View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14177_low_3 (Length: 780)

Name: NF14177_low_3
Description: NF14177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14177_low_3
NF14177_low_3
[»] chr4 (38 HSPs)
chr4 (191-761)||(19124974-19125558)
chr4 (13-193)||(19125706-19125886)
chr4 (333-524)||(12005699-12005891)
chr4 (295-505)||(14169810-14170021)
chr4 (407-505)||(14156364-14156461)
chr4 (446-521)||(6727530-6727605)
chr4 (423-509)||(19129426-19129511)
chr4 (407-484)||(6827266-6827342)
chr4 (26-102)||(1964962-1965038)
chr4 (452-524)||(40915566-40915638)
chr4 (106-181)||(22845457-22845532)
chr4 (106-173)||(35609500-35609567)
chr4 (106-181)||(36685885-36685960)
chr4 (105-175)||(21646274-21646344)
chr4 (105-155)||(22445477-22445527)
chr4 (106-155)||(9685423-9685472)
chr4 (119-183)||(400588-400652)
chr4 (107-155)||(35609722-35609770)
chr4 (109-155)||(12005482-12005528)
chr4 (18-83)||(56511109-56511172)
chr4 (310-367)||(12720396-12720453)
chr4 (119-176)||(35796765-35796822)
chr4 (109-181)||(28245539-28245611)
chr4 (105-180)||(32002322-32002398)
chr4 (106-181)||(21498794-21498869)
chr4 (106-181)||(22863473-22863548)
chr4 (106-181)||(35788658-35788733)
chr4 (106-181)||(35788893-35788968)
chr4 (106-181)||(39902573-39902648)
chr4 (106-181)||(40717451-40717526)
chr4 (106-181)||(44118869-44118944)
chr4 (106-181)||(53814939-53815014)
chr4 (107-181)||(52559566-52559640)
chr4 (106-155)||(18528467-18528516)
chr4 (106-155)||(22231318-22231367)
chr4 (120-173)||(27464272-27464325)
chr4 (104-181)||(35175034-35175111)
chr4 (106-155)||(53559300-53559349)
[»] chr8 (28 HSPs)
chr8 (333-522)||(21505208-21505399)
chr8 (407-488)||(10122826-10122906)
chr8 (401-519)||(23520642-23520759)
chr8 (399-522)||(38076186-38076310)
chr8 (106-183)||(11232439-11232516)
chr8 (106-181)||(11232204-11232279)
chr8 (407-474)||(42776864-42776931)
chr8 (407-505)||(11179409-11179506)
chr8 (106-181)||(16050028-16050103)
chr8 (105-183)||(5590377-5590455)
chr8 (109-181)||(39052942-39053014)
chr8 (105-172)||(4828301-4828368)
chr8 (106-181)||(5931959-5932034)
chr8 (105-172)||(6559458-6559525)
chr8 (106-181)||(8929016-8929091)
chr8 (106-181)||(19256596-19256671)
chr8 (106-181)||(35682791-35682866)
chr8 (108-155)||(45031373-45031420)
chr8 (107-181)||(18004107-18004181)
chr8 (106-176)||(20301265-20301335)
chr8 (106-176)||(21087897-21087967)
chr8 (106-172)||(24075316-24075382)
chr8 (107-181)||(24532432-24532506)
chr8 (119-181)||(38447450-38447512)
chr8 (106-155)||(4828093-4828142)
chr8 (106-155)||(39960217-39960266)
chr8 (106-155)||(42846615-42846664)
chr8 (108-169)||(45031164-45031225)
[»] chr3 (36 HSPs)
chr3 (312-519)||(55252324-55252532)
chr3 (333-479)||(14170297-14170445)
chr3 (342-519)||(55256363-55256541)
chr3 (18-107)||(55254783-55254872)
chr3 (377-522)||(6028878-6029024)
chr3 (105-181)||(8018967-8019043)
chr3 (106-181)||(54368515-54368590)
chr3 (105-155)||(34610586-34610636)
chr3 (106-155)||(45138981-45139030)
chr3 (104-155)||(1800240-1800291)
chr3 (106-181)||(35038204-35038279)
chr3 (106-181)||(54567891-54567966)
chr3 (105-183)||(22729097-22729175)
chr3 (106-176)||(45138812-45138882)
chr3 (119-175)||(1681710-1681766)
chr3 (118-170)||(8142429-8142481)
chr3 (111-175)||(50930707-50930771)
chr3 (106-181)||(1723086-1723161)
chr3 (106-181)||(6487343-6487418)
chr3 (106-181)||(11589784-11589859)
chr3 (104-155)||(14839745-14839796)
chr3 (106-181)||(20327624-20327699)
chr3 (105-148)||(21717358-21717401)
chr3 (106-181)||(35038438-35038513)
chr3 (110-181)||(49629604-49629675)
chr3 (105-175)||(13574930-13575000)
chr3 (105-155)||(13741110-13741160)
chr3 (119-181)||(16926972-16927034)
chr3 (107-181)||(20327860-20327934)
chr3 (105-155)||(45828044-45828094)
chr3 (120-181)||(23691216-23691277)
chr3 (120-181)||(23708016-23708077)
chr3 (120-181)||(23726472-23726533)
chr3 (120-181)||(23744928-23744989)
chr3 (120-181)||(24063453-24063514)
chr3 (106-155)||(24866222-24866271)
[»] chr6 (32 HSPs)
chr6 (355-521)||(18282175-18282341)
chr6 (342-519)||(4885090-4885268)
chr6 (342-519)||(31439900-31440078)
chr6 (106-181)||(6400630-6400705)
chr6 (107-182)||(2753256-2753331)
chr6 (106-181)||(13353200-13353275)
chr6 (106-181)||(33796325-33796400)
chr6 (106-176)||(9705258-9705328)
chr6 (106-183)||(12330189-12330266)
chr6 (106-181)||(4868587-4868662)
chr6 (422-501)||(9210528-9210607)
chr6 (106-181)||(9705019-9705094)
chr6 (106-176)||(4868823-4868893)
chr6 (107-181)||(16570158-16570232)
chr6 (106-180)||(33494539-33494613)
chr6 (106-183)||(6542953-6543030)
chr6 (106-183)||(12330301-12330377)
chr6 (106-183)||(13740678-13740755)
chr6 (106-183)||(13746178-13746255)
chr6 (106-154)||(5572394-5572442)
chr6 (105-181)||(13740915-13740991)
chr6 (105-181)||(13746415-13746491)
chr6 (105-181)||(27656457-27656533)
chr6 (105-183)||(6065974-6066050)
chr6 (106-181)||(8026388-8026463)
chr6 (106-181)||(27653216-27653291)
chr6 (105-183)||(3680009-3680087)
chr6 (106-176)||(12329954-12330024)
chr6 (106-155)||(6623420-6623469)
chr6 (106-155)||(8026629-8026678)
chr6 (106-175)||(10145525-10145594)
chr6 (106-155)||(30256837-30256886)
[»] chr1 (27 HSPs)
chr1 (312-519)||(41492528-41492735)
chr1 (342-519)||(41488294-41488471)
chr1 (18-104)||(41490073-41490159)
chr1 (342-519)||(16456972-16457149)
chr1 (295-488)||(45438168-45438360)
chr1 (399-488)||(29805962-29806051)
chr1 (18-104)||(16478111-16478197)
chr1 (106-183)||(25145495-25145572)
chr1 (107-183)||(2859638-2859714)
chr1 (106-190)||(52907374-52907458)
chr1 (376-475)||(16475985-16476088)
chr1 (106-181)||(4113016-4113091)
chr1 (409-501)||(36274114-36274210)
chr1 (106-181)||(39348129-39348204)
chr1 (106-181)||(40079151-40079226)
chr1 (106-176)||(4098413-4098482)
chr1 (106-183)||(11924918-11924995)
chr1 (106-181)||(2859402-2859477)
chr1 (105-176)||(5109488-5109559)
chr1 (106-181)||(17452689-17452764)
chr1 (407-470)||(45433459-45433521)
chr1 (129-183)||(369632-369686)
chr1 (119-181)||(27413581-27413643)
chr1 (110-176)||(38668364-38668430)
chr1 (106-155)||(40316060-40316109)
chr1 (106-155)||(51589017-51589066)
chr1 (107-176)||(52650782-52650851)
[»] chr7 (24 HSPs)
chr7 (389-520)||(41388140-41388272)
chr7 (105-183)||(26239925-26240003)
chr7 (107-176)||(42985134-42985203)
chr7 (106-181)||(29469604-29469679)
chr7 (107-181)||(48243448-48243522)
chr7 (106-183)||(48243071-48243148)
chr7 (106-181)||(2544457-2544532)
chr7 (106-181)||(21861528-21861603)
chr7 (106-181)||(25620135-25620210)
chr7 (106-181)||(29469839-29469914)
chr7 (106-181)||(36277236-36277311)
chr7 (106-155)||(48661565-48661614)
chr7 (107-155)||(26028972-26029020)
chr7 (105-176)||(1596832-1596903)
chr7 (106-181)||(21054963-21055038)
chr7 (106-181)||(21861293-21861368)
chr7 (106-181)||(34027392-34027467)
chr7 (109-155)||(4506957-4507003)
chr7 (405-519)||(20186794-20186908)
chr7 (106-176)||(47710447-47710517)
chr7 (106-176)||(47722103-47722173)
chr7 (107-176)||(3038095-3038164)
chr7 (106-155)||(6782886-6782935)
chr7 (119-172)||(23839100-23839153)
[»] chr5 (24 HSPs)
chr5 (345-521)||(19763996-19764171)
chr5 (342-522)||(10895235-10895420)
chr5 (342-519)||(1566052-1566230)
chr5 (105-183)||(18333474-18333552)
chr5 (106-183)||(24487655-24487732)
chr5 (107-176)||(9368599-9368668)
chr5 (107-183)||(24528537-24528613)
chr5 (106-181)||(24346747-24346822)
chr5 (106-181)||(41666767-41666842)
chr5 (106-181)||(41667003-41667078)
chr5 (106-183)||(2063744-2063820)
chr5 (106-183)||(37656947-37657024)
chr5 (105-181)||(60086-60162)
chr5 (105-181)||(24346510-24346586)
chr5 (108-175)||(170563-170630)
chr5 (106-181)||(19705902-19705977)
chr5 (105-155)||(15480584-15480634)
chr5 (106-183)||(15480319-15480396)
chr5 (106-155)||(25258104-25258153)
chr5 (106-155)||(25258311-25258360)
chr5 (106-155)||(25321894-25321943)
chr5 (106-155)||(25322101-25322150)
chr5 (106-155)||(27133003-27133052)
chr5 (106-155)||(38731848-38731897)
[»] chr2 (23 HSPs)
chr2 (400-522)||(6103586-6103712)
chr2 (114-172)||(5206706-5206764)
chr2 (106-181)||(14466420-14466495)
chr2 (106-183)||(16419499-16419576)
chr2 (106-181)||(2029768-2029843)
chr2 (106-181)||(2030003-2030078)
chr2 (106-181)||(5711449-5711524)
chr2 (106-183)||(2324237-2324314)
chr2 (112-181)||(16533546-16533615)
chr2 (106-183)||(42639624-42639701)
chr2 (107-183)||(5509076-5509152)
chr2 (191-247)||(17993145-17993201)
chr2 (105-181)||(37840336-37840412)
chr2 (106-174)||(40379219-40379287)
chr2 (106-174)||(40379454-40379522)
chr2 (106-181)||(5711685-5711760)
chr2 (106-180)||(30006589-30006663)
chr2 (106-180)||(30063277-30063351)
chr2 (118-183)||(17525360-17525425)
chr2 (106-155)||(17854939-17854988)
chr2 (119-180)||(18208988-18209049)
chr2 (106-155)||(19191620-19191669)
chr2 (106-151)||(27897616-27897661)
[»] scaffold0758 (1 HSPs)
scaffold0758 (342-510)||(639-808)
[»] scaffold0092 (1 HSPs)
scaffold0092 (106-176)||(5659-5729)
[»] scaffold0519 (2 HSPs)
scaffold0519 (106-183)||(1913-1990)
scaffold0519 (106-181)||(2150-2225)
[»] scaffold0766 (1 HSPs)
scaffold0766 (106-183)||(6271-6348)
[»] scaffold0181 (1 HSPs)
scaffold0181 (106-183)||(20936-21013)
[»] scaffold0024 (1 HSPs)
scaffold0024 (105-150)||(89562-89607)
[»] scaffold0048 (1 HSPs)
scaffold0048 (106-150)||(81872-81916)
[»] scaffold0047 (1 HSPs)
scaffold0047 (105-155)||(12672-12722)
[»] scaffold0692 (1 HSPs)
scaffold0692 (106-183)||(5764-5841)
[»] scaffold0083 (1 HSPs)
scaffold0083 (119-176)||(51240-51297)


Alignment Details
Target: chr4 (Bit Score: 446; Significance: 0; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 191 - 761
Target Start/End: Complemental strand, 19125558 - 19124974
Alignment:
Q  191 atctagatgccgaaaagtgtcatggcaatggagaaggggcaaaccagagttgaaacacgatttgccgannnnnnnnnnctaaatggaggacagtggtcca 290  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||          ||||||||||||||||||||||    
T  19125558 atctagatgccgaaaagtgtcatggcaatggaggaggggcaaaccagagttgaaacatgatttgccgattttttttttctaaatggaggacagtggtcca 19125459  T
Q  291 tcgagtatgcacgatgtaggagttgtctctcaata--ggttctagataccatattgaataagagag---------ataagagagacatgagatgagaatt 379  Q
    ||| |||||||| ||||||||||||||||||||||  || |||||||||||| |||||||||||||         |||||||||||||||||||||||||    
T  19125458 tcgggtatgcacaatgtaggagttgtctctcaatataggctctagataccatgttgaataagagaggaaagagagataagagagacatgagatgagaatt 19125359  T
Q  380 gtgtgtcaaaatagcacaaggaagatttattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatatt 479  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19125358 gtgtgtcaaaatagcacaagaaagatttattatatagaagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacgtaatatt 19125259  T
Q  480 ctatcctaaataacttaaagagtaagctaaattttatttacaatggtattcattatttatttaaatatcaatacaaaccatacgaacaatcttcatcatt 579  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19125258 ctatcctaagtaacttaaagagtaagctaaaatatatttacaatggtattcattatttatttaaatatcaatacaaaccatacgaacaatcttcatcatt 19125159  T
Q  580 tggtttctactc---taagcacttgtgctcatggcatatgacttctctaaagcttgatcaagaccgtgttgcatcgggaggtcttgaagagtactctatc 676  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19125158 tggtttctactcttataagcacttgtgctcatggcatatgacttctctaaagcttgatcaagaccgtgttgcatcgggaggtcttgaagagtactctatc 19125059  T
Q  677 gaattgtggaattaatttgtccatgaatctaaaactttgatgtgttcctcatttgtcgtcatagctatgataccattattgggac 761  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19125058 gaattgtggaattaatttgtccatgaatctaaaactttgatgtgttcctcatttgtcgtcatagctatgataccattattgggac 19124974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 19125886 - 19125706
Alignment:
Q  13 cataggacaaaggagacaagcaaatataatgcaaaggggaaagacgatgatagcacaagtgaatgtaatgaagagctggattttgagtaggatgtggttg 112  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  19125886 cataagacaaaggagacaagcaagtataatgcaaaggggaaagacgatgataacacaagtgaatgtaatgaggagctggattttgagtaggatgtggttg 19125787  T
Q  113 ggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagacgatatttatc 193  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19125786 ggtcttacacaacctcacaaaaccggcttttaaggtgatgattacatccatttataaacacattttcagacgatatttatc 19125706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 333 - 524
Target Start/End: Original strand, 12005699 - 12005891
Alignment:
Q  333 gataccatattgaataagagagataagagagacatgagatgagaattgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagttta 431  Q
    |||||||| ||||||||||  || ||||||||| |  ||||| ||  ||||||   |||||||||| ||||||||||||||||| ||||||||||| |||    
T  12005699 gataccatgttgaataagaatgaaaagagagacttatgatgaaaaccgtgtgtatgaatagcacaacggaagatttattatataggagttaagtagctta 12005798  T
Q  432 gagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttatttacaatg 524  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||    
T  12005799 gagactaagctatgatatatttacagaatgaatattcaacataatattctatcctaagtaacttagagagtaagctaaaatatatttacaatg 12005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 505
Target Start/End: Original strand, 14169810 - 14170021
Alignment:
Q  295 gtatgcacgatgtaggagttgtctctcaataggttctagataccatattgaataagagagataagagagacatgagatgaga--attgtgtgtcaaaata 392  Q
    |||| |||| |||||| |||||||||||||||| |||||||||||| |||||| | ||||| |||||||||||  | ||| |  |  ||||| |  ||||    
T  14169810 gtattcacggtgtagg-gttgtctctcaataggctctagataccatgttgaatgacagagaaaagagagacatatgctgaaataaccgtgtgactgaata 14169908  T
Q  393 gcacaa-ggaagatttattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaata 491  Q
    |||| | ||||  | ||||||||| ||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  14169909 gcactacggaatgtctattatata-gagttaagtagcttggagactaagctatgatatatttacaaaataaatattctacataatattctatcctaattt 14170007  T
Q  492 acttaaagagtaag 505  Q
    ||||| ||| ||||    
T  14170008 acttagagaataag 14170021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 407 - 505
Target Start/End: Original strand, 14156364 - 14156461
Alignment:
Q  407 tattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaag 505  Q
    ||||||||| ||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| ||| ||||    
T  14156364 tattatata-gagttaagtagcttggagactaagctatgatatatttacaaaataaatattctacataatattctatcctaatttacttagagaataag 14156461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 446 - 521
Target Start/End: Original strand, 6727530 - 6727605
Alignment:
Q  446 atatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttatttaca 521  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| | ||||||||    
T  6727530 atatatttacagaatgaatattcaacataatattctatcctaagtaacttagagagtaagctaaaatatatttaca 6727605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 423 - 509
Target Start/End: Complemental strand, 19129511 - 19129426
Alignment:
Q  423 agtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaa 509  Q
    |||||| |||| |||||||||||||| ||||||| ||||||||||| |||||| |||||||| ||||||||||| ||||||||||||    
T  19129511 agtagtatagatactaaactatgatacatttacataatgaatattcaacataa-attctatcataaataacttagagagtaagctaa 19129426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 407 - 484
Target Start/End: Complemental strand, 6827342 - 6827266
Alignment:
Q  407 tattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatc 484  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  6827342 tattatataa-agttaagtagtttgaagactaaactatgatatatttacggaataaatattctacataatattctatc 6827266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 1965038 - 1964962
Alignment:
Q  26 agacaagcaaatataatgcaaaggggaaagacgatgatagcacaagtgaatgtaatgaagagctggattttgagtag 102  Q
    |||||||||| |||||||||||||||||||||||||||| || |||| ||||||||||  || ||||||| ||||||    
T  1965038 agacaagcaagtataatgcaaaggggaaagacgatgataacagaagtcaatgtaatgagaagatggatttcgagtag 1964962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 452 - 524
Target Start/End: Complemental strand, 40915638 - 40915566
Alignment:
Q  452 ttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttatttacaatg 524  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||| ||| ||||||| | | |||||||||||    
T  40915638 ttacaaaaggaatattctacataatattttatcctaagtaacttagagattaagctagaatatatttacaatg 40915566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 22845457 - 22845532
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||||  ||| ||||||||||||| ||||    
T  22845457 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacattgtcag 22845532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 35609500 - 35609567
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacac 173  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||||||| |  ||| ||||||||||    
T  35609500 gtggttgggtgttacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaacac 35609567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 36685885 - 36685960
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||| | |||||| |||||||| ||||||| |||||||||| ||  ||||||||||||||||| ||||    
T  36685885 gtggttgggtctaatacaaccccacaaaactgacttgtgaggtgaggataacccccatttataaacacattgtcag 36685960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 21646274 - 21646344
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacat 175  Q
    ||||||| ||||| ||||||| ||||||||| | ||||||||||||||||| |  ||||||||||||||||    
T  21646274 tgtggttaggtctaacacaacatcacaaaactggcttgtaaggtgaggattgcccccatttataaacacat 21646344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 22445527 - 22445477
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||||||||    
T  22445527 tgtggttgggtctaacacaaccccacaaaaccgacttgtagggtgaggatt 22445477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 9685472 - 9685423
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  9685472 gtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggatt 9685423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 400588 - 400652
Alignment:
Q  119 acacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||||||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||||    
T  400588 acacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaacacattgtcagac 400652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 35609722 - 35609770
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  35609722 tggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggatt 35609770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 12005482 - 12005528
Alignment:
Q  109 gttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  12005482 gttgggtctaacacaacctcacaaaaccggcttgtgaggtgaggatt 12005528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 56511172 - 56511109
Alignment:
Q  18 gacaaaggagacaagcaaatataatgcaaaggggaaagacgatgatagcacaagtgaatgtaatga 83  Q
    ||||||| ||| || |||||||||||||||||||||||||  ||||||||||||| ||||| ||||    
T  56511172 gacaaagaagaaaaacaaatataatgcaaaggggaaagac--tgatagcacaagtcaatgtgatga 56511109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 12720396 - 12720453
Alignment:
Q  310 gagttgtctctcaataggttctagataccatattgaataagagagataagagagacat 367  Q
    |||||| ||||||| ||| |||||||||||| |||| ||||||||| |||||||||||    
T  12720396 gagttgcctctcaaaaggctctagataccatgttgagtaagagagaaaagagagacat 12720453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 35796765 - 35796822
Alignment:
Q  119 acacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||||||||||||||||| ||||| ||||||||||| |  ||| |||||||||||||    
T  35796765 acacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 35796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 28245539 - 28245611
Alignment:
Q  109 gttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  28245539 gttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 28245611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 32002398 - 32002322
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatcca-tttataaacacattttca 180  Q
    |||| |||||||| | |||||||||||||||||| ||||||||||| |||| |  ||| ||||||||||||| ||||    
T  32002398 tgtgtttgggtctaatacaacctcacaaaaccgatttgtaaggtgaagattgcccccactttataaacacatgttca 32002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 21498869 - 21498794
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  21498869 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 21498794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 22863548 - 22863473
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| |||||  |||||||||| |  ||| ||||||||||||| ||||    
T  22863548 gtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaacacattgtcag 22863473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 35788733 - 35788658
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| || ||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  35788733 gtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 35788658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 35788968 - 35788893
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| || |||||||| |  ||| ||||||||||||| ||||    
T  35788968 gtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcag 35788893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 39902573 - 39902648
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||  ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  39902573 gtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacattgtcag 39902648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 40717451 - 40717526
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||||||| | ||||||||||| |  ||| ||||||||| ||| ||||    
T  40717451 gtggttgggcctaacacaaccccacaaaaccgacttttgaggtgaggattgcccccacttataaacaaattatcag 40717526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 44118869 - 44118944
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||| || ||| |||||||| |||||||| | ||||| |||||||||||||  ||| ||||||||||||| ||||    
T  44118869 gtggtgggctctaacacaaccccacaaaacgggcttgtgaggtgaggattacccccacttataaacacattgtcag 44118944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 53814939 - 53815014
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||  | |||||||| |||||||||||||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  53814939 gtggttgggcttaacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaacaaattgtcag 53815014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 52559640 - 52559566
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||| || |||||||| |||||||||| ||||| |||||| |||| |  ||| ||||||||||||| ||||    
T  52559640 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcag 52559566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 18528467 - 18528516
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    |||||||||||| ||| || ||||||||||||| |||| |||||||||||    
T  18528467 gtggttgggtctaacaaaatctcacaaaaccgatttgtgaggtgaggatt 18528516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 22231318 - 22231367
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  22231318 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 22231367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 27464272 - 27464325
Alignment:
Q  120 cacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacac 173  Q
    ||||||| |||||||||| ||||| ||||||||||| | |||| ||||||||||    
T  27464272 cacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaacac 27464325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 35175111 - 35175034
Alignment:
Q  104 atgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||||| || ||||||||  |||||| |||||||| |||||| ||||||  ||  ||||||||||||| ||||    
T  35175111 atgtggttgggcctaacacaaccctacaaaatcgacttgtgaggtgatgattaccccctcttataaacacattgtcag 35175034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 53559300 - 53559349
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| ||||||| || |||||||||||||||||    
T  53559300 gtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggatt 53559349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 5e-49; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 333 - 522
Target Start/End: Original strand, 21505208 - 21505399
Alignment:
Q  333 gataccatattgaataa-gagagataagagagacatgagatgagaattgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagttt 430  Q
    |||||||| |||||||| |||||| |||||||||||  ||||| || ||||||||  |||||||||| ||||| ||||||||||| ||||||||||| ||    
T  21505208 gataccatgttgaataaagagagaaaagagagacatatgatgaaaactgtgtgtcttaatagcacaacggaaggtttattatataggagttaagtagctt 21505307  T
Q  431 agagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttatttacaa 522  Q
    ||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  21505308 agagactaagctaggatatatttacataatgactattctacataatattctatcctaagtaacttagagagtaagctaaaatatatttacaa 21505399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 407 - 488
Target Start/End: Complemental strand, 10122906 - 10122826
Alignment:
Q  407 tattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaa 488  Q
    ||||||||| ||||||||||| || |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  10122906 tattatata-gagttaagtagcttggagactaagctatgatatatttacagaataaatattctacataatattctatcctaa 10122826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 401 - 519
Target Start/End: Complemental strand, 23520759 - 23520642
Alignment:
Q  401 aagatttattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaaga 500  Q
    |||||||||||||||  ||| |||||  |||| | |||| ||||||||||||||||||||||||||||  ||||||||| |||||||| ||||||| |||    
T  23520759 aagatttattatatagaagt-aagtaccttagggcctaagctatgatatatttacaaaatgaatattcatcataatattatatcctaagtaacttagaga 23520661  T
Q  501 gtaagctaaattttattta 519  Q
    |||| ||||| | ||||||    
T  23520660 gtaaactaaaatatattta 23520642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 399 - 522
Target Start/End: Original strand, 38076186 - 38076310
Alignment:
Q  399 ggaagatttattatataagagttaagtagtttagagactaaactatgatatatttac-aaaatgaatattctacataatattctatcctaaataacttaa 497  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||||  ||| |||||| |||  |||||||  |||||||||| |||| ||| ||||||||    
T  38076186 ggaaggtttattatataggagttaagtagtttaaagactaaactagaatacatttactaaacggaatattagacataatattttatcttaagtaacttaa 38076285  T
Q  498 agagtaagctaaattttatttacaa 522  Q
    || ||||| |||  | |||||||||    
T  38076286 agtgtaagttaatatatatttacaa 38076310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 11232439 - 11232516
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||| |  ||| ||||||||||||| ||||||    
T  11232439 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcagac 11232516  T

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Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 11232204 - 11232279
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||| |  ||| ||||||||||||| ||||    
T  11232204 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 11232279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 407 - 474
Target Start/End: Original strand, 42776864 - 42776931
Alignment:
Q  407 tattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacata 474  Q
    |||||||||  ||||||| ||||||||||| | || || |||||||||||||||||||||||||||||    
T  42776864 tattatatagaagttaaggagtttagagacgagacaataatatatttacaaaatgaatattctacata 42776931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 407 - 505
Target Start/End: Complemental strand, 11179506 - 11179409
Alignment:
Q  407 tattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaag 505  Q
    ||||||||| ||||||||||  || ||||| || |||||||||||||| | ||| |||||||||||||||||| |||||||| | ||||| ||| ||||    
T  11179506 tattatata-gagttaagtaacttggagaccaagctatgatatatttagagaataaatattctacataatattttatcctaatttacttagagaataag 11179409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 16050103 - 16050028
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||| |||||||| |||||||| ||||||| ||||||||||| | | || ||||||||| ||| ||||    
T  16050103 gtggttgggtctaacacaaccccacaaaactgacttgtgaggtgaggattgccttcacttataaacaaattatcag 16050028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 5590377 - 5590455
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||| || ||||||||||||||||||| ||||| | ||||||||| |  ||| || |||||||||| ||||||    
T  5590377 tgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacattgtcagac 5590455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 39052942 - 39053014
Alignment:
Q  109 gttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  39052942 gttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 39053014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 4828368 - 4828301
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaaca 172  Q
    |||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| |||||||||    
T  4828368 tgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 4828301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 5931959 - 5932034
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || ||| |||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  5931959 gtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 5932034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 6559458 - 6559525
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaaca 172  Q
    |||||||||| |  ||| ||||||||||||||| ||||||||||||||||| |  ||| |||||||||    
T  6559458 tgtggttgggacgaacataacctcacaaaaccggcttgtaaggtgaggattgcccccacttataaaca 6559525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 8929091 - 8929016
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||| ||||| |  ||| ||||||||||||| ||||    
T  8929091 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggattgcccccagttataaacacattgtcag 8929016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 19256596 - 19256671
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  19256596 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 19256671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 35682791 - 35682866
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||  ||||||||||| |  ||| ||||||||||||| ||||    
T  35682791 gtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaacacattgtcag 35682866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 45031373 - 45031420
Alignment:
Q  108 ggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||| || ||||||||| ||||||||| |||||||||||||||||    
T  45031373 ggttgggcctaacacaaccttacaaaaccggcttgtaaggtgaggatt 45031420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 18004107 - 18004181
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||| || ||||||||||||||||||||||| |  |||||||||| |  ||| ||||||||| ||| ||||    
T  18004107 tggttgggcctaacacaacctcacaaaaccgacttatggggtgaggattgcccccacttataaacatattgtcag 18004181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 20301335 - 20301265
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||||||| || ||||||||||||||||| | ||||| |||| |||||| |  ||| |||||||||||||    
T  20301335 gtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 20301265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 21087967 - 21087897
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||||||| || ||||||||||||||||| | ||||| |||| |||||| |  ||| |||||||||||||    
T  21087967 gtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 21087897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 24075316 - 24075382
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaaca 172  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| |||||||||    
T  24075316 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 24075382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 24532432 - 24532506
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||| || |||||||| |||||||||| ||||| |||||| |||| |  ||| ||||||||||||| ||||    
T  24532432 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcag 24532506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 38447450 - 38447512
Alignment:
Q  119 acacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  38447450 acacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 38447512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 4828142 - 4828093
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  4828142 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 4828093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 39960266 - 39960217
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  39960266 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 39960217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 42846615 - 42846664
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  42846615 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 42846664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 45031164 - 45031225
Alignment:
Q  108 ggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataa 169  Q
    ||||||| || || |||||| ||||||||| |||| |||||||||||||| |||| ||||||    
T  45031164 ggttgggcctaactcaaccttacaaaaccggcttgaaaggtgaggattacctccacttataa 45031225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 3e-38; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 312 - 519
Target Start/End: Complemental strand, 55252532 - 55252324
Alignment:
Q  312 gttgtctctcaataggttctagataccatattgaataagagagataagagagacatgagatgaga-attgtgtgtcaaaatagcacaa-ggaagatttat 409  Q
    |||||||||||| ||| |||||||||||| |||||||||||||| |||||||||||  ||||| | |  |||||||  |||||||||| |||||||||||    
T  55252532 gttgtctctcaaaaggctctagataccatgttgaataagagagaaaagagagacatatgatgaaataccgtgtgtctgaatagcacaacggaagatttat 55252433  T
Q  410 tatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaa 509  Q
    ||||||  ||| |||||| || | | |||| |||||||||||||||| |||||||||||  ||||||||| |||||||| ||||||| ||||||||||||    
T  55252432 tatatagaagt-aagtagcttggggcctaagctatgatatatttacagaatgaatattcatcataatattatatcctaagtaacttagagagtaagctaa 55252334  T
Q  510 attttattta 519  Q
    | | ||||||    
T  55252333 aatatattta 55252324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 333 - 479
Target Start/End: Original strand, 14170297 - 14170445
Alignment:
Q  333 gataccatattgaataagagagataagagagacatgagatgaga-attgtgtgtcaaaatagcacaaggaa-gatttattatataagagttaagtagttt 430  Q
    |||||||| || ||||| ||||| |||||||||||| ||||| | ||| |||| |  |||||||||| ||| |||||||||||||| ||| |||||| ||    
T  14170297 gataccatgttaaataaaagagaaaagagagacatgtgatgaaatattatgtgactgaatagcacaacgaaagatttattatataaaagtaaagtagctt 14170396  T
Q  431 agagactaaactatgatatatttacaaaatgaatattctacataatatt 479  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  14170397 agagactaagctatgatatatttacagaatgaatattcaacataatatt 14170445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 55256541 - 55256363
Alignment:
Q  342 ttgaataagagagataagagagacatgagatgaga-attgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaa 439  Q
    |||||||||||||| |||||||||||  ||||| | |  |||||||  |||||||||| |||||||||||||||||  ||| |||||| || | | ||||    
T  55256541 ttgaataagagagaaaagagagacatatgatgaaataccgtgtgtctgaatagcacaacggaagatttattatatagaagt-aagtagcttggggcctaa 55256443  T
Q  440 actatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttattta 519  Q
     |||||||||||||||| |||||||||||  ||||||||| |||||||| ||||||| ||||||||||||| | ||||||    
T  55256442 gctatgatatatttacacaatgaatattcatcataatattatatcctaagtaacttagagagtaagctaaaatatattta 55256363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 55254872 - 55254783
Alignment:
Q  18 gacaaaggagacaagcaaatataatgcaaaggggaaagacgatgatagcacaagtgaatgtaatgaagagctggattttgagtaggatgt 107  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||||| |||||||||||    
T  55254872 gacaaagaagacaagcaagtataatgcaagggggaaagacgatgatagcacaagtcaatgtaatgaggagatggatttcgagtaggatgt 55254783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 522
Target Start/End: Original strand, 6028878 - 6029024
Alignment:
Q  377 attgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataa 475  Q
    ||||||||||  |||||||| | ||||||||||||| ||| |||||||  | |||| ||||||||||| |||||||||||||||  ||||||||| ||||    
T  6028878 attgtgtgtctgaatagcactacggaagatttattacataggagttaatgaatttaaagactaaactaggatatatttacaaaagaaatattctaaataa 6028977  T
Q  476 tattctatcctaaataacttaaagagtaagctaaattttatttacaa 522  Q
    ||||||||  ||| ||||||| |||| ||| |||| | |||||||||    
T  6028978 tattctatgttaagtaacttagagagcaaggtaaaatatatttacaa 6029024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 8019043 - 8018967
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||| || |||||||| |||||||||| ||||| ||||||||||| || ||| ||||||||| ||||||||    
T  8019043 tgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcacccacttataaacaaattttcag 8018967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 54368590 - 54368515
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||| |||||||| || ||||||| ||||| ||||||||||| |  ||| ||||||||||||||||||    
T  54368590 gtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacattttcag 54368515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 34610636 - 34610586
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  34610636 tgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggatt 34610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 45138981 - 45139030
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  45138981 gtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggatt 45139030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 1800291 - 1800240
Alignment:
Q  104 atgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||||||||||||||||| ||||||||||  |||| |||||||||||    
T  1800291 atgtggttgggtcttacacaaccccacaaaaccggtttgtgaggtgaggatt 1800240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 35038204 - 35038279
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  35038204 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacattgtcag 35038279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 54567966 - 54567891
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  54567966 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacattgtcag 54567891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 22729175 - 22729097
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||| || ||||||||||||||||||| ||||| | ||||||||| |  ||| || |||||||||| ||||||    
T  22729175 tgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacattgtcagac 22729097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 45138812 - 45138882
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    |||||||||||| | |||||| |||||||||| ||||| ||||||||||| |  ||| |||||||||||||    
T  45138812 gtggttgggtctcatacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 45138882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 1681766 - 1681710
Alignment:
Q  119 acacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacat 175  Q
    ||||||||||||||||||| |||||  ||||| ||||||| ||| ||||||||||||    
T  1681766 acacaacctcacaaaaccggcttgtggggtgatgattacacccacttataaacacat 1681710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 8142429 - 8142481
Alignment:
Q  118 tacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaa 170  Q
    |||||||||||||||||||| ||||| ||||||||||| | || |||||||||    
T  8142429 tacacaacctcacaaaaccggcttgtgaggtgaggattgcctctatttataaa 8142481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 50930771 - 50930707
Alignment:
Q  111 tgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacat 175  Q
    |||||||||||||||| ||||||||||  |||| ||||||||||| |  ||| ||||||||||||    
T  50930771 tgggtcttacacaaccccacaaaaccgttttgtgaggtgaggattgcccccacttataaacacat 50930707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 1723086 - 1723161
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  1723086 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 1723161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 6487343 - 6487418
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || | |||||| || ||||||| ||||| ||||||||||||| |||| ||||||||| ||| ||||    
T  6487343 gtggttgggcctaaaacaaccccataaaaccggcttgtgaggtgaggattacctccacttataaacaaattgtcag 6487418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 11589859 - 11589784
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  11589859 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 11589784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 14839745 - 14839796
Alignment:
Q  104 atgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| |||| ||||||||  ||||||||||||||||| |||||||||    
T  14839745 atgtggttgagtctaacacaaccatacaaaaccgacttgtaacgtgaggatt 14839796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 20327624 - 20327699
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||| ||||| ||||    
T  20327624 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacattgtcag 20327699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 21717358 - 21717401
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggt 148  Q
    |||||||||| |  ||||||||||||||||||||||||||||||    
T  21717358 tgtggttgggccgaacacaacctcacaaaaccgacttgtaaggt 21717401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 35038438 - 35038513
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||  ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  35038438 gtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgcccccacttataaacacattgtcag 35038513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 49629675 - 49629604
Alignment:
Q  110 ttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||| |||||||| ||||||||||  |||| ||||| ||||| |  ||| ||||||||||||||||||    
T  49629675 ttgggtctaacacaaccccacaaaaccggtttgtgaggtggggattgccgccacttataaacacattttcag 49629604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 13574930 - 13575000
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacat 175  Q
    |||||||||| || |||||||| |||||||| | ||||| ||||||||||| |  ||| ||||||||||||    
T  13574930 tgtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggatttcccccacttataaacacat 13575000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 13741110 - 13741160
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||||||| |||||||| || ||||||| ||||| |||||||||||    
T  13741110 tgtggttgggtctaacacaaccccaaaaaaccggcttgtgaggtgaggatt 13741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 16926972 - 16927034
Alignment:
Q  119 acacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||| |||||||||| ||||| || ||||||||||  ||| ||||||||||||| ||||    
T  16926972 acacaaccccacaaaaccggcttgtgagatgaggattacccccacttataaacacattgtcag 16927034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 20327860 - 20327934
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  20327860 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 20327934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 45828094 - 45828044
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    |||||| ||| || ||||||||||||||||||| ||||| |||||||||||    
T  45828094 tgtggtagggcctaacacaacctcacaaaaccggcttgtgaggtgaggatt 45828044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 23691216 - 23691277
Alignment:
Q  120 cacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  23691216 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 23691277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 23708016 - 23708077
Alignment:
Q  120 cacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  23708016 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 23708077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 23726472 - 23726533
Alignment:
Q  120 cacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  23726472 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 23726533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 23744928 - 23744989
Alignment:
Q  120 cacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  23744928 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 23744989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 24063453 - 24063514
Alignment:
Q  120 cacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  24063453 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 24063514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 24866271 - 24866222
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  24866271 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 24866222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 4e-37; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 355 - 521
Target Start/End: Original strand, 18282175 - 18282341
Alignment:
Q  355 ataagagagacatgagatgagaattgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaaactatgatatattt 453  Q
    |||||||||||||  ||||| ||  |||| || ||||||||||| ||||||||||||||||| |||| |||||| ||||||||||| |||||||||||||    
T  18282175 ataagagagacatacgatgaaaaccgtgtatctaaatagcacaacggaagatttattatataggagt-aagtagcttagagactaagctatgatatattt 18282273  T
Q  454 acaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttatttaca 521  Q
    | | ||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||| | ||||||||    
T  18282274 atagaataaatattcaacataatattctatcctaagtaacttagagagtaagctaaaatatatttaca 18282341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 4885268 - 4885090
Alignment:
Q  342 ttgaataagagagataagagagacatgagatgaga-attgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaa 439  Q
    |||||||||||||| |||||||||||  ||||| | |  |||||||  |||||||||| ||||||||||||||||   ||| |||||| || | | ||||    
T  4885268 ttgaataagagagaaaagagagacatatgatgaaataccgtgtgtctgaatagcacaacggaagatttattatattgaagt-aagtagcttggggcctaa 4885170  T
Q  440 actatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttattta 519  Q
     |||||||||||||||| |||||||||||  ||||||||| |||||||| ||||||| ||||||||||||| | ||||||    
T  4885169 gctatgatatatttacagaatgaatattcatcataatattatatcctaagtaacttagagagtaagctaaaatatattta 4885090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 31440078 - 31439900
Alignment:
Q  342 ttgaataagagagataagagagacatgagatgaga-attgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaa 439  Q
    |||||||||||||| |||| ||||||  ||||| | |  ||||||| ||||||||||| |||||||||||||||||  ||| |||||| |||| |  |||    
T  31440078 ttgaataagagagaaaagaaagacatatgatgaaataccgtgtgtctaaatagcacaacggaagatttattatatagaagt-aagtagcttagggcttaa 31439980  T
Q  440 actatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttattta 519  Q
     |||||||||||||||| |||||||||||  ||||||||| |||||||| |||||||   ||||||||||| | ||||||    
T  31439979 gctatgatatatttacataatgaatattcatcataatattatatcctaagtaacttaggaagtaagctaaaatatattta 31439900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 6400630 - 6400705
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||| |||||||| |||||||||||||||| | ||||||||| | |||| ||||||||||||| ||||    
T  6400630 gtggttgggtctaacacaaccccacaaaaccgacttgtgatgtgaggattgcctccacttataaacacattgtcag 6400705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 2753331 - 2753256
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcaga 182  Q
    |||||||| || |||||||| |||||||||| ||||| |||||||||||||  ||| ||||||||||||| |||||    
T  2753331 tggttgggcctaacacaaccccacaaaaccgccttgtgaggtgaggattacccccacttataaacacattgtcaga 2753256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 13353275 - 13353200
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||| |  ||| ||||||||||||| ||||    
T  13353275 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 13353200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 33796400 - 33796325
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||| |  ||| ||||||||||||| ||||    
T  33796400 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 33796325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 9705328 - 9705258
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    |||||||||||| |||||||| |||||||||| ||||| ||||||||||| |  ||| |||||||||||||    
T  9705328 gtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 9705258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 12330189 - 12330266
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || ||||||||||||||||||| ||||| |||||||| || |  ||| ||||||||||||| ||||||    
T  12330189 gtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataaacacattgtcagac 12330266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 4868587 - 4868662
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  4868587 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 4868662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 422 - 501
Target Start/End: Original strand, 9210528 - 9210607
Alignment:
Q  422 aagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagag 501  Q
    |||||| ||||||||||| ||||| |||||||||| ||| |||||| |||| |||||||||| |||| ||  ||||||||    
T  9210528 aagtagcttagagactaagctatgctatatttacagaataaatattttacacaatattctattctaattattttaaagag 9210607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 9705094 - 9705019
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||||||||| |||||| |||| |  ||| ||||||||||||| ||||    
T  9705094 gtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgatgattgcccccacttataaacacattgtcag 9705019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 4868823 - 4868893
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| |||||||||||||    
T  4868823 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 4868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 16570232 - 16570158
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||| || |||||||| |||||||||||||||| | |||||||||||  ||  ||||||||||||| ||||    
T  16570232 tggttgggcctaacacaaccccacaaaaccgacttgttacgtgaggattacccccgcttataaacacattgtcag 16570158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 33494613 - 33494539
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttca 180  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| |||||||    
T  33494613 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatattttca 33494539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 6542953 - 6543030
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||||| |||||||| |||||||||| ||| | |||||| |||| |  ||| ||||||||||||| ||||||    
T  6542953 gtggttgggtctaacacaaccccacaaaaccggcttctgaggtgatgattgcccccacttataaacacattgtcagac 6543030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 12330301 - 12330377
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || ||||||||||||||||||| ||||| || |||||||| |  ||| ||||||||||||| ||||||    
T  12330301 gtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggattgc-cccacttataaacacattgtcagac 12330377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 13740755 - 13740678
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||| | || ||||||||||||||||||||||| | ||| |||||||   |||| ||||||||||||| ||||||    
T  13740755 gtggttgagcctaacacaacctcacaaaaccgacttatgaggcgaggattgtctccacttataaacacattgtcagac 13740678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 13746255 - 13746178
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||| | || ||||||||||||||||||||||| | ||| |||||||   |||| ||||||||||||| ||||||    
T  13746255 gtggttgagcctaacacaacctcacaaaaccgacttatgaggcgaggattgtctccacttataaacacattgtcagac 13746178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 5572394 - 5572442
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggat 154  Q
    ||||||||| || |||||||| |||||||||||||||| ||||||||||    
T  5572394 gtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggat 5572442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 13740991 - 13740915
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||| || |||||||| |||||||||||||||| | ||||||||| |  ||| ||||||||| ||| ||||    
T  13740991 tgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcccacttataaacaaattgtcag 13740915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 13746491 - 13746415
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||| || |||||||| |||||||||||||||| | ||||||||| |  ||| ||||||||| ||| ||||    
T  13746491 tgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcccacttataaacaaattgtcag 13746415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 27656533 - 27656457
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  27656533 tgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacaaattgtcag 27656457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 6066050 - 6065974
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||| || |||||||| ||||||||| |||||| ||||||||||| |  ||  ||||||||||||| ||||||    
T  6066050 tgtggttgggcctaacacaaccccacaaaaccaacttgtcaggtgaggattgc--ccccttataaacacattgtcagac 6065974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 8026463 - 8026388
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  8026463 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 8026388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 27653291 - 27653216
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||| | |||||||||||||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  27653291 gtggttgggcctaacacaatcccacaaaaccgacttgtgaggtgaggatttcccccacttataaacaaattgtcag 27653216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 3680087 - 3680009
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||| || |||||||| ||||||| |||||||| ||  ||||||| |  ||| ||||||||||||| ||||||    
T  3680087 tgtggttgggcctaacacaaccccacaaaatcgacttgtgagaggaggattgcccccagttataaacacattgtcagac 3680009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 12329954 - 12330024
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||||||| || |||||||||||||||| |  ||||| ||||||||||| |  ||| |||||||||||||    
T  12329954 gtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaacacatt 12330024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 6623420 - 6623469
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||  || |||||||| |||||||||| |||||||||||||||||    
T  6623420 gtggttggacctaacacaaccccacaaaaccggcttgtaaggtgaggatt 6623469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 8026678 - 8026629
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  8026678 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 8026629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 10145525 - 10145594
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacat 175  Q
    |||||||| | | ||||||  ||||||||||| ||||| |||| |||||| | |||||||||||||||||    
T  10145525 gtggttggatttaacacaatttcacaaaaccggcttgtgaggttaggattgcttccatttataaacacat 10145594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 30256886 - 30256837
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  30256886 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 30256837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 3e-35; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 312 - 519
Target Start/End: Original strand, 41492528 - 41492735
Alignment:
Q  312 gttgtctctcaataggttctagataccatattgaataagagagataagagagacatgagatgagaattgtgtgtcaaaatagcacaag-gaagatttatt 410  Q
    |||||||||||| ||| |||||||||||| |||||||||||||| |||||||||||  |||||  |  |||||||  ||||||||||  |||||||||||    
T  41492528 gttgtctctcaaaaggctctagataccatgttgaataagagagaaaagagagacatatgatgaataccgtgtgtctgaatagcacaactgaagatttatt 41492627  T
Q  411 atataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaa 510  Q
    |||||  ||| |||||| || | | |||| |||||||||||||||| |||||||||||  ||||||||| |||||||| ||||||| || ||||||||||    
T  41492628 atatagaagt-aagtagctttgggcctaagctatgatatatttacagaatgaatattcatcataatattatatcctaagtaacttagagtgtaagctaaa 41492726  T
Q  511 ttttattta 519  Q
     | ||||||    
T  41492727 atatattta 41492735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 41488294 - 41488471
Alignment:
Q  342 ttgaataagagagataagagagacatgagatgagaattgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaaa 440  Q
    |||||||||||||| |||||||||||  |||||  |  |||||||  |||||||||| |||||||||||||||||  ||| |||||| |||| | ||||     
T  41488294 ttgaataagagagaaaagagagacatatgatgaataccgtgtgtctgaatagcacaacggaagatttattatatagaagt-aagtagcttagggcctaag 41488392  T
Q  441 ctatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttattta 519  Q
    ||||||||| |||||| |||||||||||  ||||||||| |||||||| ||||||| || |||||||||| | ||||||    
T  41488393 ctatgatatgtttacagaatgaatattcatcataatattatatcctaagtaacttagagtgtaagctaaaatatattta 41488471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 41490073 - 41490159
Alignment:
Q  18 gacaaaggagacaagcaaatataatgcaaaggggaaagacgatgatagcacaagtgaatgtaatgaagagctggattttgagtagga 104  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| |||||||| |||||||||| ||| ||||||| ||||||||    
T  41490073 gacaaaggagacaagcaagtataatgcaagggggaaagacgatgattgcacaagtcaatgtaatgaggagatggatttcgagtagga 41490159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 16457149 - 16456972
Alignment:
Q  342 ttgaataagagagataagagagacatgagatgagaattgtgtgtcaaaatagcacaag-gaagatttattatataagagttaagtagtttagagactaaa 440  Q
    |||||||||||||| |||||||||||  |||||  |  |||||||  ||||||||||  ||||||||||||||||  ||| | |||| |||| | ||||     
T  16457149 ttgaataagagagaaaagagagacatatgatgaataccgtgtgtctgaatagcacaacagaagatttattatatagaagt-aggtagcttagggcctaag 16457051  T
Q  441 ctatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttattta 519  Q
    |||||||||||||| | |||||||||||  ||||||||| |||||||| ||||||| |||| |||||||| | ||||||    
T  16457050 ctatgatatatttatagaatgaatattcgtcataatattatatcctaagtaacttagagagcaagctaaaatatattta 16456972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 295 - 488
Target Start/End: Original strand, 45438168 - 45438360
Alignment:
Q  295 gtatgcacgatgtaggagttgtctctcaataggttctagataccatattgaataagagagataagagagacatgagatgagaattgtgtgtcaaaatagc 394  Q
    |||| |||| |||||| |||||||||||||||| |||||||||||| |||||| | ||||| |||||| | |||     | ||   |||| |  ||||||    
T  45438168 gtattcacggtgtagg-gttgtctctcaataggctctagataccatgttgaatgacagagaaaagagacatatgctgaaataaccatgtgactgaatagc 45438266  T
Q  395 acaa-ggaagatttattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaa 488  Q
    || | |||| || ||||||||| ||||||||||| || ||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  45438267 actacggaatatctattatata-gagttaagtagcttggagactaagttatgatatatttacagaataaatattctacataatattctatcctaa 45438360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 399 - 488
Target Start/End: Original strand, 29805962 - 29806051
Alignment:
Q  399 ggaagatttattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaa 488  Q
    |||||||||||||||||  |||||||||||||||||||||| ||| |||||||||||| || ||||||| || |||||||| ||| ||||    
T  29805962 ggaagatttattatatagaagttaagtagtttagagactaagctaggatatatttacagaaagaatattttaaataatattttatgctaa 29806051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 16478111 - 16478197
Alignment:
Q  18 gacaaaggagacaagcaaatataatgcaaaggggaaagacgatgatagcacaagtgaatgtaatgaagagctggattttgagtagga 104  Q
    ||||||| |||||||||| |||||||||||| ||||||| || |||| ||||||| ||||||||||  || ||||||||||||||||    
T  16478111 gacaaagaagacaagcaagtataatgcaaagtggaaagaagacgataacacaagtcaatgtaatgagaagatggattttgagtagga 16478197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 25145495 - 25145572
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| |  ||| | ||||||||||| ||||||    
T  25145495 gtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgcccccactaataaacacattgtcagac 25145572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 2859638 - 2859714
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||| || ||||||||||||||||||| ||||| |||||||||||||  ||| | ||||||||||| ||||||    
T  2859638 tggttggggctaacacaacctcacaaaaccggcttgtgaggtgaggattacccccactaataaacacattgtcagac 2859714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 52907458 - 52907374
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagacgatattt 190  Q
    ||||||||||||||||||||| |||||||||  ||||| ||||||||||| |  ||| |||||||||||| |||| || ||||||    
T  52907458 gtggttgggtcttacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttcaaaccatattt 52907374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 16475985 - 16476088
Alignment:
Q  376 aattgtgtgtcaaaatagcacaaggaagatttattatataagagttaa----gtagtttagagactaaactatgatatatttacaaaatgaatattctac 471  Q
    |||||||||||  |||||||  ||||| | |||||| |||||||||||    |||| ||| ||||||| |||||||||||||||| ||||||||||| ||    
T  16475985 aattgtgtgtctgaatagcatcaggaatacttattacataagagttaattaagtagcttaaagactaagctatgatatatttacataatgaatattcaac 16476084  T
Q  472 ataa 475  Q
    ||||    
T  16476085 ataa 16476088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 4113016 - 4113091
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  4113016 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 4113091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 409 - 501
Target Start/End: Original strand, 36274114 - 36274210
Alignment:
Q  409 ttatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaat----attctacataatattctatcctaaataacttaaagag 501  Q
    ||||||| ||||||||||||||||||| |||  ||  ||||||||||| || ||||    |||||||||||||||||||  ||||||||||| ||||    
T  36274114 ttatataggagttaagtagtttagagagtaagttagaatatatttacagaaggaatgttaattctacataatattctatgttaaataacttatagag 36274210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 39348129 - 39348204
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||| |||||||| |||| ||||| || ||||| |||||||| | |||| ||||||||||||| ||||    
T  39348129 gtggttgggtctaacacaaccccacagaaccggctggtaagttgaggattgcctccacttataaacacattgtcag 39348204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 40079226 - 40079151
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  40079226 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 40079151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 4098413 - 4098482
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||||||| || |||||||| ||||||||| |||||||||||||||||| |  ||| |||||||||||||    
T  4098413 gtggttgggcctaacacaacc-cacaaaaccaacttgtaaggtgaggattgcccccacttataaacacatt 4098482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 11924995 - 11924918
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || |||||||||||||||||||  |||||||||||| | |||  ||| ||||||||| ||| ||||||    
T  11924995 gtggttgggcctaacacaacctcacaaaaccggtttgtaaggtgagaaatacccccacttataaacatattgtcagac 11924918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 2859402 - 2859477
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || ||||||||||||| ||||| ||||| |||| |||||| |  ||| ||||||||||||| ||||    
T  2859402 gtggttgggcctaacacaacctcacagaaccggcttgtgaggtaaggattgcccccacttataaacacattgtcag 2859477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 5109559 - 5109488
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||| |||| || ||||||  |||||||||| |||||| |||||||||||||| | | |||||||||||||    
T  5109559 tgtggatgggcctaacacaatatcacaaaacccacttgtgaggtgaggattacaccgacttataaacacatt 5109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 17452689 - 17452764
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||| ||||| ||||    
T  17452689 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacattgtcag 17452764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 45433459 - 45433521
Alignment:
Q  407 tattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattcta 470  Q
    ||||||||| ||||||||||| || |||||||| ||||||||||||| || ||| |||||||||    
T  45433459 tattatata-gagttaagtagcttggagactaagctatgatatatttccagaataaatattcta 45433521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 369686 - 369632
Alignment:
Q  129 acaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||  ||||||||||||||||| |  ||| ||||||||||||||||||||    
T  369686 acaaaaccatcttgtaaggtgaggattgcccccacttataaacacattttcagac 369632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 27413643 - 27413581
Alignment:
Q  119 acacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||||| |||||||| |||| ||||||||||| | |||| ||||||||| ||| ||||    
T  27413643 acacaacctcataaaaccgatttgtgaggtgaggattgcctccacttataaacatattgtcag 27413581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 38668430 - 38668364
Alignment:
Q  110 ttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||| || |||||| | ||||||||||||||||||||||| |||| |  ||| |||||||||||||    
T  38668430 ttgggcctaacacaatcccacaaaaccgacttgtaaggtgatgattgcccccacttataaacacatt 38668364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 40316060 - 40316109
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    |||||||| ||| ||||||||||||||||||| ||| | |||||||||||    
T  40316060 gtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggatt 40316109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 51589066 - 51589017
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  51589066 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 51589017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 52650782 - 52650851
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    |||||||| || |||||||| |||||||||  ||||| ||||||||||| |  ||| |||||||||||||    
T  52650782 tggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacatt 52650851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 6e-33; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 389 - 520
Target Start/End: Original strand, 41388140 - 41388272
Alignment:
Q  389 aatagcacaa-ggaagatttattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatccta 487  Q
    |||||||||| ||||||||||||||| | |||| |||||| ||||||||||| ||||||||| |||||| |||| |||||| ||||||||||||||||||    
T  41388140 aatagcacaacggaagatttattataaaggagtaaagtagcttagagactaagctatgatatgtttacagaatggatattcaacataatattctatccta 41388239  T
Q  488 aataacttaaagagtaagctaaattttatttac 520  Q
    | ||||||| ||||||||||||| | |||||||    
T  41388240 agtaacttagagagtaagctaaaatatatttac 41388272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 26239925 - 26240003
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||||||| |||||||| ||||| |||||||||| ||||||||||| |  ||| ||||||||||||| ||||||    
T  26239925 tgtggttgggtctaacacaaccccacaataccgacttgtgaggtgaggattgcccccacttataaacacattgtcagac 26240003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 42985134 - 42985203
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    |||||| |||| |||||||||||||||| |||||||| ||||||||||| | |||| |||||||||||||    
T  42985134 tggttgagtctaacacaacctcacaaaatcgacttgtgaggtgaggattgcctccacttataaacacatt 42985203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 29469679 - 29469604
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||| |  ||| ||||||||||||| ||||    
T  29469679 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 29469604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 48243448 - 48243522
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||||| |||||||| |||||||||| |||||||| |||||||| |  ||| ||||||||||||| ||||    
T  48243448 tggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaacacattgtcag 48243522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 48243071 - 48243148
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||||    
T  48243071 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 48243148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 2544457 - 2544532
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||||||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  2544457 gtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaacaaattgtcag 2544532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 21861603 - 21861528
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| ||||||| || ||||||||||||||||| |  ||| ||||||||||||| ||||    
T  21861603 gtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataaacacattgtcag 21861528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 25620210 - 25620135
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  25620210 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 25620135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 29469914 - 29469839
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||  |||||||||| ||||||||||||||||| |  ||| ||||||||||||| ||||    
T  29469914 gtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 29469839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 36277236 - 36277311
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| ||||||| |||||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  36277236 gtggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaacacattgtcag 36277311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 48661565 - 48661614
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    |||||||||||| |||||| |||||||||||| ||||| |||||||||||    
T  48661565 gtggttgggtctaacacaatctcacaaaaccggcttgtgaggtgaggatt 48661614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 26028972 - 26029020
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||||| |||||||||||||||| || ||||| |||||||||||    
T  26028972 tggttgggtctaacacaacctcacaaaatcggcttgtgaggtgaggatt 26029020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 1596903 - 1596832
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    |||||||||| || ||||||||  ||||||||| ||||||||||||||||| |  ||| ||||||| |||||    
T  1596903 tgtggttgggcctaacacaaccctacaaaaccggcttgtaaggtgaggattgcccccacttataaaaacatt 1596832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 21054963 - 21055038
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  21054963 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatattgtcag 21055038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 21861368 - 21861293
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||| | |||||||||| ||||||||||||||||| |   || ||||||||||||| ||||    
T  21861368 gtggttgggcctaacacaatcccacaaaaccggcttgtaaggtgaggattgccctcacttataaacacattgtcag 21861293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 34027467 - 34027392
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||    
T  34027467 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 34027392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 4507003 - 4506957
Alignment:
Q  109 gttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| |||||||| || ||||||||||||| |||||||||||    
T  4507003 gttgggtctaacacaaccccataaaaccgacttgtgaggtgaggatt 4506957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 405 - 519
Target Start/End: Original strand, 20186794 - 20186908
Alignment:
Q  405 tttattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaa 504  Q
    |||| |||||| |||||||||||||||||||||||  ||  ||||||||||  || ||| | |||| |||| ||| ||| |||| |||| || ||||||     
T  20186794 tttactatataggagttaagtagtttagagactaagttagaatatatttacggaaggaacactctaaataacattttatgctaagtaacctagagagtag 20186893  T
Q  505 gctaaattttattta 519  Q
    |||||| | ||||||    
T  20186894 gctaaaatatattta 20186908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 47710517 - 47710447
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||||||| || |||||||| |||||||| | ||||| ||||||||||| |  ||| |||||||||||||    
T  47710517 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacatt 47710447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 47722173 - 47722103
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    ||||||||| || |||||||| |||||||| | ||||| ||||||||||| |  ||| |||||||||||||    
T  47722173 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacatt 47722103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 3038095 - 3038164
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    |||||||| || |||||||| |||||||||| ||||| | ||||||||| |  ||| |||||||||||||    
T  3038095 tggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaacacatt 3038164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 6782935 - 6782886
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||| | || |||||||| |||||||||| |||||||||||||||||    
T  6782935 gtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaggatt 6782886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 23839100 - 23839153
Alignment:
Q  119 acacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaaca 172  Q
    ||||||||||||||||||| ||||| ||||||||||| |  ||| |||||||||    
T  23839100 acacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaaca 23839153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 6e-27; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 345 - 521
Target Start/End: Original strand, 19763996 - 19764171
Alignment:
Q  345 aataagagagataagagagacatgagatgagaattgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaaacta 443  Q
    ||||||||||| |||||||| ||  ||||| ||| |||| | ||  |||||||| ||||||||||||||||| |||| |||||| ||||||||||| |||    
T  19763996 aataagagagaaaagagagatatatgatgaaaatcgtgtctgaa--tagcacaacggaagatttattatatacgagtaaagtagcttagagactaagcta 19764093  T
Q  444 tgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttatttaca 521  Q
    ||||||||||  | ||||| ||||| |||||||||| |||||||| ||||||  ||||||| ||||| | ||||||||    
T  19764094 tgatatatttgtagaatgattattcaacataatattatatcctaagtaacttggagagtaaactaaaatatatttaca 19764171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 342 - 522
Target Start/End: Complemental strand, 10895420 - 10895235
Alignment:
Q  342 ttgaataagagagataagagagacatgagatgagaattgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaaa 440  Q
    |||||||||||||| |||||||||||  ||||| ||  ||  |||  |||||||| | ||||| | ||||||||| ||||||||||| |||||||||||     
T  10895420 ttgaataagagagaaaagagagacatatgatgaaaaccgtcagtctgaatagcactatggaaggtctattatataggagttaagtagcttagagactaag 10895321  T
Q  441 cta----tgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttatttacaa 522  Q
    |||    ||||||||||||| || |||||||||| |||||||||||| |||| ||||||| | ||||||||||| | |||||||||    
T  10895320 ctagctatgatatatttacagaacgaatattctaaataatattctatgctaagtaacttagaaagtaagctaaaatatatttacaa 10895235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 1566052 - 1566230
Alignment:
Q  342 ttgaataagagagataagagagacatgagatgaga-attgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaa 439  Q
    |||||||||||||| |||||||||||  ||||| | |  ||||||   |||||||||| |||||||||| |||||   ||| |||||| || | | ||||    
T  1566052 ttgaataagagagaaaagagagacatatgatgaaataccgtgtgtttgaatagcacaacggaagatttagtatattgaagt-aagtagcttggggcctaa 1566150  T
Q  440 actatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaattttattta 519  Q
     |||||||||||||||| |||||||||||  ||||||||| |||||||| ||||||| ||||||||||||| | ||||||    
T  1566151 gctatgatatatttacagaatgaatattcatcataatattatatcctaagtaacttagagagtaagctaaaatatattta 1566230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 18333474 - 18333552
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||| || |||||||| |||||||||| ||||| |||||||||||||  ||| ||||||||||||| ||||||    
T  18333474 tgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacattgtcagac 18333552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 24487655 - 24487732
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||  | ||||||||||||||||||| ||||| |||||||||||||  ||| ||||||||| ||||||||||    
T  24487655 gtggttgggcttaacacaacctcacaaaaccggcttgtgaggtgaggattacccccacttataaacatattttcagac 24487732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 9368668 - 9368599
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    |||||||| || |||||||| |||||||||| ||||| ||||||||||| | |||| |||||||||||||    
T  9368668 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaacacatt 9368599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 24528613 - 24528537
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||||    
T  24528613 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 24528537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 24346747 - 24346822
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||||| |||||||| |||||||||| ||||| ||||||| |||||  ||| ||||||| ||||| ||||    
T  24346747 gtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaatacattgtcag 24346822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 41666767 - 41666842
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  41666767 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 41666842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 41667003 - 41667078
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  41667003 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 41667078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 2063744 - 2063820
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || |||||||| |||||||||||||||| | ||||||||| |  ||| ||||||||||||| ||||||    
T  2063744 gtggttgggcctaacacaaccccacaaaaccgacttgtga-gtgaggattgcccccacttataaacacattgtcagac 2063820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 37656947 - 37657024
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || ||  |||| |||||||||||||||| |||| ||||||||  ||| ||||||||||||| ||||||    
T  37656947 gtggttgggcctaacttaaccccacaaaaccgacttgtgaggtaaggattacccccacttataaacacattgtcagac 37657024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 60162 - 60086
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||| |||||||| ||| |||| |||||||||| ||||| ||||||||||| |  ||| |||||||||||| |||||    
T  60162 tgtgattgggtctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatgttcag 60086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 24346510 - 24346586
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||| | || |||||||| || ||||||| ||||| |||||||||||||  ||| ||||||||||||| ||||    
T  24346510 tgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaacacattgtcag 24346586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 170563 - 170630
Alignment:
Q  108 ggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacat 175  Q
    ||||||| || ||||||||||||||||||| ||||| ||||||||| | |  ||| ||||||||||||    
T  170563 ggttgggcctaacacaacctcacaaaaccggcttgtgaggtgaggactgcccccacttataaacacat 170630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 19705977 - 19705902
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||  |||||||||| ||| ||||||||||||| |  ||| ||||||||||||| ||||    
T  19705977 gtggttgggcctaacacaactccacaaaaccggcttataaggtgaggattgcccccacttataaacacattgtcag 19705902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 15480634 - 15480584
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    |||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  15480634 tgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 15480584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 15480396 - 15480319
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || ||| |||| |||||||||  ||||| ||||||||||| |  ||| ||||||||||||| ||||||    
T  15480396 gtggttgggcctaacagaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacattgtcagac 15480319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 25258104 - 25258153
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  25258104 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 25258153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 25258311 - 25258360
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||| || | |||||||| |||||||||||||||| |||||||||||    
T  25258311 gtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggatt 25258360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 25321894 - 25321943
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  25321894 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 25321943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 25322101 - 25322150
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||| || | |||||||| |||||||||||||||| |||||||||||    
T  25322101 gtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggatt 25322150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 27133003 - 27133052
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  27133003 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 27133052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 38731848 - 38731897
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||| | || |||||||||||||||| |||||||| |||||||||||    
T  38731848 gtggttgtgcctaacacaacctcacaaaatcgacttgtgaggtgaggatt 38731897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 522
Target Start/End: Complemental strand, 6103712 - 6103586
Alignment:
Q  400 gaagatttattatataagagttaagtagtttagagactaaactatgatatatttacaaaatgaatattctacataatattctatcc----taaataactt 495  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||| |||||||||||| || |||||||||| |||||||| ||| |    ||| ||||||    
T  6103712 gaagatttattatataggagttaagtagcttagagactaagctaggatatatttacagaaggaatattctaaataatattgtatgctaagtaagtaactt 6103613  T
Q  496 aaagagtaagctaaattttatttacaa 522  Q
    | |||||||| |||| | |||||||||    
T  6103612 agagagtaaggtaaaatatatttacaa 6103586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 5206764 - 5206706
Alignment:
Q  114 gtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaaca 172  Q
    |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||    
T  5206764 gtcttacacaacctcacaaaactgacttgtaaggtgaagattacctccacttataaaca 5206706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 14466420 - 14466495
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||| |  ||| ||||||||||||| ||||    
T  14466420 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgctcccacttataaacacattgtcag 14466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 16419576 - 16419499
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||||    
T  16419576 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 16419499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 2029843 - 2029768
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || | |||||| |||||||||| ||||| ||||||||||| | |||| ||||||||||||| ||||    
T  2029843 gtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaacacattgtcag 2029768  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 2030078 - 2030003
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || | |||||| |||||||||| ||||| ||||||||||| | |||| ||||||||||||| ||||    
T  2030078 gtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaacacattgtcag 2030003  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 5711449 - 5711524
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||    
T  5711449 gtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaacacattgtcag 5711524  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 2324314 - 2324237
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| ||||||||| ||| ||||||    
T  2324314 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcagac 2324237  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 16533615 - 16533546
Alignment:
Q  112 gggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||| ||||||||||||||||||| ||||| | ||||||||| |  ||| ||||||||||||| ||||    
T  16533615 gggtctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttataaacacattgtcag 16533546  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 42639624 - 42639701
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||||| |||||||| |||||||||  ||||| |||||| ||||    ||||||||||||||||| ||||||    
T  42639624 gtggttgggtctaacacaaccccacaaaaccagcttgtgaggtgacgattgtccccatttataaacacattgtcagac 42639701  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 5509152 - 5509076
Alignment:
Q  107 tggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||| || |||||||| |||||||||  ||||| |||||||||||||  ||| ||||||||| ||| ||||||    
T  5509152 tggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattacccccacttataaacaaattgtcagac 5509076  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 17993201 - 17993145
Alignment:
Q  191 atctagatgccgaaaagtgtcatggcaatggagaaggggcaaaccagagttgaaaca 247  Q
    |||||||||||| ||||||||| |||| ||||| ||||||||||| || ||||||||    
T  17993201 atctagatgccggaaagtgtcacggcagtggaggaggggcaaaccggatttgaaaca 17993145  T

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Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 37840412 - 37840336
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    |||||||||| |  |||||||| |||||||||| ||||| |||||| |||| | |||| ||||||||||||| ||||    
T  37840412 tgtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgatgattgcctccacttataaacacattgtcag 37840336  T

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Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 40379219 - 40379287
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacaca 174  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| |||||||||||    
T  40379219 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 40379287  T

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Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 40379454 - 40379522
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacaca 174  Q
    ||||||||| || |||||||| |||||||||| ||||| ||||||||||| |  ||| |||||||||||    
T  40379454 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 40379522  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 5711685 - 5711760
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||| |||||||| |||| |  ||| ||||||||||||| ||||    
T  5711685 gtggttgggcctaacacaaccccacaaaaccggcttttaaggtgatgattgcccccacttataaacacattgtcag 5711760  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 30006589 - 30006663
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttca 180  Q
    ||||||||| | |||||||||||||||||||| |||||  ||||| |||||   ||| |||||||||||| ||||    
T  30006589 gtggttgggccgtacacaacctcacaaaaccggcttgtgtggtgatgattatccccacttataaacacatgttca 30006663  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 30063277 - 30063351
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttca 180  Q
    ||||||||| | |||||||||||||||||||| |||||  ||||| |||||   ||| |||||||||||| ||||    
T  30063277 gtggttgggccatacacaacctcacaaaaccggcttgtgtggtgatgattatccccacttataaacacatgttca 30063351  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 17525360 - 17525425
Alignment:
Q  118 tacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||| | |||||||||| ||||| ||||||||||| |  ||| ||||||||||||| ||||||    
T  17525360 tacacaatcccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 17525425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 17854939 - 17854988
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||||||  ||||||| |||||||||| ||||| |||||||||||    
T  17854939 gtggttgggtctagcacaaccccacaaaaccggcttgtgaggtgaggatt 17854988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 18209049 - 18208988
Alignment:
Q  119 acacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttca 180  Q
    |||||||||||| |||||||||| | |||||| |||| |  |||||||||||||||| ||||    
T  18209049 acacaacctcacgaaaccgacttatgaggtgatgattgctcccatttataaacacatgttca 18208988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 19191620 - 19191669
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    ||||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  19191620 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 19191669  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 27897616 - 27897661
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgag 151  Q
    ||||||||| || |||||||| |||||||||||||||| |||||||    
T  27897616 gtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgag 27897661  T

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Target: scaffold0758 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 342 - 510
Target Start/End: Complemental strand, 808 - 639
Alignment:
Q  342 ttgaataagagagataagagagacatgagatgaga-attgtgtgtcaaaatagcacaa-ggaagatttattatataagagttaagtagtttagagactaa 439  Q
    |||||||||||||| |||||||||||  ||||| | |  |||| ||  |||| ||||| |||||||||||||||||  ||| |||||| |||| | | ||    
T  808 ttgaataagagagaaaagagagacatatgatgaaataccgtgtatctgaataacacaatggaagatttattatatagaagt-aagtagcttagggccgaa 710  T
Q  440 actatgatatatttacaaaatgaatattctacataatattctatcctaaataacttaaagagtaagctaaa 510  Q
     |||||||||||||||| |||||||||||  || |||||| |||| ||| ||||||| |||||||||||||    
T  709 gctatgatatatttacagaatgaatattcatcaaaatattatatcataagtaacttagagagtaagctaaa 639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 5729 - 5659
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    |||||||||||| |||||||| |||||||||| |||||||| ||||||||||  ||| |||||||||||||    
T  5729 gtggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattacccccacttataaacacatt 5659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 1990 - 1913
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||| |  ||| ||||||||||||| ||||||    
T  1990 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcagac 1913  T

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Target: scaffold0519; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 2225 - 2150
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcag 181  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||| |  ||| ||||||||||||| ||||    
T  2225 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 2150  T

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Target: scaffold0766 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 6348 - 6271
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || |||||||| ||||||| || ||||| ||||||||||| |  ||| ||||||||||||| ||||||    
T  6348 gtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 6271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 21013 - 20936
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    |||||||||  | |||||||| |||||||||| ||||| ||||||||||||| | || ||||||| ||||| ||||||    
T  21013 gtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggattaccttcacttataaatacattgtcagac 20936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 89562 - 89607
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtga 150  Q
    |||||||||  || ||||||||||||||||||||||||||||||||    
T  89562 tgtggttggacctaacacaacctcacaaaaccgacttgtaaggtga 89607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 81916 - 81872
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtga 150  Q
    ||||||||| || |||||||| |||||||||||||||||||||||    
T  81916 gtggttgggcctaacacaaccccacaaaaccgacttgtaaggtga 81872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 12722 - 12672
Alignment:
Q  105 tgtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggatt 155  Q
    |||||||||| || |||||||| ||||||| |||||||| |||||||||||    
T  12722 tgtggttgggcctaacacaaccacacaaaatcgacttgtgaggtgaggatt 12672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 5764 - 5841
Alignment:
Q  106 gtggttgggtcttacacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacattttcagac 183  Q
    ||||||||| || |||||||| | |||||||| ||||| || |||||||| |  ||| ||||||||||||| ||||||    
T  5764 gtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcagac 5841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 51297 - 51240
Alignment:
Q  119 acacaacctcacaaaaccgacttgtaaggtgaggattacatccatttataaacacatt 176  Q
    |||||||| |||||||| ||||||| ||||||||||| |  ||| |||||||||||||    
T  51297 acacaaccccacaaaactgacttgtgaggtgaggattgcccccacttataaacacatt 51240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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