcttactgtcatgttacactgcttttcaaaaatccataaataga 8521904  T
Q  308 ataaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||||||||||||||||    
T  8521905 ataaagtactatttattaaaatcaactttgat 8521936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 25803823 - 25803897
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacact 283  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25803823 tgtaacaccccgttttcccaacatcataaatatcaaagtaaatcagagtttaacacctaacgggcatgctacact 25803897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 1638388 - 1638505
Alignment:
Q  207 tctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    ||||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || | |||||  |||  ||||| ||||||||||||||||||||||    
T  1638388 tctgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaacaaacgga-atgtcacacttcttttcaaaaatccataaatag 1638486  T
Q  307 aataaagtactatttatta 325  Q
    |||||| ||||||||||||    
T  1638487 aataaaatactatttatta 1638505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 33328508 - 33328582
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccct 207  Q
    ||||||||||||||||||| || || || ||||||||||||||||||||||||| |||||||||||| |||||||    
T  33328508 caatggatagggtactacaatgtccgtctccatacccgcatttataaaaaatatctgtacccgtgcccgtaccct 33328582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 35243914 - 35244044
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgct-tttcaaaaatccataaatag 306  Q
    ||||||||||||||  |||||||| |||||||||| | ||||||||||| || ||||  |||||||||||||||||||| || ||||| | | |||||||    
T  35243914 tgtaacaccccgttaacccaacaatataaatataataataaatcagagtgtatcaccaaaacgggcatgctacactgctattccaaaatttcttaaatag 35244013  T
Q  307 aataaagtactatttattaaa-atcaacttt 336  Q
    |||||| ||||||||| |||| |||||||||    
T  35244014 aataaaatactatttaataaacatcaacttt 35244044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 1641415 - 1641532
Alignment:
Q  207 tctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    ||||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || | ||| |  |||  ||||| ||||||||||||||||||||||    
T  1641415 tctgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaacaaacaga-atgtcacacttcttttcaaaaatccataaatag 1641513  T
Q  307 aataaagtactatttatta 325  Q
    |||||| ||||||||||||    
T  1641514 aataaaatactatttatta 1641532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 29264867 - 29264952
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| |||| | ||||||||||  |||||||||||||||| | | ||||||||||||| ||||||||||||||||||||||    
T  29264867 aatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaactt 29264952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 13534383 - 13534307
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataa-aaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||| | ||||||||    
T  13534383 caatgggtagggtactacaatgcccatccccatacccgcatttataaaaaaatacctgtacccgtgtccgtaccctc 13534307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 21475685 - 21475770
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| |||| | ||||||||||  |||||||||||||||| | | ||||||||||||| | ||||||||||||||||||||    
T  21475685 aatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttc-taaatagaataaaatgctatttattaaaatcaactt 21475770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 33331520 - 33331594
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccct 207  Q
    ||||||||||||||||||| || || || ||||||||||||||||||||||||   ||||||||||| |||||||    
T  33331520 caatggatagggtactacaatgtccgtctccatacccgcatttataaaaaatacccgtacccgtgcccgtaccct 33331594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 23622143 - 23622094
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  23622143 tacactgcttttcaaaaatccataaatagaataatatactatttattaaa 23622094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 31784161 - 31784088
Alignment:
Q  135 atggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||| |||||||||||| ||||| ||| ||||||||||||||||||||||| | |||| |||||| ||||||||    
T  31784161 atgggtagggtactacaatgcccgtcctcatacccgcatttataaaaaatacacgtacacgtgcccgtaccctc 31784088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 18136853 - 18136945
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||| ||||   |||||| |||  |||||||||||||||| | | ||||||||||||| | ||||| ||||||||||||||||||    
T  18136853 taaatcagagttcaacaataaacgggaatgtcacactgcttttcaaaatttcttaaatagaataaaatgctattcattaaaatcaactttgat 18136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 1329744 - 1329677
Alignment:
Q  141 agggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||| || |||||||||||||||||||||||||||   |||||||||||  |||||||    
T  1329744 agggtactacagtgtccgtccccatacccgcatttataaaaaatactcgtacccgtgcccttaccctc 1329677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 1591421 - 1591307
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || ||||| || |||  ||||| |||||||||||| |||||||||||    
T  1591421 tgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaactaac-ggaatgtcacactacttttcaaaaattcataaatagaa 1591323  T
Q  309 taaagtactatttatt 324  Q
    | || | |||||||||    
T  1591322 tgaaatgctatttatt 1591307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 17525673 - 17525786
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||| ||| ||| ||  |||||||||||| | || |||||||  |||  |||||||||||||||||| |||||||||||    
T  17525673 tgtaacaccccgttaacccaacaacgtaattattaat-taaatcagagttaatcaactaacgga-atgtcacactgcttttcaaaaattcataaatagaa 17525770  T
Q  309 taaagtactatttatt 324  Q
    |||| | |||||||||    
T  17525771 taaaatgctatttatt 17525786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 19445177 - 19445130
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  19445177 acactacttttcaaaaatccataaatagaataaaatactatttattaa 19445130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 20691779 - 20691704
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||||||| ||||  || |||||||||||||||||||  ||||||||| | ||||||||    
T  20691779 caatgggtagggtactacagtgcccgtccctctatccgcatttataaaaaatatccgtacccgtgtccgtaccctc 20691704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 16886474 - 16886343
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaag----taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaat 304  Q
    |||||||||||||| |||||||||  ||||||| |||     |||||||||||| ||||   |||||| |||  |||||||||||||||||| | |||||    
T  16886474 tgtaacaccccgttatcccaacaag-taaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactgcttttcaaaaattcttaaat 16886376  T
Q  305 agaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||| | |||||||||  |||||||||||||    
T  16886375 agaataaaatgctatttatt--aatcaactttgat 16886343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 21469084 - 21469169
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| |||| | ||||| ||||  |||||||||||||||| | | ||||||||||||| | ||||||||||||||||||||    
T  21469084 aatcagagttcaacaacaaacggacatgtcacactgcttttcaaaatttc-taaatagaataaaatgctatttattaaaatcaactt 21469169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 1583661 - 1583701
Alignment:
Q  285 cttttcaaaaatccataaatagaataaagtactatttatta 325  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  1583661 cttttcaaaaatccataaatagaataaaatactatttatta 1583701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 6337153 - 6337228
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||| ||||||||||||||||||| ||||| ||| ||||||   |||||||||  ||||||||    
T  6337153 caatgggtagggtactatagtgcccatccccatacccacatttgtaagaaatatccatacccgtgctcgtaccctc 6337228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 6937978 - 6938025
Alignment:
Q  135 atggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  6937978 atgggtagggtactacaatgcccatccccatacccgcatttgtaaaaa 6938025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 16134504 - 16134457
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  16134504 acactacttttcaaaaatccaaaaatagaataaaatactatttattaa 16134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 18316810 - 18316707
Alignment:
Q  209 tgtaacaccccgttttcccaa-caacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    ||||||||||||||  ||||| ||| |||||||||| | |||||||||||||| ||||  ||||||||||  ||||| |||||||||| | | |||||||    
T  18316810 tgtaacaccccgttaacccaaacaatataaatataataataaatcagagtttatcaccaaaacgggcatgtcacactacttttcaaaatttcttaaatag 18316711  T
Q  307 aata 310  Q
    ||||    
T  18316710 aata 18316707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 335
Target Start/End: Original strand, 22345926 - 22346052
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaat---cagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaata 305  Q
    |||||||||||||| |||||||||  ||||||| |||  ||||   ||||||| |||| | ||||||||||  ||||  |||||||||| | | ||||||    
T  22345926 tgtaacaccccgttatcccaacaat-taaatattaaataaaataatcagagttcaacaac-aacgggcatgtcacacaacttttcaaaatttc-taaata 22346022  T
Q  306 gaataaagtactatttattaaaatcaactt 335  Q
    ||||||| ||||||||||||||||||||||    
T  22346023 gaataaaatactatttattaaaatcaactt 22346052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 24447315 - 24447240
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| |||  |||||||||||||| ||||| |||||||| |  ||||||| ||| ||||||||    
T  24447315 caatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 24447240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 29641643 - 29641568
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| ||||||||||||| | || |||||||| ||||||||||||||||||    |||||||||| ||||||||    
T  29641643 caatgggtagggtactacagcgtccgtccccatatccgcatttataaaaaatacccatacccgtgcccgtaccctc 29641568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 1221904 - 1221830
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccct 207  Q
    ||||||||||||||||| |||  |||||||||||||| ||||| |||||||| |  ||||||| ||| |||||||    
T  1221904 caatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccct 1221830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 24440227 - 24440344
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||| |||||   |||  ||||||||||| | || | |||||  |||  ||||| |||||||||||| |||||||||||    
T  24440227 tgtaacaccccgttaacccaacaacgtaaatgataaataaaatcagagttaatcaacaaacgga-atgtcacactacttttcaaaaattcataaatagaa 24440325  T
Q  309 taaagtactatttattaaa 327  Q
    |||| | ||||||||||||    
T  24440326 taaaatgctatttattaaa 24440344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 25748899 - 25748983
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaac 333  Q
    |||||||||| |||| |  |||||||||  |||||||| ||  |||||   ||||||||||||| ||||||||||||||||||||    
T  25748899 aatcagagttcaacaacatacgggcatgtcacactgctatttcaaaatttttaaatagaataaaatactatttattaaaatcaac 25748983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 9062336 - 9062285
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| |||  |||||||||||||||| ||| ||||||||    
T  9062336 caatggatagggtactatagtatccatccccatacccgcgtttgtaaaaaat 9062285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 31511827 - 31511772
Alignment:
Q  128 gatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    ||||||||||| ||||||||||||| | |  |||||||| ||||||||||||||||    
T  31511827 gatggcaatgggtagggtactacagcgtctgtccccatatccgcatttataaaaaa 31511772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 21455617 - 21455572
Alignment:
Q  140 tagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||||||||| || || ||||||||||||||||| |||||||||    
T  21455617 tagggtactacaatgtccttccccatacccgcatttgtaaaaaata 21455572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 22799263 - 22799186
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||| ||| ||||||||||  ||||| |||||||||| | | ||||||||||| |  |||||||| ||||    
T  22799263 atcagagtttaataccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 22799186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 23104613 - 23104690
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||||| | ||||| ||||  ||||| |||||||||| | ||||||||||||| |  |||||||| ||||    
T  23104613 atcagagtttaacatcaaacggacatgtcacactacttttcaaaatttcataaatagaatataaaactatttaataaa 23104690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 25749133 - 25749193
Alignment:
Q  267 aacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||  ||||| |||||||||| | | ||||||||||||| ||||||||| ||||    
T  25749133 aacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaataaa 25749193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 21107889 - 21108019
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21107889 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacataacgggcatgctacactgcttttcaaaaatccataaatagaa 21107988  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  21107989 taaagtactatttattaaaatcaactttgat 21108019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 37357508 - 37357638
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37357508 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 37357607  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||| |||||||||||    
T  37357608 taaagtactatttattaaattcaactttgat 37357638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 295471 - 295601
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  295471 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacagctgacgggcatgctacactgcttttcaaaaatccataaatagaa 295570  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  295571 taaagtactatttattaaaatcaactttgat 295601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 42069313 - 42069238
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  42069313 caatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 42069238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 25815522 - 25815447
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||  |||||||    
T  25815522 caatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccataccctc 25815447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 29054801 - 29054737
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtg 197  Q
    |||||||||||||||| || |||||||| ||||||| |||||||||||||||| |||||||||||    
T  29054801 caatggatagggtactgcattgcccatctccatacctgcatttataaaaaatacatgtacccgtg 29054737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 13312645 - 13312720
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||||||||   ||| ||||||| ||||||||    
T  13312645 caatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtatccgtgcccgtaccctc 13312720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 945383 - 945441
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||    
T  945383 tagggatggcaatgggtagggtactacaatgcccatccccatacccgtatttttaaaaa 945441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 2978331 - 2978405
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccct 207  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||||| ||   ||||||||| |||||||||    
T  2978331 caatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattacccgtacccgtgtctgtaccct 2978405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 18822790 - 18822907
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || | ||| |  |||  |||||||||||||||||| |||||||||||    
T  18822790 tgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaacaaacaga-atgtcacactgcttttcaaaaattcataaatagaa 18822888  T
Q  309 taaagtactatttattaaa 327  Q
    |||| | ||||||||||||    
T  18822889 taaaatgctatttattaaa 18822907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 336
Target Start/End: Complemental strand, 21987792 - 21987666
Alignment:
Q  212 aacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgcttttcaaaaatccataaatagaata 310  Q
    |||||||||||  |||||||| |||||||||| | |||||||||||||| ||||  ||||| ||||||||||| || ||  | ||| | |||||||||||    
T  21987792 aacaccccgttaacccaacaatataaatataataataaatcagagtttatcaccaaaacggacatgctacacttctatttcataattcttaaatagaata 21987693  T
Q  311 aagtactatttattaaa-atcaacttt 336  Q
    || ||||||||| |||| |||||||||    
T  21987692 aaatactatttaataaacatcaacttt 21987666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 27783417 - 27783502
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttat-aaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||| |||| ||||||| ||||| ||||||| ||||||||||| ||||||||   ||||||||||| ||||||||    
T  27783417 tagggatggcaatgggtaggatactacactgcccgtccccatccccgcatttataaaaaaatacccgtacccgtgcccgtaccctc 27783502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 7842479 - 7842551
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtacc 205  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||| || | |||| |||||| |||||    
T  7842479 caatggatagggtactacaatgcccatccccatacccgcatctgtaaaaattacacgtactcgtgcccgtacc 7842551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 9222155 - 9222219
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtg 197  Q
    |||||| |||||||||||| ||||| |||||||||||||||||| |||||||||  |||||||||    
T  9222155 caatgggtagggtactacaatgcccgtccccatacccgcatttacaaaaaatatccgtacccgtg 9222219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 35978704 - 35978652
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||||||||    
T  35978704 caatgggtagggtactacagtgcccgtccccatacccacatttataaaaaata 35978652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 48964569 - 48964517
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||    
T  48964569 caatgggtagggtactacagtgcctgtccccatacccgcatttataaaaaata 48964517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 13529743 - 13529696
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  13529743 acactacttttcaaaaatccataaatagaataaaatactatttattaa 13529696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 28220880 - 28220955
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||||| ||   ||| ||||||| ||||||||    
T  28220880 caatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattacccgtatccgtgcccgtaccctc 28220955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 424481 - 424558
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatata--tgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||||| ||||| |||||||  |||||||||||||||| |||   ||||||||||| ||||||||    
T  424481 caatggatagggtactacaatgcccttccccatgtccgcatttataaaaaaaatacccgtacccgtgcccgtaccctc 424558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 21118847 - 21118801
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttatt 324  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||    
T  21118847 tacattgcttttcaaaaatccataaatagaataaaatactatttatt 21118801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 18251411 - 18251460
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  18251411 tacactgcttttcaaaaatccataaatagaataaaatatcatttattaaa 18251460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 18269423 - 18269472
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  18269423 tacactgcttttcaaaaatccataaatagaataaaatatcatttattaaa 18269472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 18274101 - 18274150
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  18274101 tacactgcttttcaaaaatccataaatagaataaaatatcatttattaaa 18274150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 21260929 - 21260881
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  21260929 aatgggtagggtactacaatgcccatccccatacccgcatttttaaaaa 21260881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 4893488 - 4893413
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| |||  |||||||||||||| ||||| |||||||| |  ||||||| ||| ||||||||    
T  4893488 caatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 4893413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 19996871 - 19996796
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| |||||||||||||| |||||||| |||||| ||   ||||| ||||| ||||||||    
T  19996871 caatgggtagggtactacaatgcccatccccatatccgcatttgtaaaaattactcgtacctgtgcccgtaccctc 19996796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 21738102 - 21738039
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaata 310  Q
    ||||||||||||||||||| ||||||||||  ||||| |||||||||| | | |||||||||||    
T  21738102 taaatcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaata 21738039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 336
Target Start/End: Complemental strand, 21746502 - 21746415
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa-atcaacttt 336  Q
    ||||||||||| |||| ||||||||||  ||||| |||||||||| | | ||||||||||||| |||| |||| |||| |||||||||    
T  21746502 atcagagtttatcaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactttttaataaacatcaacttt 21746415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 29184999 - 29185074
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| |||  |||||||||||||| ||||| |||||||| |  ||||||| ||| ||||||||    
T  29184999 caatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 29185074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 33363091 - 33363016
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| |||  |||||||||||||| ||||| |||||||| |  ||||||| ||| ||||||||    
T  33363091 caatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgttcgtacccgagcccgtaccctc 33363016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 236276 - 236334
Alignment:
Q  135 atggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacc 193  Q
    ||||||||||||||||| ||||| ||  ||||||||||||| |||||||||| ||||||    
T  236276 atggatagggtactacaatgcccttcatcatacccgcatttgtaaaaaatatctgtacc 236334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 327
Target Start/End: Complemental strand, 21529650 - 21529529
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacac--ctaacgggcatgctacactgcttttcaaaaatccataaata 305  Q
    ||||||||||||||| |||||||||| ||| ||| |||   |||||||||||||  |  | ||  || |||  |||||||| ||||||||||| ||||||    
T  21529650 ctgtaacaccccgttatcccaacaacgtaattattaaatataatcagagtttaaatctacaaaacggaatgtcacactgctattcaaaaatccttaaata 21529551  T
Q  306 gaataaagtactatttattaaa 327  Q
    |||||||||  |||||||||||    
T  21529550 gaataaagtgttatttattaaa 21529529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 38491322 - 38491380
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    ||||||||||||||| |||||||||||| || |||||| ||| ||||||||| ||||||    
T  38491322 tagggatggcaatgggtagggtactacaatgtccatcctcattcccgcatttgtaaaaa 38491380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 16398180 - 16398063
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    |||||||||||||||| | ||||  | || ||  ||| |||||||||||| |||| | |||||| |||  ||||| |||||| ||||| | |||||||||    
T  16398180 tgtaacaccccgtttttcgaacataaaaattaataaaataaatcagagttcaacaacaaacgggaatgtcacactacttttctaaaattcttaaatagaa 16398081  T
Q  309 taaagtactatttattaa 326  Q
    |||| | |||||||||||    
T  16398080 taaaatgctatttattaa 16398063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 326
Target Start/End: Original strand, 16399887 - 16400004
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||| |||||  | || ||  ||| |||||||| ||| |||| | |||||| |||  ||||| |||||| ||||| | |||||||||    
T  16399887 tgtaacaccccgttttctcaacataaaaattaataaaataaatcagcgttcaacaacaaacgggaatgtcacactacttttctaaaattcttaaatagaa 16399986  T
Q  309 taaagtactatttattaa 326  Q
    |||| | |||||||||||    
T  16399987 taaaatgctatttattaa 16400004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 47662178 - 47662262
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||| |||||||||| |||||| |||  |||||||||||||| | ||| ||||||||    ||||||||||| ||||||||    
T  47662178 tagggatgacaatggatagtgtactatagtatccatccccatacccacgtttgtaaaaaatgctcgtacccgtgcccgtaccctc 47662262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 20414880 - 20414931
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaat 184  Q
    ||||||||||||||||| | | ||||||||||||||| ||||| ||||||||    
T  20414880 caatggatagggtactataatacccatccccataccctcatttgtaaaaaat 20414931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 43634834 - 43634759
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||| ||||||||| |||| || || || ||||||||||||||||||||||||   | ||| ||||||||||||||    
T  43634834 caattgatagggtattacaatgtccgtctccatacccgcatttataaaaaatacccgcacctgtgcctgtaccctc 43634759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 2501487 - 2501537
Alignment:
Q  135 atggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    |||| |||||||||||||||||| ||||||||| ||| ||| |||||||||    
T  2501487 atgggtagggtactacagtgcccttccccatacacgcgtttgtaaaaaata 2501537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 11810515 - 11810430
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| ||| || ||||||||||  ||||| |||||||||| | | ||||||||||||| ||||||||| | ||| ||||||    
T  11810515 aatcagagttaaac-ccgaacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaattaaaacaactt 11810430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 12560756 - 12560714
Alignment:
Q  143 ggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||    
T  12560756 ggtactatagtgcccgtccctatacccgcatttataaaaaata 12560714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 20087283 - 20087162
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaata--taaaagtaaatcagagtttaacacctaa-cgggcatgctacactgcttttcaaaaatccataaata 305  Q
    |||||||||||||| ||||||  |  ||||||  ||| | |||||||||||||| |||| || ||||||||  |||||||||||||||| | | ||||||    
T  20087283 tgtaacaccccgttatcccaaacaattaaataaataataataaatcagagtttatcaccaaaacgggcatgtcacactgcttttcaaaatttcttaaata 20087184  T
Q  306 gaataaagtactatttattaaa 327  Q
    ||||| |  |||||||| ||||    
T  20087183 gaatataaaactatttaataaa 20087162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 44328120 - 44328070
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaa 183  Q
    |||||| ||| ||||||||||| || |||||||||||| ||||||||||||    
T  44328120 caatgggtagagtactacagtgaccgtccccatacccgtatttataaaaaa 44328070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 41311574 - 41311633
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaata 310  Q
    |||||||||||||||| |||||||||   ||||| |||||||||| | |||||||||||||    
T  41311574 atcagagtttaacacc-aacgggcatatcacactacttttcaaaatttcataaatagaata 41311633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 135073 - 134943
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  135073 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 134974  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||  |||||||||||    
T  134973 taaagtactatttattaatttcaactttgat 134943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 143781 - 143651
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  143781 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 143682  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    ||||||||||||||||||  |||||||||||    
T  143681 taaagtactatttattaatttcaactttgat 143651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 9e-61; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 17794278 - 17794408
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17794278 tgtaacaccccgttttcccaacatcataaatatcaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaattcataaatagaa 17794377  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||||||||||||||||||    
T  17794378 taaagtactatttattaaaatcaactttgat 17794408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 24803802 - 24803901
Alignment:
Q  18 atatgtcctgaaataataaattacctccgagcgaatcacgacccccaaacatgcatggttggtggagaccactcttactttcaacttctcatgtatttag 117  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24803802 atatgtcatgaaataataaattaccttcgagagaatcacgacccccaaacatgcatggttggtggagaccactcttactttcaacttctcatgtatttag 24803901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 22435465 - 22435348
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    |||||||||||||| ||||||||||||||||||  ||  ||||||||||| |||| | ||||   |||  |||||||||||||||||| |||||||||||    
T  22435465 tgtaacaccccgttatcccaacaacataaatatttaataaaatcagagttaaacaacaaacgaa-atgtcacactgcttttcaaaaattcataaatagaa 22435367  T
Q  309 taaagtactatttattaaa 327  Q
    |||| ||||||||||||||    
T  22435366 taaaatactatttattaaa 22435348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 3617060 - 3616985
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  3617060 caatgggtagggtactatagtgcccgtccccatacccgcatttataaaaaatactcgtacccgtgcccgtaccctc 3616985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 33087497 - 33087615
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||| ||||  |||||||| |||||||||| | |||||||||||||| |||| |||||| |||  | ||| |||||||||| | | |||||||||    
T  33087497 tgtaacacctcgttaacccaacaatataaatataataataaatcagagtttatcaccaaacgggaatgtcatactacttttcaaaatttcttaaatagaa 33087596  T
Q  309 taaagtactatttattaaa 327  Q
    |||| ||||||||| ||||    
T  33087597 taaaatactatttaataaa 33087615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 22522692 - 22522559
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatata----aaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaat 304  Q
    |||||||||||||| |||||||| | |||||||     ||| |||||||||||| |||| | |||||| |||  |||||||||||||||| | | |||||    
T  22522692 tgtaacaccccgttatcccaacagc-taaatattcaataaaataaatcagagttcaacaacaaacgggaatgtcacactgcttttcaaaatttcttaaat 22522594  T
Q  305 agaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||| |  |||||||||||||||||||||||    
T  22522593 agaataaaatgttatttattaaaatcaactttgat 22522559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 15005603 - 15005555
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15005603 tacactgcttttcaaaaatccataaatagaataaaatactatttattaa 15005555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 2621165 - 2621107
Alignment:
Q  124 tagggatggcaatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||    
T  2621165 tagggatggcaatgggtagggtactacaatgcccattcccatacccgcatttttaaaaa 2621107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 20384477 - 20384594
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||||||||||| |||  |||| |||||| | || | |||||  |||  ||||||||||||||| || |||||||||||    
T  20384477 tgtaacaccccgttaacccaacaacataaatattaaataaaataagagttaatcaacaaacgga-atgtcacactgcttttcaaacattcataaatagaa 20384575  T
Q  309 taaagtactatttattaaa 327  Q
    |||| | ||||||||||||    
T  20384576 taaaatgctatttattaaa 20384594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 21414299 - 21414253
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttatt 324  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  21414299 tacactgcttttcaaaaatccataaatagaataaaatactatttatt 21414253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 25625513 - 25625423
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa-atcaacttt 336  Q
    ||||||||||||||||||| ||||||||||  ||||| |||||||||| | | ||||||||||| | ||||||||| |||| |||||||||    
T  25625513 taaatcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataatactatttaataaacatcaacttt 25625423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 24789426 - 24789497
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtacc 205  Q
    ||||| |||||||||||| ||||| ||| |||||||||||||||||||||||   ||||||||||| |||||    
T  24789426 aatgggtagggtactacaatgcccgtcctcatacccgcatttataaaaaatacccgtacccgtgcccgtacc 24789497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 37226968 - 37226893
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||||| ||| ||||||||||||||||| ||||||||    ||||||| ||||||||||||    
T  37226968 caatgggtagggtactacagtacccttccccatacccgcatttgtaaaaaatgcccgtacccgagcctgtaccctc 37226893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 1667182 - 1667230
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  1667182 aatgggtagggtactacaatgcccatccccatacccgcatttattaaaa 1667230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 2472476 - 2472401
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||||| |||||||| |||||||||||||| |||||| |||   || ||||||| ||||||||    
T  2472476 caatgggtagggtactacaatgcccatctccatacccgcatttgtaaaaattatccatatccgtgcccgtaccctc 2472401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 32948955 - 32949010
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaac 333  Q
    ||||||| ||||||||| | | ||||||||||||| ||||||||||||||||||||    
T  32948955 tacactgtttttcaaaatttcttaaatagaataaaatactatttattaaaatcaac 32949010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 17273546 - 17273429
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||| ||  ||||||||| ||||||| ||   ||||||||||| | || | |||||  |||  |||||||||||||||||| |||||||||||    
T  17273546 tgtaacaccccattaacccaacaacgtaaatattaagtaaaatcagagttaatcaacaaacgga-atgtcacactgcttttcaaaaattcataaatagaa 17273448  T
Q  309 taaagtactatttattaaa 327  Q
    |||| |  |||||||||||    
T  17273447 taaaatcatatttattaaa 17273429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 21838868 - 21838998
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaata-taaaagtaaatcagagtttaacacctaa-cgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    |||||||||||||| ||||||  |  |||||| ||||  ||||| |||||||| |||| || |||||||||||||||||| ||  ||||| | |||||||    
T  21838868 tgtaacaccccgttatcccaaacaattaaataataaatataaataagagtttatcaccaaaacgggcatgctacactgctatttcaaaattcttaaatag 21838967  T
Q  307 aataaagtactatttattaaa-atcaacttt 336  Q
    |||| | ||||||||| |||| |||||||||    
T  21838968 aatataatactatttaataaacatcaacttt 21838998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 15266479 - 15266611
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaag----taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaat 304  Q
    |||||||||||||| |||||||| | ||||||| |||     |||||||||||| ||||   |||||| |||  ||||| | |||||||| ||  |||||    
T  15266479 tgtaacaccccgttatcccaacatc-taaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactacatttcaaaattct-taaat 15266576  T
Q  305 agaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||| | ||||||||||||||||||||||||    
T  15266577 agaataaaatgctatttattaaaatcaactttgat 15266611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 1376098 - 1376170
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtacc 205  Q
    |||||| |||| ||||||||||||  |||| ||||| ||||||||||||||||   ||||||||||| |||||    
T  1376098 caatgggtaggatactacagtgccggtccctatacctgcatttataaaaaatactcgtacccgtgcccgtacc 1376170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 7579970 - 7580045
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| |||||||||| ||| ||||||||||||||||  ||| ||||||||    ||||||||||| ||||||||    
T  7579970 caatgggtagggtactatagtacccatccccatacccgtgtttgtaaaaaatggccgtacccgtgcccgtaccctc 7580045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 20216120 - 20216195
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| ||| ||||||||||||  | ||||| |||||||| |  ||||||| ||| ||||||||    
T  20216120 caatggatagggtactatagtacccatccccataagctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 20216195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 20235718 - 20235793
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| ||| ||||||||||||  | ||||| |||||||| |  ||||||| ||| ||||||||    
T  20235718 caatggatagggtactatagtacccatccccataagctcatttgtaaaaaatgtccgtacccgagcccgtaccctc 20235793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 328
Target Start/End: Complemental strand, 20021197 - 20021074
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaat---cagagtttaacacctaa-cgggcatgctacactgcttttcaaaaatccataaa 303  Q
    ||||||||||||||| |||||||||  ||||||| |||  ||||   ||||||| ||||  ||| ||||||||  |||||||||||||||| |   ||||    
T  20021197 ctgtaacaccccgttatcccaacaat-taaatatcaaataaaataatcagagttcaacaaataaacgggcatgtcacactgcttttcaaaactttctaaa 20021099  T
Q  304 tagaataaagtactatttattaaaa 328  Q
    ||||||||| ||||||||| |||||    
T  20021098 tagaataaattactatttaataaaa 20021074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 24891613 - 24891564
Alignment:
Q  134 aatggatagggtactacag-tgcccatccccatacccgcatttataaaaa 182  Q
    ||||| ||||||||||||  ||||||||||||||||||||||| ||||||    
T  24891613 aatgggtagggtactacaaatgcccatccccatacccgcatttgtaaaaa 24891564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 39362881 - 39362953
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactattta 322  Q
    |||||||||| |||||  ||||||||||  ||||| |||||||||| | | ||||||||||||| |||||||||    
T  39362881 aatcagagttaaacacg-aacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactattta 39362953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 6109536 - 6109584
Alignment:
Q  134 aatggatagggtactacagtgcccatccccatacccgcatttataaaaa 182  Q
    |||| ||||||||||||| || ||||||||||||| |||||||| ||||    
T  6109536 aatgcatagggtactacaatgtccatccccatacctgcatttattaaaa 6109584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 38019969 - 38020013
Alignment:
Q  141 agggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    ||||||||| ||| ||||||||||||||||| ||| |||||||||    
T  38019969 agggtactatagtacccatccccatacccgcgtttgtaaaaaata 38020013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 43806 - 43936
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | ||| |||||||||||||||||||||||||||||||||||    
T  43806 tgtaacaccccgttttcccaacaacataaatataaaattaaatcagagtttaacatcttatgggtatgctacactgcttttcaaaaatccataaatagaa 43905  T
Q  309 taaagtactatttattaaaatcaactttgat 339  Q
    |||||||||| ||||||||||||||||||||    
T  43906 taaagtactacttattaaaatcaactttgat 43936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 336
Target Start/End: Complemental strand, 125767 - 125638
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||||||||||||  |||||||| |||||||||| | |||||||||||||| ||||  ||||| ||||||||||| || ||  ||||| | ||||||||    
T  125767 tgtaacaccccgttaacccaacaatataaatataataataaatcagagtttatcaccaaaacggacatgctacactactatttcaaaattcttaaataga 125668  T
Q  308 ataaagtactatttattaaa-atcaacttt 336  Q
    ||||| ||||||||| |||| |||||||||    
T  125667 ataaaatactatttaataaacatcaacttt 125638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 12098 - 12178
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||| |  |||||||| ||||    
T  12098 taaatcagagtttaacaccaaacgggcatgctacactgcttttcaaaatttcttaaatagaatataaaactatttaataaa 12178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 240661 - 240586
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  240661 caatgggtagggtattacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctc 240586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 953 - 836
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || | |||||  |||  |||||||||||||||||| |||||||||||    
T  953 tgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaacaaacgga-atgtcacactgcttttcaaaaattcataaatagaa 855  T
Q  309 taaagtactatttattaaa 327  Q
    |||| | ||||||||||||    
T  854 taaaatgctatttattaaa 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 13221 - 13271
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaat 329  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13221 acactgcttttcaaaaatccataaatagaataaaatactatttattaaaat 13271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 11216 - 11266
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaat 329  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11216 acactgcttttcaaaaatccataaatagaataaaatactatttattaaaat 11266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 336
Target Start/End: Original strand, 4634 - 4703
Alignment:
Q  267 aacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    ||||||||||  |||||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  4634 aacgggcatgtcacactgcttttcaaaatttcttaaatagaataaaatactatttattaaaatcaacttt 4703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 8884 - 8932
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8884 tacactgcttttcaaaaatccataaatagaataaaatactatttattaa 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 335
Target Start/End: Original strand, 7910 - 8038
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaat---cagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaat 304  Q
    ||||||||||||||| |||||||||  ||||||| |||  ||||   ||| ||| |||| | ||||||||||  |||||||||||||||| | | |||||    
T  7910 ctgtaacaccccgttatcccaacaat-taaatattaaataaaataatcagggttcaacaacaaacgggcatgtcacactgcttttcaaaatttc-taaat 8007  T
Q  305 agaataaagtactatttattaaaatcaactt 335  Q
    |||||||| ||||||||||||||||||||||    
T  8008 agaataaaatactatttattaaaatcaactt 8038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 822 - 737
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| |||| | ||||||||||  |||||  ||||||||| | | ||||||||||||| ||||||||||||||||||||||    
T  822 aatcagagttcaacaac-aacgggcatgtcacactttttttcaaaatttcttaaatagaataaaatactatttattaaaatcaactt 737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 982 - 890
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||| |||| | |||||| ||   |||||||||||||||| | | ||||||||||||| | ||||||||||||||||||||||||    
T  982 taaatcagagttcaacaacaaacgggaatatcacactgcttttcaaaatttcttaaatagaataaaatgctatttattaaaatcaactttgat 890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 279 - 326
Target Start/End: Original strand, 6050 - 6097
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  6050 acactgcttttcaaaaatccataaatagaataaaatactatttattaa 6097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 20155 - 20242
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    |||||||||| |||| | |||||||||   |||||||||||||||| | | ||||||||||||| ||||||||||| |||||||||||    
T  20155 aatcagagttcaacaacaaacgggcatatcacactgcttttcaaaatttcttaaatagaataaaatactatttatttaaatcaacttt 20242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 30822 - 30909
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    |||||||||| |||| | || ||||||   ||||| |||||||||| | ||||||||||||||| ||||||||||| |||||||||||    
T  30822 aatcagagttcaacaacaaatgggcatatcacactacttttcaaaatttcataaatagaataaaatactatttatttaaatcaacttt 30909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 93496 - 93409
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    |||||||||| |||| | ||||| |||| ||||||||||||||||| | | |||||||| |||| ||||||||| |||||||||||||    
T  93496 aatcagagttcaacaacaaacggacatgttacactgcttttcaaaatttcttaaatagagtaaaatactatttaataaaatcaacttt 93409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 1562 - 1496
Alignment:
Q  267 aacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaac 333  Q
    ||||||||||  |||||||||||||||| | | ||||||||||||| ||||||||||||||||||||    
T  1562 aacgggcatgtcacactgcttttcaaaatttcttaaatagaataaaatactatttattaaaatcaac 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 3300 - 3215
Alignment:
Q  249 aatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||| |||| | || |||||||  |||||||||||||||| | | ||||||||||||| ||||||||||||||||||||||    
T  3300 aatcagagttcaacaac-aatgggcatgtcacactgcttttcaaaacttcttaaatagaataaaatactatttattaaaatcaactt 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 336
Target Start/End: Complemental strand, 43748 - 43618
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgct-tttcaaaaatccataaatag 306  Q
    ||||||||||||||  |||||||| |||||||||| | |||||||||||||| ||||  |||| ||| ||||||||||| |||||||| | | ||||||     
T  43748 tgtaacaccccgttaacccaacaatataaatataataataaatcagagtttatcaccaaaacgagcaagctacactgctatttcaaaatttcttaaataa 43649  T
Q  307 aataaagtactatttattaaa-atcaacttt 336  Q
    |||||| || |||||| |||| |||||||||    
T  43648 aataaaatattatttaataaacatcaacttt 43618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 54208 - 54116
Alignment:
Q  247 taaatcagagtttaacacctaacggg-catgctacactgct-tttcaaaaatccataaatagaataaagtactatttattaaa-atcaacttt 336  Q
    |||||||||||||| |||| ||  || |||||||||||||| ||| |||| | | ||||||||||||| ||||||||| |||| |||||||||    
T  54208 taaatcagagtttatcaccaaaatggacatgctacactgctattttaaaatttcttaaatagaataaaatactatttaataaacatcaacttt 54116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 157909 - 157955
Alignment:
Q  278 tacactgcttttcaaaaatccataaatagaataaagtactatttatt 324  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  157909 tacactgcttttcaaaaatccataaatagaataaaatactatttatt 157955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 336
Target Start/End: Original strand, 2278 - 2408
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaat---cagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaat 304  Q
    ||||||||||||||| |||||||||  ||||||| |||  ||||   ||||||| |||| | |||| | |||  |||||||||||||||| |   |||||    
T  2278 ctgtaacaccccgttatcccaacaat-taaatattaaataaaataatcagagttcaacaacaaacgagaatgtcacactgcttttcaaaatttattaaat 2376  T
Q  305 agaataaagtactatttattaaaatcaacttt 336  Q
    |||||||| |||||||||||||||||||||||    
T  2377 agaataaaatactatttattaaaatcaacttt 2408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 119385 - 119485
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgct-tttcaaaaatccataaatag 306  Q
    ||||||||||||||  ||||||||||||||||||  | |||||||| ||||| ||||  ||||||| |||||||||||| |||||||| | |||||||||    
T  119385 tgtaacaccccgttaacccaacaacataaatatattaataaatcagtgtttatcaccaaaacgggcctgctacactgctatttcaaaatttcataaatag 119484  T
Q  307 a 307  Q
    |    
T  119485 a 119485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 198658 - 198544
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    |||||||||||||||  ||||||||| |||  || |||  ||||||||||| |||| || ||||  |||  |||||||||||||||||| ||| ||||||    
T  198658 ctgtaacaccccgttaacccaacaacgtaataattaaatgaaatcagagttaaacaacttacgga-atgtcacactgcttttcaaaaattcat-aataga 198561  T
Q  308 ataaagtactatttatt 324  Q
    ||||| | |||||||||    
T  198560 ataaaatgctatttatt 198544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 3219 - 3129
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa-atcaacttt 336  Q
    ||||||||||||||||||| ||||||||||  ||||| ||| |||||| ||| |||||||||||   ||||||||| |||| |||||||||    
T  3219 taaatcagagtttaacaccaaacgggcatgtcacactacttctcaaaattccttaaatagaatatgatactatttaataaacatcaacttt 3129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 10112 - 9978
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaata-taaa-agtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaata 305  Q
    ||||||||||||||| ||||||  |  |||||| |||| | ||||||||||||||||||| ||||||||||  || || || ||||||| | | ||||||    
T  10112 ctgtaacaccccgttatcccaaacaattaaataataaataataaatcagagtttaacaccaaacgggcatgtcactctactattcaaaatttcttaaata 10013  T
Q  306 gaataaagtactatttattaaa-atcaactttgat 339  Q
    ||||| | ||||||||| |||| ||||||||||||    
T  10012 gaatataatactatttaataaacatcaactttgat 9978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 6068 - 5991
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatata--tgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||||| ||||| |||||||  |||||||||||||||| |||   ||||||||||| ||||||||    
T  6068 caatggatagggtactacaatgcccttccccatgtccgcatttataaaaaaaatacccgtacccgtgcccgtaccctc 5991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 326
Target Start/End: Original strand, 3183 - 3224
Alignment:
Q  285 cttttcaaaaatccataaatagaataaagtactatttattaa 326  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  3183 cttttcaaaaatccataaatagaataaaatactatttattaa 3224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 7843 - 7786
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    |||||||||||||||| | | ||||||||||||| ||| |||||||||||||||||||    
T  7843 acactgcttttcaaaatttcttaaatagaataaaatacaatttattaaaatcaacttt 7786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 4658 - 4777
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaa-tccataaataga 307  Q
    ||||||||||||||  ||||||||| ||| ||| |||  ||||||||||  | || | ||  || |||  ||||||||||||||||| | ||||||||||    
T  4658 tgtaacaccccgttaacccaacaacgtaattattaaataaaatcagagtaaatcaacaaaacggaatgtcacactgcttttcaaaaaattcataaataga 4757  T
Q  308 ataaagtactatttattaaa 327  Q
    ||||| ||||||||||||||    
T  4758 ataaaatactatttattaaa 4777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 177317 - 177374
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 336  Q
    ||||| |||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  177317 acactacttttcaaaatttcttaaatagaataaaatactatttattaaaatcaacttt 177374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 336
Target Start/End: Original strand, 174882 - 174918
Alignment:
Q  300 taaatagaataaagtactatttattaaaatcaacttt 336  Q
    ||||||||||||| |||||||||||||||||||||||    
T  174882 taaatagaataaaatactatttattaaaatcaacttt 174918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 382802 - 382935
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaag----taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaat 304  Q
    |||||||||||||| |||||||| | ||||||| |||     |||||||||||| ||||   |||||| |||  ||||| |||||||||| | | |||||    
T  382802 tgtaacaccccgttatcccaacatc-taaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactacttttcaaaatttcttaaat 382900  T
Q  305 agaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||| | |||||||||||||||||| |||||    
T  382901 agaataaaatgctatttattaaaatcaaccttgat 382935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 383497 - 383550
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaa 332  Q
    |||||||||||||||| | | ||||||||||||| || ||||||| ||||||||    
T  383497 acactgcttttcaaaatttcttaaatagaataaaatattatttatcaaaatcaa 383550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 5164 - 5212
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  5164 acactacttttcaaaaacccataaatagaataaaatactatttattaaa 5212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 26321 - 26269
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaata 185  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||| |||||||||    
T  26321 caatggatagggtactatagtacccatccccatacccgcgtttgtaaaaaata 26269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 33869 - 33957
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||||| |||| | |||||  |||  |||||||||||||||| | | | ||||||||||| | ||||||||||||||||||||    
T  33869 taaatcagagttcaacaacaaacggaaatgtcacactgcttttcaaaatttcttgaatagaataaaatgctatttattaaaatcaactt 33957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 335
Target Start/End: Original strand, 40825 - 40954
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatata----aaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaat 304  Q
    |||||||||||||| |||||||| | |||||||     ||| |||||||||||| |||| | |||| | |||  ||||| |||||||||| | | | |||    
T  40825 tgtaacaccccgttatcccaacagc-taaatattcaataaaataaatcagagttcaacaacaaacgagaatgtcacacttcttttcaaaatttcttgaat 40923  T
Q  305 agaataaagtactatttattaaaatcaactt 335  Q
    |||||||| | ||||||||||||||||||||    
T  40924 agaataaaatgctatttattaaaatcaactt 40954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 28621 - 28677
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||||||||| |   | ||||||||||| | ||||||||||||||||||||    
T  28621 acactgcttttcaaaattttttgaatagaataaaatgctatttattaaaatcaactt 28677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 32736 - 32792
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||||||||| |   | ||||||||||| | ||||||||||||||||||||    
T  32736 acactgcttttcaaaattttttgaatagaataaaatgctatttattaaaatcaactt 32792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 52931 - 52989
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgat 339  Q
    |||||||||||||||| | | ||||||||||||||||||||||||| ||||||||||||||    
T  52931 acactgcttttcaaaattgc-taaatagaataaagtactatttatt-aaatcaactttgat 52989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 99252 - 99148
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgcttttcaaaaatccataaataga 307  Q
    ||||||| ||||||  |||||||| |||||||||| | |||||||||||||||||||  ||||| |||| ||||||||| ||  |||||   ||||||||    
T  99252 tgtaacatcccgttaacccaacaatataaatataataataaatcagagtttaacaccaaaacggacatgttacactgctattttaaaatttttaaataga 99153  T
Q  308 ataaa 312  Q
    |||||    
T  99152 ataaa 99148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 794 - 691
Alignment:
Q  209 tgtaacaccccgttttcccaa-caacataaatataaaagtaaatcagagtttaacacc-taacgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    ||||||||||||||  ||||| ||| |||||||||| | |||||||||||||| ||||  ||||||||||  ||||| |||||||||| | | |||||||    
T  794 tgtaacaccccgttaacccaaacaatataaatataataataaatcagagtttatcaccaaaacgggcatgtcacactacttttcaaaatttcttaaatag 695  T
Q  307 aata 310  Q
    ||||    
T  694 aata 691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 327
Target Start/End: Original strand, 22382 - 22481
Alignment:
Q  229 acaacataaatataaaagtaaatcagagtttaacacctaa-cgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    ||||| ||||||||| | |||||||||||||| |||| || ||||| |||||| ||||  ||||||| | | ||||||||||||| ||||||||| ||||    
T  22382 acaacttaaatataataataaatcagagtttatcaccaaaacgggcttgctacgctgcaattcaaaatttcttaaatagaataaaatactatttaataaa 22481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 26548 - 26623
Alignment:
Q  133 caatggatagggtactacagtgcccatccccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    ||||||||||||||||| |||  ||||||||||| || ||||| |||||||| | |||||||| ||| ||||||||    
T  26548 caatggatagggtactatagtatccatccccatatcctcatttgtaaaaaatgtctgtacccgagcccgtaccctc 26623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 28817 - 28698
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaa-tccataaataga 307  Q
    ||||||||||||||  ||||||||| ||| ||| |||  ||||||||||  | || | ||  || |||  ||||||||||||||||| | ||||||||||    
T  28817 tgtaacaccccgttaacccaacaacgtaattattaaataaaatcagagtaaatcaacaaaacggaatgtcacactgcttttcaaaaaattcataaataga 28718  T
Q  308 ataaagtactatttattaaa 327  Q
    ||||| ||||||||||||||    
T  28717 ataaaatactatttattaaa 28698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 327
Target Start/End: Complemental strand, 607 - 486
Alignment:
Q  208 ctgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacac--ctaacgggcatgctacactgcttttcaaaaatccataaata 305  Q
    ||||||||||||||| |||||||||| ||| ||| |||   |||||||||||||  |  | ||  || |||  |||||||| ||||||||||| ||||||    
T  607 ctgtaacaccccgttatcccaacaacgtaattattaaatataatcagagtttaaatctacaaaacggaatgtcacactgctattcaaaaatccttaaata 508  T
Q  306 gaataaagtactatttattaaa 327  Q
    |||||||||  |||||||||||    
T  507 gaataaagtgttatttattaaa 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 336
Target Start/End: Original strand, 4142 - 4232
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa-atcaacttt 336  Q
    |||||||||||||| |||| ||||||||||  |||||||| ||  ||||| | ||||||||||| | ||||||||| |||| |||||||||    
T  4142 taaatcagagtttatcaccaaacgggcatgtcacactgctatttcaaaattcttaaatagaatataatactatttaataaacatcaacttt 4232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 311 - 250
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgct-tttcaaaaatccataaatagaata 310  Q
    ||||||||| |||||| ||||||||||||||||||||  ||||||||| | |||||||||||    
T  311 atcagagttaaacaccaaacgggcatgctacactgctaattcaaaaattcttaaatagaata 250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 20070 - 20147
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||||||| ||||||||||  ||||| |||||||||| | | ||||||||||| |  |||||||| ||||    
T  20070 atcagagtttaacacccaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 20147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 8952 - 9029
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa 327  Q
    |||||||||||||||| ||||||||||  |||||  ||||||||| | | ||||||||||| |  |||||||| ||||    
T  8952 atcagagtttaacacccaacgggcatgtcacactaattttcaaaatttcttaaatagaatataaaactatttaataaa 9029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 335
Target Start/End: Original strand, 5303 - 5432
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaata-taaaagtaaatcagagtttaacacctaa-cgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    |||||||||||||| ||||||  |  |||||| ||||  |||||||||||||| |||| || |||||||||||||||||| ||  ||||| | ||||| |    
T  5303 tgtaacaccccgttatcccaaacaattaaataataaatataaatcagagtttatcaccaaaacgggcatgctacactgctatttcaaaattcttaaatgg 5402  T
Q  307 aataaagtactatttattaaa-atcaactt 335  Q
    |||| | ||||||||| |||| ||||||||    
T  5403 aatataatactatttaataaacatcaactt 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 4056 - 3943
Alignment:
Q  209 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 308  Q
    ||||||||||||||  ||||||||||||| ||| || | ||||||||||| | || ||||| || |||  ||||| |||||||||| | |||||| ||||    
T  4056 tgtaacaccccgttaacccaacaacataattattaatg-aaatcagagttaatcaactaac-ggaatgtcacactacttttcaaaatttcataaaaagaa 3959  T
Q  309 taaagtactatttatt 324  Q
    |||| | |||||||||    
T  3958 taaaatgctatttatt 3943  T

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Target: scaffold0164 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 7263 - 7216
Alignment:
Q  161 cccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||||||||||||  | |||||||||| ||||||||    
T  7263 cccatacccgcatttataaaaaatacctatacccgtgcccgtaccctc 7216  T

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Target: scaffold0164; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 15144 - 15097
Alignment:
Q  161 cccatacccgcatttataaaaaatatatgtacccgtgcctgtaccctc 208  Q
    |||||||||||||||||||||||||  | |||||||||| ||||||||    
T  15144 cccatacccgcatttataaaaaatacctatacccgtgcccgtaccctc 15097  T

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Target: scaffold0309 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 336
Target Start/End: Original strand, 5317 - 5407
Alignment:
Q  247 taaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttattaaa-atcaacttt 336  Q
    |||||||||||||| |||| ||||| ||||  |||||||| ||  ||||| | ||||||||||| | ||||||||| |||| |||||||||    
T  5317 taaatcagagtttatcaccaaacggacatgtcacactgctatttcaaaattcttaaatagaatataatactatttaataaacatcaacttt 5407  T

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Target: scaffold0165 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 336
Target Start/End: Original strand, 17260 - 17329
Alignment:
Q  267 aacgggcatgctacactgcttttcaaaaatccataaatagaataaagtactatttatt-aaaatcaacttt 336  Q
    ||||||||||  ||||| |||||||||| | | ||||||||||||| ||||||||||| ||||||||||||    
T  17260 aacgggcatgtcacacttcttttcaaaatttc-taaatagaataaaatactatttattaaaaatcaacttt 17329  T

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Target: scaffold0962 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 2244 - 2199
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttatt 324  Q
    ||||||||||||| |||  ||||||||||||||| |||||||||||    
T  2244 acactgcttttcataaaatcataaatagaataaaatactatttatt 2199  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Original strand, 147684 - 147729
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttatt 324  Q
    ||||||||||||| |||  ||||||||||||||| |||||||||||    
T  147684 acactgcttttcataaaatcataaatagaataaaatactatttatt 147729  T

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Target: scaffold1098 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 1283 - 1338
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||||||||  ||  ||||||||||||| ||||||||| ||||||||||||    
T  1283 acactgcttttcaaatttct-taaatagaataaaatactatttaataaaatcaactt 1338  T

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Target: scaffold0554 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 706 - 670
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgct 286  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  706 atcagagttaaacaccaaacgggcatgctacactgct 670  T

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Target: scaffold0324 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 7863 - 7803
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaata 310  Q
    |||||||| || |||| ||||||||||  |||||||||||||||| | | |||||||||||    
T  7863 atcagagtatatcaccaaacgggcatgtcacactgcttttcaaaatttcttaaatagaata 7803  T

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Target: scaffold0310 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 7080 - 7136
Alignment:
Q  250 atcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatag 306  Q
    ||||||||| | |||| ||||||||||||||||| | |||||||| ||| |||||||    
T  7080 atcagagttaagcaccaaacgggcatgctacactacatttcaaaattccttaaatag 7136  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 24099 - 24154
Alignment:
Q  279 acactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactt 335  Q
    |||||||||||||||  ||  ||||||||||||| ||||||||| ||||||||||||    
T  24099 acactgcttttcaaatttct-taaatagaataaaatactatttaataaaatcaactt 24154  T

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