View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14177_low_39 (Length: 359)
Name: NF14177_low_39
Description: NF14177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14177_low_39 |
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Alignment Details
Target: chr3 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 8 - 342
Target Start/End: Original strand, 9751022 - 9751356
Alignment:
| Q |
8 |
gtcattgaaataggcatgtattgctccacagtatctgcattatttgattttggaatgaggatcaatgtattggcattatagtttgtaaagatccattcag |
107 |
Q |
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| T |
9751022 |
gtcattgaaataggcatgtatttctctacagtatctgcattatttgattttggaatgaggatcaatgtattggcattatagtttgtaaagatccattcag |
9751121 |
T |
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| Q |
108 |
aaataaagaattgtaagataccatcaacgacttctttgtgtactataagtttgatagaagaatgctcgaaatccatctagactaggggcactttctttat |
207 |
Q |
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| T |
9751122 |
aaataaagaattgtaagataccatcaacgacttctttgtgtactataagtttgatagaagaatgctcgaaatccatctagactaggggcactttctttat |
9751221 |
T |
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| Q |
208 |
tcaaactaaacacatcattttttattttagaaatatcttgaagatcactgataattttggttattttgtggaaaaatgcagtgatgacaaacttgatttt |
307 |
Q |
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| T |
9751222 |
tcaaactaaacacatcattttttattttagaaatatcttgaagatcactgataattttggttattttgtggaaaaatgcagtgatgacaaacttgatttt |
9751321 |
T |
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| Q |
308 |
tcatgccaaaaacactcctgtccttctaaagcttt |
342 |
Q |
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| T |
9751322 |
tcatgccaaaaacactcctgtccttctaaagcttt |
9751356 |
T |
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