View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14177_high_7 (Length: 614)

Name: NF14177_high_7
Description: NF14177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14177_high_7
NF14177_high_7
[»] chr5 (35 HSPs)
chr5 (14-189)||(3522450-3522625)
chr5 (479-610)||(3521413-3521544)
chr5 (205-300)||(20502141-20502236)
chr5 (405-479)||(3521574-3521648)
chr5 (208-300)||(33247294-33247386)
chr5 (208-300)||(38978796-38978888)
chr5 (208-300)||(29451947-29452038)
chr5 (208-300)||(5355605-5355697)
chr5 (208-300)||(7537075-7537167)
chr5 (208-300)||(32455143-32455233)
chr5 (208-300)||(29002744-29002836)
chr5 (208-300)||(29874319-29874411)
chr5 (68-178)||(26449072-26449190)
chr5 (216-300)||(9630245-9630329)
chr5 (208-300)||(24173422-24173514)
chr5 (212-300)||(27600812-27600900)
chr5 (220-300)||(35204977-35205057)
chr5 (220-300)||(35212102-35212182)
chr5 (208-258)||(30132884-30132934)
chr5 (208-300)||(13932515-13932607)
chr5 (220-300)||(33970671-33970751)
chr5 (201-268)||(8680627-8680694)
chr5 (208-271)||(73786-73849)
chr5 (204-282)||(5002138-5002216)
chr5 (258-300)||(19211334-19211376)
chr5 (210-271)||(13278969-13279030)
chr5 (208-277)||(13789734-13789803)
chr5 (208-280)||(10228141-10228213)
chr5 (208-282)||(29299429-29299504)
chr5 (208-278)||(1015158-1015228)
chr5 (210-300)||(11932024-11932114)
chr5 (208-278)||(22731261-22731331)
chr5 (208-245)||(30132844-30132881)
chr5 (208-281)||(33478180-33478253)
chr5 (127-164)||(39466671-39466708)
[»] chr4 (52 HSPs)
chr4 (205-300)||(54864118-54864213)
chr4 (205-300)||(43141765-43141860)
chr4 (208-300)||(33622882-33622974)
chr4 (208-300)||(25874754-25874846)
chr4 (208-300)||(33615833-33615925)
chr4 (208-300)||(36196367-36196459)
chr4 (208-300)||(37895257-37895349)
chr4 (212-300)||(50511251-50511339)
chr4 (208-300)||(35877368-35877460)
chr4 (208-300)||(52136701-52136793)
chr4 (213-298)||(8347498-8347584)
chr4 (208-300)||(28460800-28460892)
chr4 (208-300)||(32193477-32193569)
chr4 (220-300)||(40592726-40592806)
chr4 (208-300)||(43556693-43556785)
chr4 (214-300)||(35929064-35929149)
chr4 (208-300)||(29686402-29686494)
chr4 (208-300)||(1205136-1205228)
chr4 (208-289)||(38208314-38208395)
chr4 (212-296)||(7086189-7086273)
chr4 (208-300)||(25756714-25756806)
chr4 (208-300)||(56491074-56491166)
chr4 (205-300)||(27587245-27587340)
chr4 (215-300)||(31853121-31853206)
chr4 (209-277)||(1100899-1100967)
chr4 (208-300)||(4418151-4418243)
chr4 (209-288)||(50511391-50511470)
chr4 (216-283)||(54673381-54673448)
chr4 (210-300)||(42160027-42160117)
chr4 (210-291)||(19350616-19350696)
chr4 (208-281)||(30191969-30192042)
chr4 (212-300)||(22019940-22020028)
chr4 (220-300)||(52966409-52966489)
chr4 (210-281)||(48195963-48196034)
chr4 (250-300)||(50511471-50511521)
chr4 (235-296)||(1140923-1140984)
chr4 (77-179)||(26619934-26620044)
chr4 (208-269)||(29686485-29686546)
chr4 (208-281)||(48361125-48361198)
chr4 (230-300)||(52277989-52278061)
chr4 (208-271)||(24100761-24100824)
chr4 (208-271)||(25756795-25756858)
chr4 (208-278)||(43020831-43020901)
chr4 (208-278)||(47866111-47866181)
chr4 (208-281)||(19150796-19150869)
chr4 (202-283)||(34226383-34226464)
chr4 (125-178)||(34667161-34667214)
chr4 (208-281)||(36132637-36132710)
chr4 (208-281)||(44111747-44111820)
chr4 (209-237)||(4418100-4418128)
chr4 (213-253)||(52966496-52966536)
chr4 (211-271)||(54673315-54673375)
[»] chr8 (31 HSPs)
chr8 (208-300)||(35583937-35584029)
chr8 (210-300)||(29690490-29690580)
chr8 (208-300)||(13831877-13831969)
chr8 (208-298)||(34604837-34604927)
chr8 (208-300)||(7548499-7548591)
chr8 (208-300)||(45372759-45372851)
chr8 (220-300)||(44579907-44579987)
chr8 (208-300)||(43932051-43932143)
chr8 (77-184)||(32897622-32897737)
chr8 (215-300)||(43292622-43292707)
chr8 (208-300)||(9420589-9420681)
chr8 (208-300)||(43409836-43409928)
chr8 (210-300)||(40645714-40645804)
chr8 (208-282)||(45180111-45180185)
chr8 (211-300)||(34745311-34745400)
chr8 (208-271)||(34745259-34745322)
chr8 (208-271)||(43292570-43292633)
chr8 (208-271)||(43932132-43932195)
chr8 (208-283)||(9550111-9550186)
chr8 (215-298)||(24599725-24599808)
chr8 (214-300)||(9633135-9633221)
chr8 (208-278)||(12958851-12958921)
chr8 (208-278)||(22429610-22429680)
chr8 (222-300)||(38298517-38298595)
chr8 (208-278)||(44796417-44796487)
chr8 (210-271)||(5356876-5356937)
chr8 (214-271)||(9633089-9633146)
chr8 (212-281)||(10839836-10839904)
chr8 (208-278)||(35011287-35011359)
chr8 (213-281)||(35149675-35149743)
chr8 (208-300)||(41624740-41624832)
[»] chr1 (30 HSPs)
chr1 (205-300)||(45977093-45977188)
chr1 (208-300)||(13770763-13770855)
chr1 (207-300)||(15699518-15699611)
chr1 (212-300)||(19998465-19998553)
chr1 (208-300)||(27687843-27687935)
chr1 (212-300)||(44224323-44224411)
chr1 (210-300)||(29438192-29438282)
chr1 (208-300)||(51590484-51590576)
chr1 (208-300)||(52279236-52279328)
chr1 (210-300)||(52030872-52030962)
chr1 (208-300)||(13321768-13321860)
chr1 (216-300)||(31050304-31050388)
chr1 (212-300)||(34174892-34174980)
chr1 (208-300)||(13320305-13320397)
chr1 (127-187)||(42471273-42471333)
chr1 (208-300)||(48565581-48565673)
chr1 (208-281)||(26924286-26924359)
chr1 (208-296)||(18038746-18038834)
chr1 (208-300)||(22182767-22182859)
chr1 (205-281)||(26760172-26760248)
chr1 (205-281)||(44939065-44939141)
chr1 (210-300)||(37178964-37179054)
chr1 (209-281)||(34332549-34332621)
chr1 (210-281)||(49944906-49944977)
chr1 (208-271)||(51590432-51590495)
chr1 (208-281)||(519835-519908)
chr1 (208-281)||(18744629-18744701)
chr1 (208-300)||(29064149-29064243)
chr1 (123-167)||(30210222-30210265)
chr1 (146-178)||(47666584-47666616)
[»] chr7 (45 HSPs)
chr7 (208-300)||(41487845-41487937)
chr7 (211-300)||(22618217-22618306)
chr7 (212-300)||(41395668-41395756)
chr7 (220-300)||(45123299-45123379)
chr7 (208-300)||(47280176-47280267)
chr7 (212-300)||(47484027-47484115)
chr7 (205-300)||(7456418-7456513)
chr7 (208-293)||(27320355-27320440)
chr7 (208-296)||(40234768-40234856)
chr7 (205-300)||(10674177-10674272)
chr7 (212-300)||(18064776-18064864)
chr7 (208-300)||(47612344-47612436)
chr7 (215-300)||(37006465-37006550)
chr7 (208-300)||(24164570-24164662)
chr7 (210-300)||(45025648-45025738)
chr7 (208-269)||(24932454-24932515)
chr7 (210-299)||(33901093-33901182)
chr7 (205-300)||(41088906-41089001)
chr7 (210-300)||(29559441-29559531)
chr7 (218-300)||(33039572-33039654)
chr7 (208-281)||(28677319-28677392)
chr7 (208-281)||(36245378-36245451)
chr7 (212-296)||(3633197-3633281)
chr7 (205-269)||(13860302-13860366)
chr7 (216-300)||(39413882-39413966)
chr7 (205-300)||(14543322-14543417)
chr7 (258-300)||(12806962-12807004)
chr7 (205-271)||(24164515-24164581)
chr7 (77-123)||(42078145-42078191)
chr7 (224-281)||(8566099-8566156)
chr7 (223-281)||(2523787-2523845)
chr7 (208-278)||(4826837-4826907)
chr7 (223-281)||(6838448-6838506)
chr7 (208-278)||(28020003-28020073)
chr7 (224-278)||(32811396-32811450)
chr7 (214-300)||(40198658-40198744)
chr7 (212-282)||(41850668-41850738)
chr7 (208-281)||(11668017-11668090)
chr7 (122-183)||(28109304-28109365)
chr7 (210-300)||(28248485-28248579)
chr7 (220-269)||(40599998-40600047)
chr7 (208-269)||(41088854-41088915)
chr7 (210-278)||(1366599-1366667)
chr7 (215-271)||(3633274-3633330)
chr7 (211-271)||(45025599-45025659)
[»] chr6 (14 HSPs)
chr6 (202-300)||(30438797-30438895)
chr6 (208-300)||(28605572-28605664)
chr6 (209-300)||(10145218-10145309)
chr6 (210-300)||(12217494-12217585)
chr6 (208-300)||(12605612-12605704)
chr6 (208-283)||(2913404-2913479)
chr6 (208-299)||(23916182-23916273)
chr6 (210-300)||(8265026-8265116)
chr6 (208-294)||(17599513-17599601)
chr6 (208-300)||(3064937-3065029)
chr6 (212-300)||(9343174-9343262)
chr6 (217-279)||(24986007-24986069)
chr6 (208-282)||(33119906-33119980)
chr6 (205-281)||(9077659-9077735)
[»] chr3 (37 HSPs)
chr3 (211-300)||(27302084-27302173)
chr3 (214-300)||(16123810-16123896)
chr3 (210-300)||(43901635-43901725)
chr3 (210-300)||(53284370-53284460)
chr3 (208-300)||(45113736-45113828)
chr3 (218-300)||(50100206-50100288)
chr3 (208-300)||(31376177-31376269)
chr3 (208-296)||(2544516-2544605)
chr3 (203-300)||(39616908-39617005)
chr3 (208-300)||(53703784-53703877)
chr3 (208-300)||(8769188-8769279)
chr3 (208-279)||(42896144-42896215)
chr3 (211-300)||(48643609-48643698)
chr3 (208-281)||(51517030-51517103)
chr3 (208-279)||(21662961-21663032)
chr3 (225-300)||(21944343-21944418)
chr3 (208-271)||(50659951-50660014)
chr3 (208-271)||(53703732-53703795)
chr3 (202-260)||(2544433-2544491)
chr3 (210-300)||(24489317-24489407)
chr3 (208-281)||(12064911-12064984)
chr3 (208-271)||(31376258-31376321)
chr3 (208-271)||(39616994-39617057)
chr3 (68-123)||(40417622-40417677)
chr3 (205-300)||(44118182-44118277)
chr3 (205-235)||(25294779-25294809)
chr3 (258-300)||(48346502-48346544)
chr3 (208-274)||(53441909-53441975)
chr3 (208-237)||(19227425-19227454)
chr3 (211-280)||(19899687-19899756)
chr3 (214-283)||(25313286-25313355)
chr3 (208-260)||(8266325-8266377)
chr3 (252-300)||(8764286-8764334)
chr3 (215-275)||(42896221-42896281)
chr3 (240-300)||(44518090-44518150)
chr3 (77-113)||(45818038-45818073)
chr3 (264-300)||(46220420-46220456)
[»] scaffold0200 (1 HSPs)
scaffold0200 (205-300)||(25613-25708)
[»] chr2 (42 HSPs)
chr2 (208-300)||(36103395-36103487)
chr2 (210-298)||(40534517-40534605)
chr2 (205-300)||(45076396-45076491)
chr2 (232-300)||(23464522-23464590)
chr2 (217-300)||(15239703-15239786)
chr2 (215-300)||(28143752-28143839)
chr2 (210-300)||(3365279-3365369)
chr2 (126-182)||(29463290-29463346)
chr2 (210-300)||(6971624-6971714)
chr2 (210-300)||(25795242-25795332)
chr2 (220-300)||(27306765-27306843)
chr2 (219-300)||(27311590-27311671)
chr2 (208-282)||(12962777-12962851)
chr2 (214-283)||(38448946-38449015)
chr2 (217-300)||(11724324-11724408)
chr2 (249-300)||(41464768-41464819)
chr2 (217-283)||(11687486-11687552)
chr2 (223-281)||(41153128-41153186)
chr2 (208-278)||(45034473-45034543)
chr2 (208-278)||(45571105-45571175)
chr2 (208-278)||(45574772-45574842)
chr2 (208-278)||(45578439-45578509)
chr2 (208-278)||(45582106-45582176)
chr2 (208-278)||(45585773-45585843)
chr2 (208-278)||(45589440-45589510)
chr2 (208-278)||(45593107-45593177)
chr2 (208-278)||(45596774-45596844)
chr2 (208-278)||(45600441-45600511)
chr2 (208-278)||(45604108-45604178)
chr2 (208-278)||(45607775-45607845)
chr2 (208-278)||(45611442-45611512)
chr2 (208-278)||(45615109-45615179)
chr2 (223-300)||(4410794-4410871)
chr2 (216-300)||(9373404-9373488)
chr2 (208-281)||(12486065-12486138)
chr2 (222-283)||(14329209-14329270)
chr2 (208-269)||(25795323-25795384)
chr2 (195-232)||(39063766-39063803)
chr2 (146-178)||(1529388-1529420)
chr2 (77-109)||(13527103-13527135)
chr2 (216-256)||(21424911-21424951)
chr2 (223-283)||(43713991-43714051)
[»] scaffold0059 (1 HSPs)
scaffold0059 (208-300)||(26588-26680)
[»] scaffold0023 (1 HSPs)
scaffold0023 (208-300)||(112825-112917)
[»] scaffold0110 (1 HSPs)
scaffold0110 (211-300)||(40195-40285)
[»] scaffold0767 (2 HSPs)
scaffold0767 (219-283)||(3880-3944)
scaffold0767 (208-255)||(3811-3858)
[»] scaffold0533 (2 HSPs)
scaffold0533 (217-283)||(3251-3317)
scaffold0533 (213-245)||(3349-3381)
[»] scaffold0474 (1 HSPs)
scaffold0474 (127-183)||(11330-11386)
[»] scaffold0287 (2 HSPs)
scaffold0287 (212-296)||(12804-12888)
scaffold0287 (215-271)||(12755-12811)
[»] scaffold0460 (1 HSPs)
scaffold0460 (217-300)||(12267-12350)
[»] scaffold0377 (1 HSPs)
scaffold0377 (68-123)||(11935-11990)
[»] scaffold0176 (1 HSPs)
scaffold0176 (216-300)||(19348-19433)
[»] scaffold0001 (1 HSPs)
scaffold0001 (208-281)||(156770-156843)
[»] scaffold0015 (1 HSPs)
scaffold0015 (256-300)||(17439-17483)


Alignment Details
Target: chr5 (Bit Score: 144; Significance: 2e-75; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 3522625 - 3522450
Alignment:
Q  14 cacggtggagatggcagtgttgttaattttttcttatcataataagtgtgtacccaaagacacgataggataaaataatgttatcatctttcttatcatg 113  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  3522625 cacggtggaggtggcagcgttgttaattttttcttatcataataagtgtgtatccaaacacacgataggataaaataatgttatcatcttttttatcatg 3522526  T
Q  114 catgcaccaataggataaatgtctatcatgttactatcatatcatatctttatctattttctaattatatcatgtc 189  Q
    | |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3522525 cgtgcaccaataggataaatgtttatcatgttactatcatattatatctttatctattttctaattatatcatgtc 3522450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 479 - 610
Target Start/End: Complemental strand, 3521544 - 3521413
Alignment:
Q  479 ggtggtcatagatagatagtcaacataagtcaaaaccctcgaaatcaacaaacaagaacgaacaccgtcaattgaattctgaaattgaacatgggtggca 578  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3521544 ggtggtcatagatagatagtcaacataagtcaaaaccctcgaaatcaacaaacaagaacgaacaccgtcaattgaattctgaaattgaacatgggtggca 3521445  T
Q  579 taggtatattaccctcaaaaccagaaaaatat 610  Q
    ||||||||||||||||||||||||||||||||    
T  3521444 taggtatattaccctcaaaaccagaaaaatat 3521413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 20502236 - 20502141
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  20502236 tattccctccggtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 20502141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 405 - 479
Target Start/End: Complemental strand, 3521648 - 3521574
Alignment:
Q  405 caggccgccgtactgtcgcaactatttaaaacccttgcatgtaaacacaaacaatccttccttgttcttggaatg 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3521648 caggccgccgtactgtcgcaactatttaaaacccttgcatgtaaacacaaacaatccttccttgttcttggaatg 3521574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 33247294 - 33247386
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  33247294 tccctccggtccttattataagagacaattaacttttttggttcattctataagtgatatatctagtctatatttacaataagatatattaat 33247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 38978888 - 38978796
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| ||||||||||||||||||||||  ||||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  38978888 tccctccgatccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatatattaat 38978796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 29452038 - 29451947
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| ||||||||||||||||||||| | ||||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  29452038 tccctccgatccttattataagaaacaatt-gattttttggttcattgtgtaagtgatgtatctagtatatatttacaataagatacattaat 29451947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 5355697 - 5355605
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||| ||  |||||||  |||||||| |||||||||||| | || |||||||||||||||||||||||||    
T  5355697 tccctccggtccttattataagaaacagttgacttttttagttcattgtgtaagtgatgtatttagtttatatttacaataagatacattaat 5355605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 7537167 - 7537075
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||| ||||||||   ||||||| |||||||| |||||||||||||| || ||||||||| |||||||||||||||    
T  7537167 tccctccggtccttattataaaaaacaattgatttttttggttcattgtgtaagtgatgtatctagtatatatttacgataagatacattaat 7537075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 32455143 - 32455233
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||| ||||||||||  |||  |||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  32455143 tccctccggtccttgttataagaaa--attgacttttttgattcattgtggaagtgatgtatctagtctatatttacaataagatacattaat 32455233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 29002744 - 29002836
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| ||||| |||||||||||||||  |||||||| |||||||| |||||||||||||| |||||||||| | |||||||| ||||||    
T  29002744 tccctccgatccttgttataagaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatattttcgataagatatattaat 29002836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 29874319 - 29874411
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||| |||| ||||||||||||||  |||||||| |||||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  29874319 tccctccggttcttaatataagaaacaattgacttttttggttcattgtttaagtgatgtatctagtctatatttttaataaaatacattaat 29874411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 68 - 178
Target Start/End: Original strand, 26449072 - 26449190
Alignment:
Q  68 caaagacacgataggataaaataatgttatcatctttcttatcatgcatgcaccaa--------taggataaatgtctatcatgttactatcatatcata 159  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||   ||||||||        |||||||| |||||||||||| ||||||||||||||    
T  26449072 caaacacatgataggataaaataatgatatcatctttcttatcatatgtgcaccaaaagcatgataggataagtgtctatcatgtcactatcatatcata 26449171  T
Q  160 tctttatctattttctaat 178  Q
    | |||||| ||||||||||    
T  26449172 tttttatccattttctaat 26449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 9630245 - 9630329
Alignment:
Q  216 gtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||||  ||||||| |||||||| |||||||| ||| | |  |||||||||||||||||||||||||    
T  9630245 gtccttattataagaaacaattaatttttttggttcattgtgtaagtgatatatttagattatatttacaataagatacattaat 9630329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 24173422 - 24173514
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||| ||||||||||||||||| ||||   ||||||  |||||||| ||||||||||||||  ||||||||| |||||||||||||||||    
T  24173422 tccctccagtccttattataagaaataattgatttttttagttcattgtgtaagtgatgtatctaatctatattttcaataagatacattaat 24173514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 27600900 - 27600812
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| |||||||||||||||| ||||   ||||||| |||||||| |||||||| |||||  |||||||||||||||||||||||||||    
T  27600900 tccgatccttattataagaaataattgatttttttgattcattgtgtaagtgatttatctaatctatatttacaataagatacattaat 27600812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 35205057 - 35204977
Alignment:
Q  220 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||  |||||||  |||||||| |||| ||||||||| | ||||||||||||||||||||||||||    
T  35205057 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacattaat 35204977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 35212102 - 35212182
Alignment:
Q  220 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||  |||||||  |||||||| |||| ||||||||| | ||||||||||||||||||||||||||    
T  35212102 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacattaat 35212182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 30132934 - 30132884
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtat 258  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  30132934 tccctccggtccttattataagaaacaattaacttttttgattcattgtat 30132884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 13932607 - 13932515
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| |||||||||||||||||| ||||  |||||| | |||| ||| |||||||||||||| |||| |||||| ||  ||||||||||||    
T  13932607 tccctctggtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacattaat 13932515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 33970671 - 33970751
Alignment:
Q  220 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||| ||||||| ||| ||||||||| |||||||| | || |||||||  ||||| ||||||||||    
T  33970671 ttattataagaaacaattaacttttttattttattgtataaatgatgtatttagtatatatttttaataaaatacattaat 33970751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 8680694 - 8680627
Alignment:
Q  201 gtactattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgta 268  Q
    |||||| ||||||||||||||||||||||||||| ||  |||||| | |||||||| |||||||||||    
T  8680694 gtactactccctccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgta 8680627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 73786 - 73849
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||||||||||||||||||| ||||||||  |||||| | |||||||| ||| ||||||||||    
T  73786 tccctccggtccttattataaaaaacaattgactttttagattcattgtgtaaatgatgtatct 73849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 5002138 - 5002216
Alignment:
Q  204 ctattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 282  Q
    |||||||||||||||||  |||||||||||| ||  |||||||| || |||| |||| |||||||| || |||||||||    
T  5002138 ctattccctccggtcctatttataagaaacatttgacttttttgattaattgcataaatgatgtatttgatctatattt 5002216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 19211376 - 19211334
Alignment:
Q  258 taagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  19211376 taagtgatgtatctagtctatatttacaacaagatacattaat 19211334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 13279030 - 13278969
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||||||||||||||||||||||| ||  |||||| | || ||||| ||||||||||||||    
T  13279030 cctccggtccttattataagaaacagttgactttttagatttattgtgtaagtgatgtatct 13278969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 208 - 277
Target Start/End: Original strand, 13789734 - 13789803
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtcta 277  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||    
T  13789734 tccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtcta 13789803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 10228213 - 10228141
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatat 280  Q
    ||||||||||| |  |||| ||||||| ||  |||||||| |||||||||||| |||||||||| ||||||||    
T  10228213 tccctccggtcttatttattagaaacatttgacttttttgattcattgtataaatgatgtatctcgtctatat 10228141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 29299504 - 29299429
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgt-ttcattgtataagtgatgtatctggtctatattt 282  Q
    |||||||||||||  |||||||||||| ||  ||||||||  |||||||||||| ||||||||  |||||||||||    
T  29299504 tccctccggtcctagttataagaaacatttgacttttttgaattcattgtataaatgatgtattcggtctatattt 29299429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 1015158 - 1015228
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  1015158 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 1015228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 11932114 - 11932024
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||  ||| |||||||| |||  ||||||| || ||| ||||| |||||||| ||||||||||||   | |||||||||||||    
T  11932114 cctccggtcctatttaaaagaaacatttaatttttttgatttattatataaatgatgtatttggtctatattttagacaagatacattaat 11932024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 22731261 - 22731331
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  22731261 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 22731331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 30132844 - 30132881
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttt 245  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  30132844 tccctccggtccttattataagaaaaaattaacttttt 30132881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 33478253 - 33478180
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||||||||| ||  | |||||| ||||||| |||| |||||||| ||| |||||||    
T  33478253 tccctccggtcctatttataagaaacatttgacatttttgattcattgcataaatgatgtatttggcctatatt 33478180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 39466671 - 39466708
Alignment:
Q  127 gataaatgtctatcatgttactatcatatcatatcttt 164  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  39466671 gataaatgtatatcctgttactatcatatcatatcttt 39466708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 54864213 - 54864118
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54864213 tattccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacattaat 54864118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 43141765 - 43141860
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  43141765 tattccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaat 43141860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 33622882 - 33622974
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  33622882 tccctccggtccttattataagaaacaattaacttttttggttcattgtataggtgatgtatctagtttatatttacaataagatacattaat 33622974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 25874846 - 25874754
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  25874846 tccctccggtccttattataagaaagaattaatttttttggttcattgtataagtgatgtatctagtctatatttacaataaaatacattaat 25874754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 33615925 - 33615833
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||| ||||||||   ||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  33615925 tccctccggtccttattataaaaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 33615833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 36196367 - 36196459
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||| |||||||||||||| | ||||| ||||||||||||||||||||||    
T  36196367 tccctccggtccttattataagaaacaattgatttttttggttcattttataagtgatgtatatagtctacatttacaataagatacattaat 36196459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 37895257 - 37895349
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  37895257 tccctccggtccttattataagaaacagttgatttttttggttcattgtataagtgatgtatctagtctacatttacaataaaatacattaat 37895349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 50511251 - 50511339
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||| | | ||||||||||||||||||||||||||    
T  50511251 tccggtctttattataagaaacaattaacttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatacattaat 50511339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 35877460 - 35877368
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| ||| ||||||||||||||||||||||  ||||||| |||||||| |||||||||||| | | ||||||||||||||||||||||||||    
T  35877460 tcccaccgatccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatacattaat 35877368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 52136701 - 52136793
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||| ||||| |||||| | |||||||| |||||||||||| | ||||||||||| || |||||||||||||    
T  52136701 tccctccggtccttattataagaaaaaattaactttttaggttcattgtgtaagtgatgtatttagtctatatttataacaagatacattaat 52136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 8347498 - 8347584
Alignment:
Q  213 ccggtccttattataagaaacaatt-agcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacatta 298  Q
    |||||||||||||||||||||| || |  ||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  8347498 ccggtccttattataagaaacatttgattttttttggttcattgtataaatgatgtatctagtctatatttacaataagatacatta 8347584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 28460892 - 28460800
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| | ||||||||||||||||||| ||||||| | |||||| |||||||||||||| | |||||||||||||| |||||| ||||||    
T  28460892 tccctccgattcttattataagaaacaattggctttttagattcattatataagtgatgtatttagtctatatttacaacaagataaattaat 28460800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 32193477 - 32193569
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||| | ||||| |||||||| ||||||||||  |||||| |||||||||    
T  32193477 tccctccggtccttattataagaaacaattgacttttttggttcattatgtaagtaatgtatctagtctatatttctaataaggtacattaat 32193569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 40592726 - 40592806
Alignment:
Q  220 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||||| || |||||||| || |||||||||||||    
T  40592726 ttattataagaaacaattaactttttggattcattgtataagtgatgtatctagtttatatttataacaagatacattaat 40592806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 43556693 - 43556785
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||||   ||||||  ||| |||| ||||||| |||||| ||||| ||||||||||||||||||||||    
T  43556693 tccctccggtccttattataagaaacaattgatttttttagttcgttgtgtaagtgacgtatctagtctacatttacaataagatacattaat 43556785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 35929149 - 35929064
Alignment:
Q  214 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| |||||||||||||||||| | ||||||| |||||||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  35929149 cggtcattattataagaaacaatt-gattttttggttcattgtgtaagtgatgtatctaatctatatttataataagatacattaat 35929064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 29686402 - 29686494
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||| ||  |||||| | |||||||| ||| |||||||||| ||||||||||| || || ||||||||||    
T  29686402 tccctccggtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctagtctatatttataacaatatacattaat 29686494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 1205228 - 1205136
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgt-ttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| || ||||||||||||| |||| | |||||| | |||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  1205228 tccctccgatctttattataagaaaaaatt-gattttttatattcattgtctaagtgatgtatctagtctatatttataataagatacattaat 1205136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 38208395 - 38208314
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataa 289  Q
    ||||||||||||||| ||||||||||||||  | |||||  |||||||| |||||||||||||| |||||||||| ||||||    
T  38208395 tccctccggtccttaatataagaaacaattgacatttttagttcattgtttaagtgatgtatctagtctatattttcaataa 38208314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 7086273 - 7086189
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 296  Q
    ||||||||||||||||||||||| ||  |||||| | |||||||| |||||||||||||||||||| ||||| ||  ||||||||    
T  7086273 tccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgtatctggtctacatttataacgagatacat 7086189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 25756714 - 25756806
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||| ||||  |||||| | |||| ||| |||||||||||||| |||| |||||| ||  ||||||||||||    
T  25756714 tccctccggtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacattaat 25756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 56491074 - 56491166
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||| | |||||  |||||| | |||||||||||||| |||||||| ||||||||||| ||  || |||||||||    
T  56491074 tccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgaggtacattaat 56491166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 27587245 - 27587340
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| ||||||||||||||||||||||||||||  |||||| | || ||| ||||| |||||||||| || |||||||| ||  ||||||||||||    
T  27587245 tatttcctccggtccttattataagaaacaattgactttttagatttattatataaatgatgtatctagtgtatatttataacgagatacattaat 27587340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 31853206 - 31853121
Alignment:
Q  215 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| ||||||||||||| | ||  |||||| | |||||||| |||||||||||||| ||||||||||| || |||||||||||||    
T  31853206 ggtctttattataagaaaaatttgactttttaggttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaat 31853121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 1100899 - 1100967
Alignment:
Q  209 ccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtcta 277  Q
    |||||||||||||||||||||||||| ||  |||||| | |||||||| |||||||||||||| |||||    
T  1100899 ccctccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgtatctagtcta 1100967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 4418243 - 4418151
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||| ||||   ||||| | |||||||| |||||||||||| | || |||||||| || || ||||||||||    
T  4418243 tccctccggtccttattataagaaaaaattgattttttaggttcattgtgtaagtgatgtatttagtttatatttataacaaaatacattaat 4418151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 50511391 - 50511470
Alignment:
Q  209 ccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaata 288  Q
    |||||||||||||||||||||||||| ||  |||||||  |||||||| |||| ||||| ||| || |||||||||||||    
T  50511391 ccctccggtccttattataagaaacacttgacttttttagttcattgtgtaagggatgtgtctagtttatatttacaata 50511470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 54673448 - 54673381
Alignment:
Q  216 gtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    ||||||||||||||||||||||  |||||| | |||||| | |||||||||||||| |||||||||||    
T  54673448 gtccttattataagaaacaattgactttttaggttcattatgtaagtgatgtatctagtctatattta 54673381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 42160117 - 42160027
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||| ||||||||||||||| ||  |||||| |  ||||| | |||||||||||| | ||||||||||| || |||||||||||||    
T  42160117 cctccggtctttattataagaaacatttgactttttagaatcattatgtaagtgatgtatttagtctatatttataacaagatacattaat 42160027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 210 - 291
Target Start/End: Original strand, 19350616 - 19350696
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataaga 291  Q
    |||||| || |||||||||||||||||||  ||||||| |||||||| ||||||| |||||| |||| |||||| |||||||    
T  19350616 cctccgatctttattataagaaacaattaatttttttggttcattgtgtaagtga-gtatctagtctttatttataataaga 19350696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 30192042 - 30191969
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    ||||||||||| |  |||||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||    
T  30192042 tccctccggtcgtatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatatt 30191969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 22019940 - 22020028
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||| |||||||| |||||| | |||||| | |||||||||| |||  |||||||||| ||  |||| |||||||    
T  22019940 tccggtccttattataagtaacaattaactttttagattcattctgtaagtgatgtgtctaatctatatttataacgagatgcattaat 22020028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 52966409 - 52966489
Alignment:
Q  220 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||| | ||  ||||||   ||||||||||||||||||||||| ||||||||||| || ||||| |||||||    
T  52966409 ttattataagaaaaatttgactttttaagttcattgtataagtgatgtatctagtctatatttataacaagatgcattaat 52966489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 210 - 281
Target Start/End: Complemental strand, 48196034 - 48195963
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  48196034 cctccggtcctatttataagaaacatttgacttttttggttcattgcataaatgatgtatttggtctatatt 48195963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 50511471 - 50511521
Alignment:
Q  250 tcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||| |||| ||||||||| || |||||||||||||||||||||||||    
T  50511471 tcattgtgtaagggatgtatctagtttatatttacaataagatacattaat 50511521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 1140984 - 1140923
Alignment:
Q  235 attagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 296  Q
    |||| |||||| | |||||||| |||||||||||||||||||||||||| || || ||||||    
T  1140984 attaactttttagattcattgtgtaagtgatgtatctggtctatatttataacaaaatacat 1140923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 26620044 - 26619934
Alignment:
Q  77 gataggataaaataatgttatcatctttcttatcatgcatgcaccaat--------aggataaatgtctatcatgttactatcatatcatatctttatct 168  Q
    |||| |||||||||||| |||||| ||| |||||||||||||| |||         |||||||||||||||||||||| ||||||||| |||  ||||      
T  26620044 gataagataaaataatgctatcatattttttatcatgcatgcatcaaatgcatgaaaggataaatgtctatcatgttattatcatatcctattcttattc 26619945  T
Q  169 attttctaatt 179  Q
    |||||||||||    
T  26619944 attttctaatt 26619934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 29686546 - 29686485
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 269  Q
    |||||||||||||||||||||||||||||||  |||||   |||||||||||| | ||||||    
T  29686546 tccctccggtccttattataagaaacaattaattttttaaattcattgtataattaatgtat 29686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 48361198 - 48361125
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    ||||||| |||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  48361198 tccctcctgtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 48361125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 52277989 - 52278061
Alignment:
Q  230 aaacaattagcttttttgtttcattgtataagtgat--gtatctggtctatatttacaataagatacattaat 300  Q
    |||||| || |||||||| |||||| ||||||||||  |||| | ||||||||||||||||||||| ||||||    
T  52277989 aaacaaataacttttttgattcattatataagtgatatgtatttagtctatatttacaataagatatattaat 52278061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 24100761 - 24100824
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    |||||||| |||||||||||||||| ||||| |||||| | ||||||| |||| | ||||||||    
T  24100761 tccctccgatccttattataagaaataattaactttttagattcattgaataattaatgtatct 24100824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 25756858 - 25756795
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||||||||||||||||||||||||||||  ||||||   ||||||| |||| | ||||||||    
T  25756858 tccctccggtccttattataagaaacaattgactttttatgttcattggataattaatgtatct 25756795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 43020901 - 43020831
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  43020901 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 43020831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 47866181 - 47866111
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  47866181 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 47866111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 19150869 - 19150796
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||| ||||||  |||||||||||| ||  |||||| | ||||||| |||| |||||||| |||||||||||    
T  19150869 tccctctggtcctatttataagaaacattttactttttcgattcattgcataaatgatgtatttggtctatatt 19150796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 34226383 - 34226464
Alignment:
Q  202 tactattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    ||||||||||| |||  ||  |||||| ||||||||  |||||||| ||||||| |||| |||||||| |||||||| ||||    
T  34226383 tactattcccttcggatctatttataataaacaatttacttttttgattcattgaataattgatgtatttggtctattttta 34226464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 34667161 - 34667214
Alignment:
Q  125 aggataaatgtctatcatgttactatcatatcatatctttatctattttctaat 178  Q
    ||||||||| | |||||||| ||||||||||| |||||||||| ||||| ||||    
T  34667161 aggataaatatttatcatgtcactatcatatcctatctttatccattttttaat 34667214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 36132637 - 36132710
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    ||||||| |||||  |||||||||| | ||  |||||||| |||||||||||| |||||||| | |||||||||    
T  36132637 tccctccagtcctatttataagaaatatttgacttttttgattcattgtataaatgatgtatttagtctatatt 36132710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 44111747 - 44111820
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||||||||| ||  |||||||| || |||  |||| |||||||| |||||||||||    
T  44111747 tccctccggtcctatttataagaaacatttgacttttttgattaattacataaatgatgtatttggtctatatt 44111820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 4418100 - 4418128
Alignment:
Q  209 ccctccggtccttattataagaaacaatt 237  Q
    |||||||||||||||||||||||||||||    
T  4418100 ccctccggtccttattataagaaacaatt 4418128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 52966536 - 52966496
Alignment:
Q  213 ccggtccttattataagaaacaattagcttttttgtttcat 253  Q
    |||||||||||||||||||||||||  |||||||| |||||    
T  52966536 ccggtccttattataagaaacaattgacttttttggttcat 52966496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 54673315 - 54673375
Alignment:
Q  211 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    |||||||||||||||||||||||| ||  |||||| | ||||||| |||||| ||| ||||    
T  54673315 ctccggtccttattataagaaacatttgactttttaggttcattgaataagtaatgcatct 54673375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 35584029 - 35583937
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  35584029 tccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaat 35583937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 29690580 - 29690490
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  29690580 cctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttataataagatacattaat 29690490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 13831877 - 13831969
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  13831877 tcccttcggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatatagtctatatttacaataagatacattaat 13831969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 34604927 - 34604837
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacatta 298  Q
    ||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34604927 tccctccggtccttattataagaaacaattgatttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacatta 34604837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 7548499 - 7548591
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||| | | |||||||||||||||||| |||||||    
T  7548499 tccctccggtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatgcattaat 7548591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 45372851 - 45372759
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||| |||||||  |||||||| |||| ||| |||||||||||||| |||||||||| |||||||||||||||||    
T  45372851 tccctccggtccttattataagtaacaattgacttttttgattcaatgtgtaagtgatgtatctagtctatattttcaataagatacattaat 45372759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 44579907 - 44579987
Alignment:
Q  220 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||| |||||||| || ||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  44579907 ttattataagaaacaattaacttttttgatttattgtataagtaatatatctagtctatatttacaataagatacattaat 44579987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 43932051 - 43932143
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||||| || ||||||||||  |||||||||| || |||||||||||||    
T  43932051 tccctccggtccttattataagaaacaattgactttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaat 43932143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 32897622 - 32897737
Alignment:
Q  77 gataggataaaataatgttatcatctttcttatcatgcatgcaccaa--------taggataaatgtctatcatgttactatcatatcatatctttatct 168  Q
    |||||||||||| ||||||||| |||||||||||||   ||||||||        ||||||||||||||||||||| |||||| ||||||||||| |||     
T  32897622 gataggataaaaaaatgttatcctctttcttatcatatctgcaccaaacgtatgataggataaatgtctatcatgtcactatcctatcatatcttgatcc 32897721  T
Q  169 attttctaattatatc 184  Q
    |||||||||| |||||    
T  32897722 attttctaatcatatc 32897737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 43292707 - 43292622
Alignment:
Q  215 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  43292707 ggtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 43292622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 9420589 - 9420681
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||| | |||||  | |||| | |||||||||||||| |||||||||||||||||||| ||  || |||||||||    
T  9420589 tccctccggtccttattataagcagcaattgacgttttagattcattgtataagtaatgtatctggtctatatttataacgaggtacattaat 9420681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 43409836 - 43409928
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||| | |||||  |||||| | |||||||||||||| |||||||| ||||||||||| ||  || |||||||||    
T  43409836 tccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgaggtacattaat 43409928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 40645714 - 40645804
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| ||||||||||||||||||| ||  ||||||   |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  40645714 cctccagtccttattataagaaacatttgactttttaagttcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 40645804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 45180185 - 45180111
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 282  Q
    ||||| ||||| ||||||||| ||||||||  |||||||| |||||||| |||||||||||||| ||||||||||    
T  45180185 tcccttcggtctttattataaaaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatattt 45180111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 211 - 300
Target Start/End: Complemental strand, 34745400 - 34745311
Alignment:
Q  211 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| || ||||||||||||||| ||   ||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  34745400 ctccgatctttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 34745311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 34745259 - 34745322
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||| | |||| | ||||||||    
T  34745259 tccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatct 34745322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 43292570 - 43292633
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||| | |||| | ||||||||    
T  43292570 tccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatct 43292633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 43932195 - 43932132
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||| |||| | ||||||||    
T  43932195 tccctccggtccttattataagaaacaattgactttttagattcattgaataattaatgtatct 43932132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 9550111 - 9550186
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    ||||||||||| ||||||||||||| ||||   |||||   |||||||  |||||||||||||| |||||||||||    
T  9550111 tccctccggtctttattataagaaataattgattttttaaattcattgggtaagtgatgtatctagtctatattta 9550186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 298
Target Start/End: Complemental strand, 24599808 - 24599725
Alignment:
Q  215 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacatta 298  Q
    ||||||||| |||||||||||||   ||||| | |||||||||||| ||||||||||   ||||||||| ||| | ||||||||    
T  24599808 ggtccttataataagaaacaattgattttttagattcattgtataactgatgtatctaacctatatttataatgaaatacatta 24599725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 9633221 - 9633135
Alignment:
Q  214 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| |||||||||||| ||  ||||||   |||||||| |||   |||||||| ||||||||||| || |||||||||||||    
T  9633221 cggtccttcttataagaaacatttgactttttaagttcattgtgtaaacaatgtatctagtctatatttataacaagatacattaat 9633135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 12958921 - 12958851
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  12958921 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 12958851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 22429680 - 22429610
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  22429680 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 22429610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 38298517 - 38298595
Alignment:
Q  222 attataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||| ||||  ||||||   |||||||| |||||||||||||| | ||||||||| ||  ||||||||||||    
T  38298517 attataagaaataattgactttttaagttcattgtgtaagtgatgtatctagcctatatttataacgagatacattaat 38298595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 44796487 - 44796417
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  44796487 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 44796417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 5356937 - 5356876
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||| ||| |||||||||| |||| ||| |||||| | || ||||||||||||||||||||    
T  5356937 cctcccgtctttattataagcaacagttaactttttagatttattgtataagtgatgtatct 5356876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 9633089 - 9633146
Alignment:
Q  214 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||||||||||||||||||||||  | |||| | |||||||||||| | ||||||||    
T  9633089 cggtccttattataagaaacaattgacgttttagattcattgtataattaatgtatct 9633146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 281
Target Start/End: Complemental strand, 10839904 - 10839836
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||  |||||||||||| ||| |||||| | ||||||| |||| |||||||| |||||||||||    
T  10839904 tccggtcctatttataagaaacatttaacttttt-gattcattgcataaatgatgtatttggtctatatt 10839836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 35011359 - 35011287
Alignment:
Q  208 tccctccggtcct-tat-tataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    ||||||||||||| ||| ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  35011359 tccctccggtcctatatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 35011287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 35149675 - 35149743
Alignment:
Q  213 ccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    ||||||||  |||||||||||| ||  |||||||| || |||| |||| |||||||| |||||||||||    
T  35149675 ccggtcctatttataagaaacatttgacttttttgattaattgcataaatgatgtatttggtctatatt 35149743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 41624740 - 41624832
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| || |||||||||||||||  |  |||||| | ||| || |||||||||||||| | ||||||||||| || || |||| |||||    
T  41624740 tccctccgatctttattataagaaacatatgactttttaggttccttatataagtgatgtatttagtctatatttataacaacatacgttaat 41624832  T

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Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 45977093 - 45977188
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| ||||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  45977093 tattacctccggtccttattataagaaacaattaacttttttggtttattgtataggtgatgtatctagtctatatttacaataagatacattaat 45977188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 13770855 - 13770763
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||| |||||||||||||||| ||  |||||||  || ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  13770855 tccctccggttcttattataagaaacagtttacttttttaatttattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 13770763  T

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Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 15699611 - 15699518
Alignment:
Q  207 ttccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| |||||||||||| |||||||||   ||||| | || |||||||||||||||||||| |||||||||||||| |||||||||||||    
T  15699611 ttccctcccgtccttattatatgaaacaattgaatttttaggtttattgtataagtgatgtatctagtctatatttacaacaagatacattaat 15699518  T

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Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 19998553 - 19998465
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||   ||||| | |||||||| |||||||||||||| |||||||||||||| |||||| ||||||    
T  19998553 tccggtccttattataagaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaat 19998465  T

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Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 27687843 - 27687935
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||| |||||||||||||| ||||   ||||||  |||||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  27687843 tccctccggttcttattataagaaataattgaattttttagttcattatgtaagtgatgtatctagtctatatttacaataagatacattaat 27687935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 44224411 - 44224323
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| ||||||||||| ||| |||||  ||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  44224411 tccggcccttattataaaaaataattaatttttttggttcattgtacaagtgatgtatctagactatatttacaataagatacattaat 44224323  T

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Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 29438282 - 29438192
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| || || |||||||||||||||  |||||||  |||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  29438282 cctccgctcattgttataagaaacaattgacttttttagttcattgtgtaagtgatgtatctagtctatattttcaataagatacattaat 29438192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 51590576 - 51590484
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||| | ||  | |||| | |||||||| |||||||||||||| ||||||||||| || |||||||||||||    
T  51590576 tccctccggtccttattataagaaaaagttgaccttttagattcattgtgtaagtgatgtatctagtctatatttataacaagatacattaat 51590484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 52279236 - 52279328
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| |||||||||||| |||| |||||   ||||||| |||||||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  52279236 tccctctggtccttattattagaagcaattgatttttttggttcattgtgtaagtgatgtatcaagtctatatttacaataagatatattaat 52279328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 52030872 - 52030962
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||| ||||   ||||| ||||||| || ||||||||||||||  | |||||||| ||||||||||||||||    
T  52030872 cctccggtccttattataagaaaaaattgattttttagtttcatcgtgtaagtgatgtatctaatttatatttataataagatacattaat 52030962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 13321860 - 13321768
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| |||||||||||||||||||| ||   ||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  13321860 tccctctggtccttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 13321768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 31050388 - 31050304
Alignment:
Q  216 gtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||  |||||| | || ||||| |||||||||||| | |||||||||||||| || ||||||||||    
T  31050388 gtccttattataagaaacaattgactttttaggtttattgtgtaagtgatgtatttagtctatatttacaacaaaatacattaat 31050304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 34174892 - 34174980
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| |||||||||||||||||||||  |||||| | |||||||| |||||||||||| | || ||||||| ||| |||||||||||||    
T  34174892 tccgatccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatttagtttatatttgcaacaagatacattaat 34174980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 13320305 - 13320397
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||| ||||||||||||||||||||  ||||||  || ||||| ||| |||||||| |   ||||||||||||||||||| ||||||    
T  13320305 tccctccggttcttattataagaaacaattaattttttttgtttattgtgtaaatgatgtatttaaactatatttacaataagatatattaat 13320397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 42471333 - 42471273
Alignment:
Q  127 gataaatgtctatcatgttactatcatatcatatctttatctattttctaattatatcatg 187  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||||||  |||||||    
T  42471333 gataaatgtctatcatatcattatcatatcatatctttatctattttctaatcctatcatg 42471273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 48565673 - 48565581
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||| | ||| ||||||   |||||||| || ||||||||| | ||||||||||| || ||||||| |||||    
T  48565673 tccctccggtccttattataagaaaaagttaactttttaagttcattgtgtaggtgatgtatttagtctatatttataacaagatactttaat 48565581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 26924359 - 26924286
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  26924359 tccctccggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatatt 26924286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 18038834 - 18038746
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 296  Q
    ||||||||||||||||||||| ||||| ||  |||||| | |||||||| ||||||||||||||  |||| ||||| ||  ||||||||    
T  18038834 tccctccggtccttattataaaaaacatttgactttttagattcattgtttaagtgatgtatctaatctacatttataacgagatacat 18038746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 22182767 - 22182859
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||| |||||||  |||||| | || ||||| |||||||||||||| | | ||||||| ||  |||| |||||||    
T  22182767 tccctccggtccttattataagtaacaattgactttttagatttattgtgtaagtgatgtatctagcccatatttataacgagatgcattaat 22182859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 26760172 - 26760248
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    ||||||||| ||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  26760172 tattccctcgggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatatt 26760248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 44939065 - 44939141
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||| |||||||||||  |||||||||||| ||  |||||||  |||||||||||| |||||||| |||||||||||    
T  44939065 tatttcctccggtcctatttataagaaacatttgactttttttattcattgtataaatgatgtatttggtctatatt 44939141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 37179054 - 37178964
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||| ||| ||||||||||||| ||  |||||||| || ||||||||| |||||||| | ||||||||||   | |||||||||||||    
T  37179054 cctccggccctaattataagaaacatttgacttttttgatttattgtataaatgatgtatttagtctatattttagacaagatacattaat 37178964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 34332621 - 34332549
Alignment:
Q  209 ccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    ||||| ||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  34332621 ccctctggtcctatttataagaaacatttgacttttttgattcattggataaatgatgtatttggtctatatt 34332549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 281
Target Start/End: Complemental strand, 49944977 - 49944906
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||  ||| |||||||| ||   ||||||| |||||||||||| |||||||| |||||||||||    
T  49944977 cctccggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatatt 49944906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 51590432 - 51590495
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||||||||||||||||||| ||||||||  |||||||| ||||| | |||| | ||||||||    
T  51590432 tccctccggtccttattataaaaaacaattgacttttttggttcatagaataattaatgtatct 51590495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 519835 - 519908
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||| ||||| ||  |||||||| || ||||||||| |||||||| || ||||||||    
T  519835 tccctccggtcctatttataataaacatttgacttttttgatttattgtataaatgatgtatttgatctatatt 519908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 18744701 - 18744629
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  ||| |||||||| ||| |||||||  ||||||| |||| |||||||| |||||||||||    
T  18744701 tccctccggtcctatttaaaagaaacatttaactttttttattcattgcataaatgatgtat-tggtctatatt 18744629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 29064149 - 29064243
Alignment:
Q  208 tccctccggtccttatta---taagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||| ||||||||||   ||||||| |||||  ||||| | |||||||||||| |||||||| |  |||||||||||||||| ||| ||||||    
T  29064149 tccctcccgtccttattactataagaaaaaattat-tttttagattcattgtataaatgatgtatttaatctatatttacaataaaatatattaat 29064243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 30210222 - 30210265
Alignment:
Q  123 ataggataaatgtctatcatgttactatcatatcatatctttatc 167  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||    
T  30210222 ataggataaatgt-tatcatgtcattatcatatcatatctttatc 30210265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 47666616 - 47666584
Alignment:
Q  146 actatcatatcatatctttatctattttctaat 178  Q
    ||||||||||| |||||||||||||||||||||    
T  47666616 actatcatatcctatctttatctattttctaat 47666584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 41487937 - 41487845
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  41487937 tccctccggtccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 41487845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 211 - 300
Target Start/End: Complemental strand, 22618306 - 22618217
Alignment:
Q  211 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  22618306 ctccggtccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatatttacaacaagatacattaat 22618217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 41395668 - 41395756
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| |||||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  41395668 tccgatccttattataagaaacaattaacttttttaattcattgtataagtgatgtatctagtctatatttataataagatatattaat 41395756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 45123379 - 45123299
Alignment:
Q  220 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  45123379 ttattataagaaataattaacttttttgattcattgtataagtgatgtatctaatctatatttataataagatacattaat 45123299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 47280176 - 47280267
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| || ||||||||||||||||||| |||||||||| |||||||||| | |||||| | ||||||||||||||||||||||||||||    
T  47280176 tccctccgatctttattataagaaacaattaacttttttgtt-cattgtataaataatgtatttagtctatatttacaataagatacattaat 47280267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 47484027 - 47484115
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||   ||||||  |||||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  47484027 tccggtccttattataagaaacaattgattttttttattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaat 47484115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 7456418 - 7456513
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| |||||||||||||||||||||| | ||  |||||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||    
T  7456418 tattcgctccggtccttattataagaaatatttgactttttagattcattgtataaatgatgtatctagtctatatttacaacaagatacattaat 7456513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 27320440 - 27320355
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagata 293  Q
    |||||| |||||||||||||||||||||||   ||||||| |||||||||||||| |||| ||| |||||||||||||||||||||    
T  27320440 tccctctggtccttattataagaaacaattgatttttttggttcattgtataagtaatgtttctagtctatatttacaataagata 27320355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 40234768 - 40234856
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 296  Q
    |||||||||| |||||||||||||||||||  |||||| | |||||||| ||| |||||||||| |||||||||||||| |||||||||    
T  40234768 tccctccggttcttattataagaaacaattgactttttagattcattgtgtaactgatgtatctagtctatatttacaacaagatacat 40234856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 10674272 - 10674177
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||| |||||||||||||||||||||  |||||| | |||||| | ||||||||||||||  |||||||||| || |||||||||||||    
T  10674272 tattccctccgatccttattataagaaacaattgactttttagattcattatgtaagtgatgtatctaatctatatttataacaagatacattaat 10674177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 18064864 - 18064776
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||| ||||||||||| ||  | |||||  |||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  18064864 tccggtccttaatataagaaacagttgacatttttagttcattgtttaagtgatgtatctagtctatattttcaataagatacattaat 18064776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 47612436 - 47612344
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||| | |||||  |||||| | |||||||||||||| |||||||| ||||||||||| ||  ||||||||||||    
T  47612436 tccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgagatacattaat 47612344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 37006465 - 37006550
Alignment:
Q  215 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| ||||||||||||||||||  |||||||  || |||||||||||||||||||  || ||||||||||||| |||||||||||    
T  37006465 ggtcgttattataagaaacaattgacttttttagtttattgtataagtgatgtatccagtttatatttacaatatgatacattaat 37006550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 24164662 - 24164570
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| |||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||||||||  || |||||||||||||    
T  24164662 tccctccgatccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttctaacaagatacattaat 24164570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 45025738 - 45025648
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||| ||||||||||||||| ||   ||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  45025738 cctccggtctttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 45025648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 24932515 - 24932454
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 269  Q
    |||||||| |||||||||||||| ||||||| |||||||  |||||||||||||||||||||    
T  24932515 tccctccgatccttattataagagacaattaacttttttagttcattgtataagtgatgtat 24932454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 299
Target Start/End: Complemental strand, 33901182 - 33901093
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaa 299  Q
    ||||||||| ||||||||||||||| ||  |||||| | |||||| | ||| |||||||||| ||||||||||| || ||||||||||||    
T  33901182 cctccggtctttattataagaaacatttgactttttagattcattatgtaaatgatgtatctagtctatatttataacaagatacattaa 33901093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 41089001 - 41088906
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| ||||||||||||||||||||||||||||  |||||| | || || || ||||| |||||||| ||||||||||| ||  | ||||||||||    
T  41089001 tattacctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaat 41088906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 29559441 - 29559531
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| |||||||||||||||||||||  |||||| | ||||| || ||||| |||||||| ||||||||||| ||  | ||||||||||    
T  29559441 cctccgatccttattataagaaacaattgactttttaggttcatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaat 29559531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 33039572 - 33039654
Alignment:
Q  218 ccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| |||||||||||  |||||| | |||||||| | || ||||||||| |||||||||||||| | |||||||||||    
T  33039572 ccttattaaaagaaacaattgactttttaggttcattgtgttagggatgtatctagtctatatttacaacatgatacattaat 33039654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 28677319 - 28677392
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  28677319 tccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 28677392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 36245378 - 36245451
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  36245378 tccctccggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 36245451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 3633197 - 3633281
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 296  Q
    ||||||||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||| ||||| ||  ||||||||    
T  3633197 tccggtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttataacgagatacat 3633281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 13860366 - 13860302
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 269  Q
    ||||||||||| |||||||||||||||||||||  |||||| | |||||||||||| | ||||||    
T  13860366 tattccctccgatccttattataagaaacaattgactttttagattcattgtataattaatgtat 13860302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 39413966 - 39413882
Alignment:
Q  216 gtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| ||||||||||||||||   |||||   |||||||||||||||||||||||  || |||||||||| | |||||||||||    
T  39413966 gtcctaattataagaaacaattgattttttaagttcattgtataagtgatgtatctaatcaatatttacaacatgatacattaat 39413882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 14543417 - 14543322
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| || |||||||||||||||||||||   | |||   || ||| | |||||||||||||| |||||||||||||  |||||||||||||    
T  14543417 tattcccttcgatccttattataagaaacaattgattgtttaagtttattatgtaagtgatgtatctagtctatatttacatcaagatacattaat 14543322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 12807004 - 12806962
Alignment:
Q  258 taagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||| | ||||||||||||||||||||||||||||    
T  12807004 taagtgatgtatgtagtctatatttacaataagatacattaat 12806962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 24164515 - 24164581
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||||| | |||| | ||||||||    
T  24164515 tattccctccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatct 24164581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 42078145 - 42078191
Alignment:
Q  77 gataggataaaataatgttatcatctttcttatcatgcatgcaccaa 123  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  42078145 gatatgataaaataatgttatcatatttcttatcatgcgtgcaccaa 42078191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 8566099 - 8566156
Alignment:
Q  224 tataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    ||||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||    
T  8566099 tataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatatt 8566156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 2523787 - 2523845
Alignment:
Q  223 ttataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||| ||  |||||||| ||||||| ||||  |||||||||||||||||||    
T  2523787 ttataagaaacatttgacttttttgattcattgcataaacgatgtatctggtctatatt 2523845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 4826907 - 4826837
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  4826907 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 4826837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 6838506 - 6838448
Alignment:
Q  223 ttataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  6838506 ttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 6838448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 28020003 - 28020073
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||| ||||||  |||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  28020003 tccctctggtcctatttataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 28020073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 32811396 - 32811450
Alignment:
Q  224 tataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    ||||||||||||||  |||||||| ||||||| |||| |||||||| ||||||||    
T  32811396 tataagaaacaatttacttttttgattcattgaataattgatgtatttggtctat 32811450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 40198744 - 40198658
Alignment:
Q  214 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||| |||||||||||||| |  |||||||  || ||| | |||| ||||||| | |||||||||||||| ||||| |||||||    
T  40198744 cggtcctaattataagaaacaaatgacttttttagtttattatgtaagcgatgtatttagtctatatttacaacaagatgcattaat 40198658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 41850738 - 41850668
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 282  Q
    |||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| || |||||||||    
T  41850738 tccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttgctctatattt 41850668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 11668017 - 11668090
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||| ||| || ||||||||    
T  11668017 tccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatatt 11668090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 28109304 - 28109365
Alignment:
Q  122 aataggataaatgtctatcatgttactatcatatcatatctttatctattttctaattatat 183  Q
    |||| ||||||||| ||| | |||||||||||||| |||||||||| | ||||| |||||||    
T  28109304 aatatgataaatgtttattacgttactatcatatcttatctttatccagtttcttattatat 28109365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 28248579 - 28248485
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttc----attgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||| |||||| |||||||||||| |||||| | |||    ||||| |||||||||||| | ||||||||||| ||  |||| |||||||    
T  28248579 cctccggtcattattacaagaaacaattaactttttaggttcattaattgtgtaagtgatgtatatagtctatatttataacgagatgcattaat 28248485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 40600047 - 40599998
Alignment:
Q  220 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 269  Q
    |||||||||| |||||||| |||||| | |||||||| ||||||||||||    
T  40600047 ttattataagcaacaattaactttttaggttcattgtgtaagtgatgtat 40599998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 41088854 - 41088915
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 269  Q
    |||||||||||||||||| |||||||||||  |||||| | ||||||| |||| | ||||||    
T  41088854 tccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtat 41088915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 1366599 - 1366667
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  1366599 cctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 1366667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 3633330 - 3633274
Alignment:
Q  215 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    |||||||||||||||||| | ||  |||||| | |||||||| ||||||||||||||    
T  3633330 ggtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatct 3633274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 45025599 - 45025659
Alignment:
Q  211 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    |||||||||||||||||||||||||||   ||||||| ||||| | |||| | ||||||||    
T  45025599 ctccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatct 45025659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 30438895 - 30438797
Alignment:
Q  202 tactattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| |||||||| |||||||||||||||| ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  30438895 tactactccctccgatccttattataagaaataattaacttttttggtttattgtataagtgatgtatctagtctatatttacaataaaatacattaat 30438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 28605572 - 28605664
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||| |||||||||||| |   ||||||||||||||||||||||||||    
T  28605572 tccctctggtccttattataagaaacaattaacttttttggttcattgtgtaagtgatgtatttaaactatatttacaataagatacattaat 28605664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 10145218 - 10145309
Alignment:
Q  209 ccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||| |||||||||||||||| ||||   ||||||| |||||  |||||||||||||||| ||||||||||||||||||||||||||||    
T  10145218 ccctccgatccttattataagaaataattgatttttttgattcatcatataagtgatgtatctagtctatatttacaataagatacattaat 10145309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 12217494 - 12217585
Alignment:
Q  210 cctccggtccttattataagaaacaatt-agcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| |||||||||||| |||||||| |  ||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12217494 cctccgatccttattataaaaaacaattgattttttttggtttattgtataagtgatgtatctagtctatatttacaataagatacattaat 12217585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 12605612 - 12605704
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| |||||||||||||||||||||   ||||||  ||||||   |||||||||||| | ||||||||||||||||||||||||||||    
T  12605612 tccctccgttccttattataagaaacaattgattttttttattcattacgtaagtgatgtatttagtctatatttacaataagatacattaat 12605704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 2913479 - 2913404
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    |||||||||||||||||||||| |||||||  |||||| | |||||||||||||| |||||||| |||||||||||    
T  2913479 tccctccggtccttattataagcaacaattgactttttaggttcattgtataagtaatgtatctagtctatattta 2913404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 208 - 299
Target Start/End: Complemental strand, 23916273 - 23916182
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaa 299  Q
    ||||||||||||||||||||||||||||||  |||||| | |||||||| || ||||| |||||  |||||||||| ||  |||||||||||    
T  23916273 tccctccggtccttattataagaaacaattgactttttagattcattgtgtatgtgatatatctaatctatatttataacgagatacattaa 23916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 8265116 - 8265026
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| |||||||||||||||| | ||   |||||   |||||||| |||||||||||||| ||||||||||| || |||||||||||||    
T  8265116 cctccgttccttattataagaaaaagttgattttttaagttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaat 8265026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 17599601 - 17599513
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtata--agtgatgtatctggtctatatttacaataagatac 294  Q
    ||||| |||||||||||| || ||| ||||  |||||||| |||||||||||  |||  ||||||| ||||||||||||||||||||||    
T  17599601 tcccttcggtccttattacaataaataattgacttttttgattcattgtatataagttgtgtatctagtctatatttacaataagatac 17599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 3065029 - 3064937
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||  |||||||||| | ||  |||||||| ||||||| |||| || ||||| ||||||||||||   | |||||||||||||    
T  3065029 tccctccggtcctatttataagaaatattttacttttttgattcattgcataaatggtgtatttggtctatattttatacaagatacattaat 3064937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 9343262 - 9343174
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||| |||||||||  |||||    || ||||| ||| | |||||||| ||||||||||| || |||||||||||||    
T  9343262 tccggtccttattataggaaacaattgacttttcaaatttattgtgtaaataatgtatctagtctatatttataacaagatacattaat 9343174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 24986069 - 24986007
Alignment:
Q  217 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctata 279  Q
    |||||||||||||| ||||||  |||||| | ||||||| |||| |||||||| |||||||||    
T  24986069 tccttattataagagacaattcactttttaggttcattggataattgatgtatatggtctata 24986007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 33119906 - 33119980
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 282  Q
    ||||| |||||||  |||||||||||| ||  ||| |||| |||||||||||| || ||||| ||||||||||||    
T  33119906 tcccttcggtcctatttataagaaacatttgacttctttgattcattgtataaatgttgtatttggtctatattt 33119980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 9077735 - 9077659
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||| |  |||||||||| | ||  |||||||| ||||||| |||| ||||| || |||||||||||    
T  9077735 tattccctccggtcttatttataagaaatatttgacttttttgattcattgcataaatgatgcatttggtctatatt 9077659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 27302084 - 27302173
Alignment:
Q  211 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  27302084 ctccggtctttattataagaaagaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaattagatacattaat 27302173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 16123896 - 16123810
Alignment:
Q  214 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  16123896 cggtccttattataaaaaacaattaacttttttggttcattgtataagtaatgtatctagtctatatttacaataagatatattaat 16123810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 43901725 - 43901635
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||| ||||||| || |||||||||| |||||||||||||||||    
T  43901725 cctccggtccttattataagaaacaattaacttttttggttcattgtgtaaatgatgtacctagtctatattttcaataagatacattaat 43901635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 53284460 - 53284370
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||   ||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  53284460 cctccggtccttattataagaaacaattgatttttttggtttattgtataagtgatgtatctagtctacatttacaataagatacattaat 53284370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 45113736 - 45113828
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| | |||||||||||||||||||||   ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  45113736 tccctctgatccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 45113828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 50100206 - 50100288
Alignment:
Q  218 ccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||  |||||||  ||||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  50100206 ccttattataagaaacaattgacttttttagttcattgtataagtgatgtatctagtctatatttataataagatacgttaat 50100288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 31376177 - 31376269
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  31376177 tccctccggtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataagaagatacattaat 31376269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 2544605 - 2544516
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat-atttacaataagatacat 296  Q
    |||||||||||||||||| |||||||||||  |||||| | ||||||||||||||||||||| |||||||| ||||| || |||||||||    
T  2544605 tccctccggtccttattacaagaaacaattgactttttagattcattgtataagtgatgtatttggtctataatttataacaagatacat 2544516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 203 - 300
Target Start/End: Original strand, 39616908 - 39617005
Alignment:
Q  203 actattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| ||||||||||||||||||||||||||| ||  |||||  | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  39616908 actactccctccggtccttattataagaaacatttgacttttaaggttcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 39617005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 53703877 - 53703784
Alignment:
Q  208 tccctccggtccttattataagaaacaattag-cttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||| || | | | |||| | |||||||| |||||||||||||| ||||||||||| || |||||||||||||    
T  53703877 tccctccggtccttattataagaaaaaagttgaccttttaggttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaat 53703784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 8769279 - 8769188
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||| | ||| ||||||   |||||||| ||||||||||||||  |||||||||| || |||||||||||||    
T  8769279 tccctccggtccttattataagaaa-agttaactttttaagttcattgtgtaagtgatgtatctaatctatatttataacaagatacattaat 8769188  T

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Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 42896144 - 42896215
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctata 279  Q
    ||||||||||| |||||||||||| |||||  |||||| | ||||||| |||| ||||||||||||||||||    
T  42896144 tccctccggtctttattataagaagcaattcactttttaggttcattgaataactgatgtatctggtctata 42896215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 48643609 - 48643698
Alignment:
Q  211 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||||||||  |||||| | || || || ||||| |||||||| ||||||||||| ||  | ||||||||||    
T  48643609 ctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaat 48643698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 51517103 - 51517030
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  51517103 tccctccggtcctatttataagaaacatttgacttttttggttcattgcataaatgatgtatttggtctatatt 51517030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 21663032 - 21662961
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctata 279  Q
    ||||||||||| |  |||||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||    
T  21663032 tccctccggtcttatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctata 21662961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 21944418 - 21944343
Alignment:
Q  225 ataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||   ||||||| ||| |||| |||||| ||||||| |||||||| |||| ||||||||||||||    
T  21944418 ataagaaacaattgatttttttggttccttgtgtaagtggtgtatctagtctatatctacactaagatacattaat 21944343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 50659951 - 50660014
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    |||||| |||||||||||| ||||||||||   ||||||| |||||||| ||||||||||||||    
T  50659951 tccctctggtccttattattagaaacaattgatttttttggttcattgtgtaagtgatgtatct 50660014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 53703732 - 53703795
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||| | |||| | ||||||||    
T  53703732 tccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatct 53703795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 2544433 - 2544491
Alignment:
Q  202 tactattccctccggtccttattataagaaacaattagcttttttgtttcattgtataa 260  Q
    ||||| ||||||||||||||||||||||||||||||  |||||| | ||||||| ||||    
T  2544433 tactactccctccggtccttattataagaaacaattgactttttaggttcattgaataa 2544491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 24489317 - 24489407
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| |||||||||||||| ||| ||||  |||||||  || ||| | || ||||||||||| || ||||||||| |||||||||||||||    
T  24489317 cctctggtccttattataaaaaataattgacttttttagtttattttgtaggtgatgtatctagtttatatttactataagatacattaat 24489407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 12064911 - 12064984
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| || | |||||||| |||||||||||    
T  12064911 tccctccggtcctacttataagaaacattttacttttttgattcattgcattaatgatgtatttggtctatatt 12064984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 31376321 - 31376258
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    |||||||||||||||||| |||||||||||  |||||||| ||||| | |||| | ||||||||    
T  31376321 tccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatct 31376258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 39617057 - 39616994
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    |||||||||||||||||| |||||||||||  |||||||| ||||| | |||| | ||||||||    
T  39617057 tccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatct 39616994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 40417622 - 40417677
Alignment:
Q  68 caaagacacgataggataaaataatgttatcatctttcttatcatgcatgcaccaa 123  Q
    |||| ||| |||| |||||||||||| |||||| ||||||||||||| ||||||||    
T  40417622 caaacacatgatatgataaaataatgctatcatatttcttatcatgcgtgcaccaa 40417677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 44118182 - 44118277
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| ||||||||  |||||||| |||| | ||  |||||| | |||||||| ||| |||||||||| ||||||||||| || || ||||||||||    
T  44118182 tattacctccggtttttattataggaaatatttgactttttagattcattgtgtaaatgatgtatctagtctatatttataacaatatacattaat 44118277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 235
Target Start/End: Original strand, 25294779 - 25294809
Alignment:
Q  205 tattccctccggtccttattataagaaacaa 235  Q
    |||||||||||||||||||||||||||||||    
T  25294779 tattccctccggtccttattataagaaacaa 25294809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 48346502 - 48346544
Alignment:
Q  258 taagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||| ||||||||||| || |||||||||||||    
T  48346502 taagtgatgtatctagtctatatttataacaagatacattaat 48346544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 53441909 - 53441975
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggt 274  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| ||||    
T  53441909 tccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggt 53441975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 237
Target Start/End: Complemental strand, 19227454 - 19227425
Alignment:
Q  208 tccctccggtccttattataagaaacaatt 237  Q
    ||||||||||||||||||||||||||||||    
T  19227454 tccctccggtccttattataagaaacaatt 19227425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 19899756 - 19899687
Alignment:
Q  211 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatat 280  Q
    |||||||||||||||||| ||||||||  || | | | |||||||| ||| |||||||||| ||||||||    
T  19899756 ctccggtccttattataaaaaacaattgactctataggttcattgtgtaaatgatgtatctagtctatat 19899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 25313286 - 25313355
Alignment:
Q  214 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    ||||||||||||||| ||| ||||   ||||| | |||||||| |||||||||||| | |||||||||||    
T  25313286 cggtccttattataaaaaataattgattttttaggttcattgtgtaagtgatgtatttagtctatattta 25313355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 8266377 - 8266325
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataa 260  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||||||||    
T  8266377 tccctccggtcctatttataagaaacatttgacttttttgattcattgtataa 8266325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 8764334 - 8764286
Alignment:
Q  252 attgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| ||||||||||||||  |||||||||| || |||||||||||||    
T  8764334 attgtgtaagtgatgtatctaatctatatttataacaagatacattaat 8764286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 42896281 - 42896221
Alignment:
Q  215 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtc 275  Q
    |||||||||||||||||||||||  ||||||   ||||||| |||| |||||||| |||||    
T  42896281 ggtccttattataagaaacaattcactttttacgttcattgaataactgatgtatatggtc 42896221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 44518150 - 44518090
Alignment:
Q  240 cttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| |||||||| ||| |||||||| ||||||||||||   | |||||||||||||    
T  44518150 cttttttgattcattgtctaaatgatgtatttggtctatattttagacaagatacattaat 44518090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 45818073 - 45818038
Alignment:
Q  77 gataggataaaataatgttatcatctttcttatcatg 113  Q
    |||||||||||||||||||||| ||||||||||||||    
T  45818073 gataggataaaataatgttatc-tctttcttatcatg 45818038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 46220456 - 46220420
Alignment:
Q  264 atgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| || |||||||||||||||||||||||||    
T  46220456 atgtatctagtatatatttacaataagatacattaat 46220420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 25613 - 25708
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| || ||| |||||||||||||||| ||||||||||| ||||||||||||||||    
T  25613 tatttcctccggtccttattataaaaaacaattaacttttttggtttattatataagtgatgtatctagtctatatttataataagatacattaat 25708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 7e-26; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 36103395 - 36103487
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||| ||||||||| | |||||  |||||||| |||||||||||||| | ||||||||||||||||||||||||||    
T  36103395 tccctccggtccttattataataaacaattaacatttttagttcattgtgtaagtgatgtatctagactatatttacaataagatacattaat 36103487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 210 - 298
Target Start/End: Original strand, 40534517 - 40534605
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacatta 298  Q
    ||||||||||||||||||||||||||||   ||||||  |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  40534517 cctccggtccttattataagaaacaattgatttttttagttcattgtataaatgatgtatctagtctatatttacaataagatacatta 40534605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 45076491 - 45076396
Alignment:
Q  205 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| |||||||||||||||||| ||||||||  |||||||| |||||||| |||||||||||||| |||||||| |||||||| ||||||||||    
T  45076491 tattctctccggtccttattataaaaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatatgtacaataaaatacattaat 45076396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 23464522 - 23464590
Alignment:
Q  232 acaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  23464522 acaattaacttttttggttcattgtataagagatgtatctagtctatatttacaataagatacattaat 23464590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 15239703 - 15239786
Alignment:
Q  217 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||   ||| ||| |||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  15239703 tccttattataagaaacaattgattttgttggttcattgtgtaagtgatgtatctagtctatatttacaataagatatattaat 15239786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 28143752 - 28143839
Alignment:
Q  215 ggtccttattata--agaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||  ||||||||||   ||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  28143752 ggtccttattatattagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttataataagatacattaat 28143839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 3365279 - 3365369
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||| |||| ||||||||||||| | ||| |||||| | |||||||||||||||||||||||  |||||||||| || |||||| ||||||    
T  3365279 cctctggtctttattataagaaaaatttaactttttaggttcattgtataagtgatgtatctaatctatatttataacaagatatattaat 3365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 29463290 - 29463346
Alignment:
Q  126 ggataaatgtctatcatgttactatcatatcatatctttatctattttctaattata 182  Q
    |||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||    
T  29463290 ggataaatgtttatcatgtcactatcatatcttatcttcatctattttctaattata 29463346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 6971714 - 6971624
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| ||||||||||||||||||| ||  |||||| | |||||||| ||| ||||||||||  |||||||||| || || ||||||||||    
T  6971714 cctcctgtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctaatctatatttataacaatatacattaat 6971624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 25795242 - 25795332
Alignment:
Q  210 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||||||||  |||||| | || || || ||||| |||||||| ||||||||||| ||  | ||||||||||    
T  25795242 cctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaat 25795332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 27306843 - 27306765
Alignment:
Q  220 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||   ||||||| || ||||| |||||   |||||| ||||||||||||||||||||||||||||    
T  27306843 ttattataagaaacaattgatttttttggtttattgtgtaagtc--gtatctagtctatatttacaataagatacattaat 27306765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 27311590 - 27311671
Alignment:
Q  219 cttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||  |||||| | ||||||||| || |||| ||||| ||||||||||| || ||||||| |||||    
T  27311590 cttattataagaaacaattgactttttaggttcattgtacaaatgatatatctagtctatatttataacaagatacgttaat 27311671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 12962851 - 12962777
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 282  Q
    |||||| ||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| ||||||||||||    
T  12962851 tccctctggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattt 12962777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 38448946 - 38449015
Alignment:
Q  214 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    |||||||||| |||| ||||||||  ||||||   |||||||| ||||||||||||||| ||||||||||    
T  38448946 cggtccttatcataaaaaacaattgactttttatgttcattgtgtaagtgatgtatctgatctatattta 38449015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 11724408 - 11724324
Alignment:
Q  217 tccttattataagaaacaattag-cttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||||||||||||||||||||| |||| | | || ||||| ||||| || ||||| ||||||||||| ||  ||||||||||||    
T  11724408 tccttattataagaaacaattagactttatagatttattgtgtaagtaatatatctagtctatatttataacgagatacattaat 11724324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 41464819 - 41464768
Alignment:
Q  249 ttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||| |||||||||||||| ||||||||||| ||  ||||||||||||    
T  41464819 ttcattgtgtaagtgatgtatctagtctatatttataacgagatacattaat 41464768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 11687486 - 11687552
Alignment:
Q  217 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    |||||||||||||||||||||  |||| |   || ||||| |||||||||||||| |||||||||||    
T  11687486 tccttattataagaaacaattgactttataaatttattgtgtaagtgatgtatctagtctatattta 11687552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 41153128 - 41153186
Alignment:
Q  223 ttataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  41153128 ttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 41153186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45034543 - 45034473
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45034543 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45034473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45571175 - 45571105
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45571175 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45571105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45574842 - 45574772
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45574842 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45574772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45578509 - 45578439
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45578509 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45578439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45582176 - 45582106
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45582176 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45582106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45585843 - 45585773
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45585843 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45585773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45589510 - 45589440
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45589510 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45589440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45593177 - 45593107
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45593177 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45593107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45596844 - 45596774
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45596844 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45596774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45600511 - 45600441
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45600511 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45600441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45604178 - 45604108
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45604178 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45607845 - 45607775
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45607845 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45607775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45611512 - 45611442
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45611512 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45611442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 45615179 - 45615109
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 278  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45615179 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45615109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 4410794 - 4410871
Alignment:
Q  223 ttataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||| ||| | |||||| || |||| |||| |||||||| || |||||||||  || |||||||||||||    
T  4410794 ttataagaaacatttaacctttttgatttattgcataaatgatgtatttgatctatattttaaacaagatacattaat 4410871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 9373404 - 9373488
Alignment:
Q  216 gtccttattataagaaacaatt-agcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| ||||||||||||||| || ||||  |||| ||| | |||||||||||| | |||||||||||||| ||||||| |||||    
T  9373404 gtccttgttataagaaacaattgagtttttaagttt-attatgtaagtgatgtatgtagtctatatttacaacaagatacgttaat 9373488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 12486138 - 12486065
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||| ||||||  ||| |||||||||||  |||||| | ||||||| |||| |||||||| |||||||||||    
T  12486138 tccctctggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggtctatatt 12486065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 14329270 - 14329209
Alignment:
Q  222 attataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    ||||||||| ||||||  ||| || | |||||||| ||||||||||||||| ||||||||||    
T  14329270 attataagagacaattgacttgttaggttcattgtgtaagtgatgtatctgatctatattta 14329209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 25795384 - 25795323
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 269  Q
    |||||||||||||||||| |||||||||||  |||||| | ||||||| |||| | ||||||    
T  25795384 tccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtat 25795323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 39063803 - 39063766
Alignment:
Q  195 ctaaatgtactattccctccggtccttattataagaaa 232  Q
    ||||||||| || |||||||||||||||||||||||||    
T  39063803 ctaaatgtagtactccctccggtccttattataagaaa 39063766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 1529420 - 1529388
Alignment:
Q  146 actatcatatcatatctttatctattttctaat 178  Q
    |||||||||||||||||||||| ||||||||||    
T  1529420 actatcatatcatatctttatccattttctaat 1529388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 13527135 - 13527103
Alignment:
Q  77 gataggataaaataatgttatcatctttcttat 109  Q
    |||||||||||||||||||||||| ||||||||    
T  13527135 gataggataaaataatgttatcatatttcttat 13527103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 21424911 - 21424951
Alignment:
Q  216 gtccttattataagaaacaattagcttttttgtttcattgt 256  Q
    ||||||||||||||||||||||  |||||| ||||||||||    
T  21424911 gtccttattataagaaacaatttactttttagtttcattgt 21424951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 43713991 - 43714051
Alignment:
Q  223 ttataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    |||||||||||||||   ||||||| ||||||| |||| | |||||| |||||||||||||    
T  43713991 ttataagaaacaattgatttttttgattcattgaataaattatgtatttggtctatattta 43714051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 26588 - 26680
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||||||||||  |||  |||||| | |||||| | |||||||||||||| |||||||||||||| |||||||||||||    
T  26588 tccctccggtccttattataagaaaggattgactttttaggttcattatgtaagtgatgtatctagtctatatttacaacaagatacattaat 26680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 112825 - 112917
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||| |||||||||||||||||||||||  | |||| | ||||||||| || ||||||||||  |||||||||| || |||||||||||||    
T  112825 tccctcgggtccttattataagaaacaattgacgttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaat 112917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 40195 - 40285
Alignment:
Q  211 ctccggtccttattataagaaacaattagctttttt-gtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||||||||| ||| || | | |||||| | |||||||| |||||||||||||| |||||||||||||| |||||| ||||||    
T  40195 ctccggtccttattataaaaaaaaaattgattttttaggttcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaat 40285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 3944 - 3880
Alignment:
Q  219 cttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    |||||||||||||||||||  |||||| | |||||||| |||||||||||||| |||||||||||    
T  3944 cttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatattta 3880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 3811 - 3858
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattg 255  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  3811 tccctccggtccttattataagaaacaattgacttttttgattcattg 3858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 3251 - 3317
Alignment:
Q  217 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 283  Q
    |||||||||||||||||||||  ||||||   |||||||| |||||||||||||| |||||||||||    
T  3251 tccttattataagaaacaattgactttttatgttcattgtgtaagtgatgtatctagtctatattta 3317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 3381 - 3349
Alignment:
Q  213 ccggtccttattataagaaacaattagcttttt 245  Q
    |||||||||||||||||||||||||| ||||||    
T  3381 ccggtccttattataagaaacaattaacttttt 3349  T

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Target: scaffold0474 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 11330 - 11386
Alignment:
Q  127 gataaatgtctatcatgttactatcatatcatatctttatctattttctaattatat 183  Q
    ||||||||| |||||||| |||||||||  ||||||||||| |||||||||||||||    
T  11330 gataaatgtttatcatgtcactatcatactatatctttatcaattttctaattatat 11386  T

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Target: scaffold0287 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 12888 - 12804
Alignment:
Q  212 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 296  Q
    ||||||||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||| ||||| ||  ||||||||    
T  12888 tccggtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttataacgagatacat 12804  T

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Target: scaffold0287; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 12755 - 12811
Alignment:
Q  215 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 271  Q
    |||||||||||||||||| | ||  |||||| | |||||||| ||||||||||||||    
T  12755 ggtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatct 12811  T

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Target: scaffold0460 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 12350 - 12267
Alignment:
Q  217 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||| ||| ||||  |||||| | || ||||| | |||||||||||| | |||||||||||| ||||||| |||||    
T  12350 tccttattataaaaaataattgactttttaggtttattgtgttagtgatgtatctagcctatatttacaagaagatacgttaat 12267  T

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Target: scaffold0377 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 11935 - 11990
Alignment:
Q  68 caaagacacgataggataaaataatgttatcatctttcttatcatgcatgcaccaa 123  Q
    |||| ||| |||| ||||||||||||||||||| |||| |||||||| ||||||||    
T  11935 caaaaacatgatatgataaaataatgttatcatatttcctatcatgcgtgcaccaa 11990  T

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Target: scaffold0176 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 19433 - 19348
Alignment:
Q  216 gtccttattataagaaacaattagcttttttg-tttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    ||||| ||||| | ||||||||  |||||||| ||| ||| | |||||||||||  | ||||||||||||||||||||| ||||||    
T  19433 gtcctgattattataaacaattgacttttttggttttattttgtaagtgatgtaagtagtctatatttacaataagatatattaat 19348  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 156770 - 156843
Alignment:
Q  208 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 281  Q
    |||||||||||||  |||||||||||| ||| |||||||  ||||||| ||||  ||| ||| |||||||||||    
T  156770 tccctccggtcctatttataagaaacatttaacttttttaattcattgcataaacgatatatttggtctatatt 156843  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 17483 - 17439
Alignment:
Q  256 tataagtgatgtatctggtctatatttacaataagatacattaat 300  Q
    |||||||||||| ||| |||||||||||| | |||||||||||||    
T  17483 tataagtgatgtgtctagtctatatttactacaagatacattaat 17439  T

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