View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14177_high_70 (Length: 204)
Name: NF14177_high_70
Description: NF14177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14177_high_70 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 3159885 - 3160053
Alignment:
| Q |
18 |
agacacccagacacgtcttcaatctgaaatgtcacactaaatgaatccagacatgtttcaaaggttcattcattagtcactagtcactactcctccatat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3159885 |
agacacccagacacgtcttcaatctgaaatgtcacattaaatgaatccagacatgtttcaaaggttcattcattagtcactagtcactactcctccatat |
3159984 |
T |
|
| Q |
118 |
aaaagtccaaacaaccacagataaaatttacaccaaccaagcttcaatacttcaaacaaacactaaaac |
186 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3159985 |
aaaagtccaaacaaccacagataaaatttacaccaaccaagcttcaatacttcaaacaaacactaaaac |
3160053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University