View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14177_high_44 (Length: 320)
Name: NF14177_high_44
Description: NF14177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14177_high_44 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 22 - 253
Target Start/End: Complemental strand, 42657818 - 42657581
Alignment:
| Q |
22 |
ttttatttttattttggttctaatcgtccttgaatcc---------------tgatggatttcaattgagatgttggtgaacttgtccttaagctttgat |
106 |
Q |
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| T |
42657818 |
ttttatttttattttggttctaatcgtccttgaatcccatccatacagtgagtgatggatttcaattgagatgttggtgaacttgtccttaagctttgat |
42657719 |
T |
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| Q |
107 |
ttctagtttgggttatcttttgctatttgttatgattgatacccaatatttttctgctatttaaggatgatcgaattttaatgatcaatgacaaatttta |
206 |
Q |
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| T |
42657718 |
ttctagtttgggttatcttttgctatttgttatgattgatacccaatatttttctgctatttaaggatgatcgaattttaatgatcaatgacaaatttta |
42657619 |
T |
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| Q |
207 |
ttattgttcgtactactcattcatactctagatctgtgttgtgtttt |
253 |
Q |
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| T |
42657618 |
ttattgt---------tcattcatactctagatctgtgttgtgtttt |
42657581 |
T |
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