View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14177_low_43 (Length: 342)

Name: NF14177_low_43
Description: NF14177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14177_low_43
NF14177_low_43
[»] chr3 (24 HSPs)
chr3 (80-320)||(1339367-1339608)
chr3 (20-60)||(28731934-28731974)
chr3 (22-60)||(20625653-20625691)
chr3 (19-60)||(23879032-23879073)
chr3 (20-61)||(35359804-35359845)
chr3 (20-61)||(35966329-35966370)
chr3 (20-61)||(43897963-43898004)
chr3 (19-60)||(49285594-49285635)
chr3 (20-60)||(11250045-11250085)
chr3 (20-60)||(36518187-36518227)
chr3 (21-59)||(36540193-36540231)
chr3 (19-61)||(47570369-47570411)
chr3 (20-61)||(11056072-11056113)
chr3 (19-60)||(19921313-19921354)
chr3 (20-61)||(27396940-27396981)
chr3 (20-61)||(35069402-35069443)
chr3 (20-61)||(40559761-40559802)
chr3 (20-61)||(40639689-40639730)
chr3 (19-60)||(43904496-43904537)
chr3 (20-61)||(46316477-46316518)
chr3 (19-60)||(48209432-48209473)
chr3 (20-61)||(52256752-52256793)
chr3 (20-60)||(9318604-9318644)
chr3 (20-60)||(46311446-46311486)
[»] chr8 (23 HSPs)
chr8 (247-312)||(16962245-16962310)
chr8 (20-61)||(3673843-3673884)
chr8 (20-61)||(14725389-14725430)
chr8 (20-61)||(20662609-20662650)
chr8 (20-60)||(5917369-5917409)
chr8 (20-60)||(34642438-34642478)
chr8 (20-60)||(43105880-43105920)
chr8 (19-61)||(19649498-19649540)
chr8 (22-60)||(35058414-35058452)
chr8 (20-61)||(8971892-8971933)
chr8 (20-61)||(14188177-14188218)
chr8 (20-61)||(16395460-16395501)
chr8 (20-61)||(17919815-17919856)
chr8 (20-61)||(24242583-24242624)
chr8 (20-61)||(32922870-32922911)
chr8 (20-61)||(33067390-33067431)
chr8 (20-61)||(37295213-37295254)
chr8 (20-61)||(37817463-37817504)
chr8 (22-58)||(10286468-10286504)
chr8 (19-59)||(13634932-13634972)
chr8 (19-59)||(13735345-13735385)
chr8 (20-60)||(14138786-14138826)
chr8 (20-60)||(24241899-24241939)
[»] chr7 (25 HSPs)
chr7 (20-60)||(30627711-30627751)
chr7 (20-61)||(14817514-14817555)
chr7 (20-61)||(15264510-15264551)
chr7 (19-60)||(24829066-24829107)
chr7 (19-60)||(38261087-38261128)
chr7 (20-61)||(43188619-43188660)
chr7 (20-61)||(48401289-48401330)
chr7 (20-60)||(27339729-27339769)
chr7 (20-60)||(45594887-45594927)
chr7 (20-60)||(45946797-45946837)
chr7 (22-61)||(2228080-2228119)
chr7 (19-61)||(2286093-2286135)
chr7 (20-61)||(1323770-1323811)
chr7 (20-61)||(6327298-6327339)
chr7 (19-60)||(7264491-7264532)
chr7 (20-61)||(8522787-8522828)
chr7 (20-61)||(10703891-10703932)
chr7 (20-61)||(17895721-17895762)
chr7 (20-61)||(29628384-29628425)
chr7 (20-61)||(31299995-31300036)
chr7 (20-61)||(33512884-33512925)
chr7 (20-61)||(40809132-40809173)
chr7 (20-61)||(45041733-45041774)
chr7 (22-58)||(31807052-31807088)
chr7 (20-60)||(33906370-33906410)
[»] chr2 (11 HSPs)
chr2 (19-61)||(29740958-29741000)
chr2 (20-61)||(15488836-15488877)
chr2 (20-61)||(43461334-43461375)
chr2 (20-60)||(18055946-18055986)
chr2 (21-61)||(19967822-19967862)
chr2 (19-61)||(41164648-41164690)
chr2 (20-61)||(16010613-16010654)
chr2 (20-61)||(18999416-18999457)
chr2 (20-61)||(23497512-23497553)
chr2 (20-61)||(36685403-36685444)
chr2 (20-60)||(33898317-33898357)
[»] chr6 (11 HSPs)
chr6 (20-61)||(14465825-14465866)
chr6 (20-60)||(9727582-9727622)
chr6 (20-60)||(22721340-22721380)
chr6 (19-61)||(10318887-10318929)
chr6 (20-61)||(2314597-2314638)
chr6 (20-61)||(5603447-5603488)
chr6 (20-57)||(6556487-6556524)
chr6 (19-60)||(12473733-12473774)
chr6 (20-61)||(24571617-24571658)
chr6 (20-57)||(30614918-30614955)
chr6 (20-61)||(35164605-35164646)
[»] chr5 (27 HSPs)
chr5 (20-61)||(972594-972635)
chr5 (20-61)||(1277525-1277566)
chr5 (20-61)||(23219114-23219155)
chr5 (20-61)||(26310748-26310789)
chr5 (20-61)||(32273978-32274019)
chr5 (20-61)||(40596043-40596084)
chr5 (20-60)||(27003964-27004004)
chr5 (23-61)||(19836087-19836125)
chr5 (19-61)||(19867281-19867323)
chr5 (19-61)||(28489270-28489312)
chr5 (20-61)||(671059-671100)
chr5 (20-61)||(4444866-4444907)
chr5 (20-61)||(5203640-5203681)
chr5 (20-61)||(9053971-9054012)
chr5 (20-57)||(9068890-9068927)
chr5 (20-61)||(9362499-9362540)
chr5 (20-61)||(10393502-10393543)
chr5 (20-61)||(21067524-21067565)
chr5 (24-61)||(24051494-24051531)
chr5 (20-61)||(24638041-24638082)
chr5 (20-61)||(29402097-29402138)
chr5 (20-61)||(36245994-36246035)
chr5 (20-61)||(37067785-37067826)
chr5 (20-61)||(38975738-38975779)
chr5 (19-60)||(43070685-43070726)
chr5 (258-298)||(29909497-29909537)
chr5 (20-60)||(30269173-30269213)
[»] chr4 (24 HSPs)
chr4 (20-57)||(42116567-42116604)
chr4 (20-61)||(47462036-47462077)
chr4 (20-61)||(54864483-54864524)
chr4 (20-60)||(32233699-32233739)
chr4 (20-60)||(51425414-51425454)
chr4 (22-61)||(7413181-7413220)
chr4 (22-61)||(7459261-7459300)
chr4 (19-61)||(25586327-25586369)
chr4 (19-61)||(28983818-28983860)
chr4 (19-61)||(35615971-35616013)
chr4 (20-61)||(8810769-8810810)
chr4 (20-61)||(9064788-9064829)
chr4 (19-60)||(18371432-18371473)
chr4 (20-61)||(28033279-28033320)
chr4 (20-61)||(28187160-28187201)
chr4 (20-61)||(51675667-51675708)
chr4 (22-59)||(54065281-54065318)
chr4 (20-61)||(54096940-54096981)
chr4 (19-59)||(939673-939713)
chr4 (20-60)||(31375200-31375240)
chr4 (20-60)||(39997774-39997814)
chr4 (21-61)||(48139779-48139819)
chr4 (24-60)||(48860093-48860129)
chr4 (20-60)||(51281555-51281595)
[»] chr1 (19 HSPs)
chr1 (20-61)||(49948328-49948369)
chr1 (20-60)||(42630986-42631026)
chr1 (20-60)||(50145133-50145173)
chr1 (19-61)||(8193962-8194004)
chr1 (19-61)||(43907224-43907266)
chr1 (19-61)||(47429592-47429634)
chr1 (20-61)||(2112834-2112875)
chr1 (24-61)||(2208897-2208934)
chr1 (23-60)||(12663677-12663714)
chr1 (20-61)||(27856084-27856125)
chr1 (20-61)||(43086471-43086512)
chr1 (19-60)||(45007693-45007734)
chr1 (20-61)||(48731756-48731797)
chr1 (20-61)||(52492681-52492722)
chr1 (20-60)||(5598388-5598428)
chr1 (24-60)||(15331063-15331099)
chr1 (20-60)||(24254412-24254452)
chr1 (20-60)||(36586338-36586378)
chr1 (20-60)||(45566710-45566750)
[»] scaffold0057 (1 HSPs)
scaffold0057 (20-60)||(64370-64410)
[»] scaffold0014 (1 HSPs)
scaffold0014 (20-58)||(195828-195866)
[»] scaffold0882 (1 HSPs)
scaffold0882 (20-60)||(3698-3738)


Alignment Details
Target: chr3 (Bit Score: 155; Significance: 3e-82; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 80 - 320
Target Start/End: Original strand, 1339367 - 1339608
Alignment:
Q  80 tggattcgaagtatatcataaggtcgaaaattcaaccccacaccggttgtacttttacagccacatttttctaaaaattaattcaatgttactttgttnn 179  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||      
T  1339367 tggattcgaagtat--cataaggtcgaaaattcaaccccacaccgattgtacttttacggccacatttttctaaaaattaattcaatgttactttgttaa 1339464  T
Q  180 nnnnnn---tagaacttgctcaataaaattagaatttgaagttgatcataaagaatcccacaaaacaaactcttaaaatttgtggttggacctaacacaa 276  Q
             |||||||||||||| |||| |||||||||||||||||| |||||||||  | ||||||||||||||||||||||| |||||||||||||||    
T  1339465 aaaaaaaattagaacttgctcaaaaaaaatagaatttgaagttgatcgtaaagaatcttagaaaacaaactcttaaaatttgtgattggacctaacacaa 1339564  T
Q  277 ttcaacaaaaccgatttgtgagacgagaattgttcctatttttt 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  1339565 ttcaacaaaaccgatttgtaagacgagaattgttcctatttttt 1339608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 28731934 - 28731974
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  28731934 tgtgtgtgagtttacaatgactttgtcatttcgtctatcta 28731974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 20625691 - 20625653
Alignment:
Q  22 tgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  20625691 tgtgtgagtttacaatgactttgtcatttcgtctatcta 20625653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 23879032 - 23879073
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  23879032 atgtgtgtgagtttacaatgacgttgtcatttcgtctatcta 23879073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 35359804 - 35359845
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  35359804 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 35359845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 35966329 - 35966370
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  35966329 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 35966370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 43898004 - 43897963
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  43898004 tgtgtgtgagtttacaatgactttgccatttcgtctatctac 43897963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 49285594 - 49285635
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  49285594 atgtgtgtgagtttataatgactttgtcatttcgtctatcta 49285635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 11250045 - 11250085
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  11250045 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 11250085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 36518187 - 36518227
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  36518187 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 36518227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 36540193 - 36540231
Alignment:
Q  21 gtgtgtgagtttacaatgactttgtcatttcctctatct 59  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  36540193 gtgtgtgagtttataatgactttgtcatttcgtctatct 36540231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 47570369 - 47570411
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  47570369 atgtgtgtgagtttataatgactttgtcattttgtctatctac 47570411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 11056113 - 11056072
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  11056113 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 11056072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 19921354 - 19921313
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  19921354 atgtgtgtgagtttataatgactttgccatttcgtctatcta 19921313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 27396940 - 27396981
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  27396940 tgtgtgtgagtttataatgactttgccatttcttctatctac 27396981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 35069402 - 35069443
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  35069402 tgtgtgtgagtttataatggctttgtcatttcatctatctac 35069443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 40559761 - 40559802
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  40559761 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 40559802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 40639689 - 40639730
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  40639689 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 40639730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 43904537 - 43904496
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||    
T  43904537 atgtgtgtgagtttataataactttgtcatttcgtctatcta 43904496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 46316518 - 46316477
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||| ||||||||||||| |||||||||    
T  46316518 tgtgtgtgagtttataataactttgtcatttcgtctatctac 46316477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 48209473 - 48209432
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||    
T  48209473 atgtgtgtgagcttataatgactttgtcatttcgtctatcta 48209432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 52256793 - 52256752
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  52256793 tgtgtgtgagtttataatgactttgccatttcgtctatctac 52256752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 9318604 - 9318644
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||| ||||||||||| ||||||||    
T  9318604 tgtgtgtgagtttataatgattttgtcatttcgtctatcta 9318644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 46311486 - 46311446
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  46311486 tgtgtgtgagtttataatgactttgccatttcgtctatcta 46311446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 16962245 - 16962310
Alignment:
Q  247 tcttaaaatttgtggttggacctaacacaattcaacaaaaccgatttgtgagacgagaattgttcc 312  Q
    |||||||| |||||||||||||||||||||| | ||||||||| ||||||||  ||||||||||||    
T  16962245 tcttaaaaattgtggttggacctaacacaatcccacaaaaccggtttgtgaggtgagaattgttcc 16962310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 3673884 - 3673843
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  3673884 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 3673843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 14725389 - 14725430
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  14725389 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 14725430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 20662609 - 20662650
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  20662609 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 20662650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 5917369 - 5917409
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  5917369 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 5917409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 34642478 - 34642438
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  34642478 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 34642438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 43105920 - 43105880
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  43105920 tgtgtgtgagtttataatgactttgtcatttcatctatcta 43105880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 19649540 - 19649498
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| |||| |||||||||||| |||||||||    
T  19649540 atgtgtgtgagtttataatggctttgtcatttcgtctatctac 19649498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 35058414 - 35058452
Alignment:
Q  22 tgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  35058414 tgtgtgagtttataatgactttgtcatttcgtctatcta 35058452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 8971892 - 8971933
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||| ||||||||||||||| |||||| |||||||||    
T  8971892 tgtgtgtgaatttacaatgactttgccatttcgtctatctac 8971933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 14188177 - 14188218
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  14188177 tgtgtgtgagtttataatgactttgccatttcgtctatctac 14188218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 16395460 - 16395501
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  16395460 tgtgtgtgagtttataatgactttgccatttcgtctatctac 16395501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 17919856 - 17919815
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  17919856 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 17919815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 24242624 - 24242583
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||| ||||||| |||||||||||||||| |||||||||    
T  24242624 tgtgtgtcagtttacgatgactttgtcatttcgtctatctac 24242583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 32922911 - 32922870
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  32922911 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 32922870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 33067431 - 33067390
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  33067431 tgtgtgtgagtttataatgactttgccatttcgtctatctac 33067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 37295213 - 37295254
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  37295213 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 37295254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 37817463 - 37817504
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  37817463 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 37817504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 10286504 - 10286468
Alignment:
Q  22 tgtgtgagtttacaatgactttgtcatttcctctatc 58  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  10286504 tgtgtgagtttataatgactttgtcatttcgtctatc 10286468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 13634932 - 13634972
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatct 59  Q
    ||||||||||||||| ||||||||||||||||  |||||||    
T  13634932 atgtgtgtgagtttataatgactttgtcattttgtctatct 13634972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 13735345 - 13735385
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatct 59  Q
    ||||||||||||||| ||||||||||||||||  |||||||    
T  13735345 atgtgtgtgagtttataatgactttgtcattttgtctatct 13735385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 14138826 - 14138786
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| |||| |||||||||||||||| ||||    
T  14138826 tgtgtgtgagtttataatggctttgtcatttcctctgtcta 14138786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 24241939 - 24241899
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||| |||| ||||||||||||||||| ||||||||    
T  24241939 tgtgtgtgaatttataatgactttgtcatttcgtctatcta 24241899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 30627711 - 30627751
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  30627711 tgtgtgtgagtttacaatgactttgtcatttcgtctatcta 30627751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 14817514 - 14817555
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  14817514 tgtgtatgagtttacaatgactttgtcatttcgtctatctac 14817555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 15264510 - 15264551
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  15264510 tgtgtatgagtttacaatgactttgtcatttcgtctatctac 15264551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 24829107 - 24829066
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  24829107 atgtgtgtgagtttacaatgactgtgtcatttcgtctatcta 24829066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 38261087 - 38261128
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  38261087 atgtgtgtgagtttataatgactttgtcatttcgtctatcta 38261128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 43188619 - 43188660
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  43188619 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 43188660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 48401330 - 48401289
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  48401330 tgtgtgtgaatttacaatgactttgtcatttcttctatctac 48401289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 27339769 - 27339729
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  27339769 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 27339729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 45594887 - 45594927
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  45594887 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 45594927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 45946797 - 45946837
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  45946797 tgtgtgtgagtttacaatggctttgtcatttcgtctatcta 45946837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 2228119 - 2228080
Alignment:
Q  22 tgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  2228119 tgtgtgagtttataatgactttgtcatttcgtctatctac 2228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 2286135 - 2286093
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| ||||||||||||||| | |||||||||    
T  2286135 atgtgtgtgagtttataatgactttgtcattccgtctatctac 2286093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 1323770 - 1323811
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  1323770 tgtgtgtgagtttataatgactttgccatttcgtctatctac 1323811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 6327298 - 6327339
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  6327298 tgtgtgtgagtttataatgactttgccatttcgtctatctac 6327339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 7264491 - 7264532
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  7264491 atgtgtgtgagtttataatgactttgccatttcgtctatcta 7264532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 8522828 - 8522787
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||| ||||| |||||||||    
T  8522828 tgtgtgtgagtttataatgactttgttatttcgtctatctac 8522787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 10703932 - 10703891
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  10703932 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 10703891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 17895721 - 17895762
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  17895721 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 17895762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 29628425 - 29628384
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  29628425 tgtgtgtgagtttaaaatggctttgtcatttcgtctatctac 29628384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 31300036 - 31299995
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||| ||||||||||||| |||||||||    
T  31300036 tgtgtgtgagtttataataactttgtcatttcgtctatctac 31299995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 33512884 - 33512925
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  33512884 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 33512925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 40809132 - 40809173
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  40809132 tgtgtgtgagtttataatgactttgccatttcgtctatctac 40809173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 45041774 - 45041733
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  45041774 tgtgtgtgagtttataatgactttgccatttcgtctatctac 45041733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 31807088 - 31807052
Alignment:
Q  22 tgtgtgagtttacaatgactttgtcatttcctctatc 58  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  31807088 tgtgtgagtttataatgactttgtcatttcgtctatc 31807052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 33906370 - 33906410
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| |||| |||||||||||| ||||||||    
T  33906370 tgtgtgtgagtttataatggctttgtcatttcgtctatcta 33906410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 29741000 - 29740958
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  29741000 atgtgtgtgagtttacaatgactttgtcatttcgtttatctac 29740958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 15488836 - 15488877
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  15488836 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 15488877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 43461375 - 43461334
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  43461375 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 43461334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 18055946 - 18055986
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  18055946 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 18055986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 19967822 - 19967862
Alignment:
Q  21 gtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  19967822 gtgtgtgagtttataatgactttgtcatttcgtctatctac 19967862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 41164690 - 41164648
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| |||| |||||||||||| |||||||||    
T  41164690 atgtgtgtgagtttataatggctttgtcatttcatctatctac 41164648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 16010654 - 16010613
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  16010654 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 16010613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 18999416 - 18999457
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||  |||||||||||||||| |||||||||    
T  18999416 tgtgtgtgagtttattatgactttgtcatttcgtctatctac 18999457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 23497553 - 23497512
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  23497553 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 23497512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 36685444 - 36685403
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||| ||||||||||||| |||||||||    
T  36685444 tgtgtgtgagtttataataactttgtcatttcgtctatctac 36685403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 33898317 - 33898357
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| || |||||    
T  33898317 tgtgtgtgagtttataatgactttgtcatttcgtccatcta 33898357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 14465866 - 14465825
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  14465866 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 14465825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 9727582 - 9727622
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  9727582 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 9727622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 22721340 - 22721380
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  22721340 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 22721380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 10318929 - 10318887
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||    
T  10318929 atgtgtgtgagattataatgactttgtcatttcgtctatctac 10318887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 2314638 - 2314597
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  2314638 tgtgtgtgagtttataatgactttgccatttcgtctatctac 2314597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 5603488 - 5603447
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  5603488 tgtgtgtgagtttataatgactttgccatttcgtctatctac 5603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 6556524 - 6556487
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctat 57  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  6556524 tgtgtgtgagtttacaatgactttgccatttcgtctat 6556487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 12473733 - 12473774
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  12473733 atgtgtgtgagtttataatgattttgtcatttcgtctatcta 12473774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 24571658 - 24571617
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||| |||||| ||||||||||||||||| |||||||||    
T  24571658 tgtgtgtaagtttataatgactttgtcatttcgtctatctac 24571617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 30614955 - 30614918
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctat 57  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  30614955 tgtgtgtgagtttataatgactttgtcatttcgtctat 30614918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 35164646 - 35164605
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  35164646 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 35164605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 972635 - 972594
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  972635 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 972594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 1277525 - 1277566
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  1277525 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 1277566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 23219155 - 23219114
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  23219155 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 23219114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 26310789 - 26310748
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  26310789 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 26310748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 32274019 - 32273978
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  32274019 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 32273978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 40596043 - 40596084
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  40596043 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 40596084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 27004004 - 27003964
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  27004004 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 27003964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 19836125 - 19836087
Alignment:
Q  23 gtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  19836125 gtgtgagtttataatgactttgtcatttcgtctatctac 19836087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 19867323 - 19867281
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  19867323 atgtgtgtgagtttataatgactttgtcatttcgcctatctac 19867281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 28489270 - 28489312
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| |||||||||| |||||| |||||||||    
T  28489270 atgtgtgtgagtttataatgactttgccatttcgtctatctac 28489312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 671100 - 671059
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  671100 tgtgtgtgagtttataatgactttgccatttcgtctatctac 671059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 4444907 - 4444866
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  4444907 tgtgtgtgagtttataatgcctttgtcatttcgtctatctac 4444866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 5203640 - 5203681
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||  |||||||||    
T  5203640 tgtgtgtgagtttataatgactttgtcattttgtctatctac 5203681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 9054012 - 9053971
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  9054012 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 9053971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 9068890 - 9068927
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctat 57  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  9068890 tgtgtgtgagtttataatgactttgtcatttcgtctat 9068927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 9362540 - 9362499
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||||| |||| |||||||||    
T  9362540 tgtgtgtgagtttataatgactttgtcgtttcgtctatctac 9362499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 10393543 - 10393502
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  10393543 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 10393502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 21067524 - 21067565
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||| ||||||||||||| |||||||||    
T  21067524 tgtgtgtgagtttataataactttgtcatttcgtctatctac 21067565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 24051494 - 24051531
Alignment:
Q  24 tgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  24051494 tgtgagtttataatgactttgtcatttcgtctatctac 24051531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 24638041 - 24638082
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||| ||||||| |||||||||    
T  24638041 tgtgtgtgagtttataatgactttatcatttcgtctatctac 24638082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 29402097 - 29402138
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||| ||||||||||| |||||||||    
T  29402097 tgtgtgtgagtttataatgattttgtcatttcgtctatctac 29402138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 36246035 - 36245994
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  36246035 tgtgtgtgagtttataatgactttgacatttcgtctatctac 36245994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 37067785 - 37067826
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  37067785 tgtgtgtgagtttataatgactttgccatttcgtctatctac 37067826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 38975779 - 38975738
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  38975779 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 38975738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 43070726 - 43070685
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||| |||||||||| |||||| ||||||||    
T  43070726 atgtgtgtgagtttataatgactttgccatttcgtctatcta 43070685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 29909497 - 29909537
Alignment:
Q  258 gtggttggacctaacacaattcaacaaaaccgatttgtgag 298  Q
    |||||| ||||||||||||| | ||||||||||||||||||    
T  29909497 gtggttagacctaacacaatcccacaaaaccgatttgtgag 29909537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 30269213 - 30269173
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||  ||||||||    
T  30269213 tgtgtgtgagtttataatgactttgtcattttatctatcta 30269173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 42116567 - 42116604
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctat 57  Q
    |||||||||||||||||||||||||||||||| |||||    
T  42116567 tgtgtgtgagtttacaatgactttgtcatttcatctat 42116604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 47462077 - 47462036
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  47462077 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 47462036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 54864483 - 54864524
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  54864483 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 54864524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 32233699 - 32233739
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  32233699 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 32233739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 51425414 - 51425454
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  51425414 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 51425454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 7413181 - 7413220
Alignment:
Q  22 tgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  7413181 tgtgtgagtttataatgactttgtcatttcgtctatctac 7413220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 7459261 - 7459300
Alignment:
Q  22 tgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  7459261 tgtgtgagtttataatgactttgtcatttcgtctatctac 7459300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 25586369 - 25586327
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| |||| |||||||||||| |||||||||    
T  25586369 atgtgtgtgagtttataatggctttgtcatttcgtctatctac 25586327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 28983818 - 28983860
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  28983818 atgtgtgtgagtttataatgactttgtcattttgtctatctac 28983860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 35615971 - 35616013
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||    
T  35615971 atgtgtgtgagtttataataactttgtcatttcatctatctac 35616013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 8810810 - 8810769
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||| ||||| |||||||||    
T  8810810 tgtgtgtgagtttataatgactttgttatttcgtctatctac 8810769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 9064829 - 9064788
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||  |||||||||    
T  9064829 tgtgtgtgagtttataatgactttgtcattttgtctatctac 9064788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 18371432 - 18371473
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||| |||| |||||||||||| ||||||||    
T  18371432 atgtgtgtgagtttataatggctttgtcatttcgtctatcta 18371473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 28033279 - 28033320
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  28033279 tgtgtgtgagtttataatgactttgccatttcgtctatctac 28033320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 28187201 - 28187160
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  28187201 tgtgtgtgagtttataatgactttgccatttcgtctatctac 28187160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 51675708 - 51675667
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  51675708 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 51675667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 54065318 - 54065281
Alignment:
Q  22 tgtgtgagtttacaatgactttgtcatttcctctatct 59  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  54065318 tgtgtgagtttacaataactttgtcatttcgtctatct 54065281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 54096981 - 54096940
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| ||| |||||    
T  54096981 tgtgtgtgagtttataatgactttgtcatttcgtctgtctac 54096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 939673 - 939713
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatct 59  Q
    ||||||||||||||| ||| ||||||||||||| |||||||    
T  939673 atgtgtgtgagtttataataactttgtcatttcgtctatct 939713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 31375200 - 31375240
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||| |||||| ||||||||||||||||| ||||||||    
T  31375200 tgtgtgtaagtttataatgactttgtcatttcgtctatcta 31375240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 39997814 - 39997774
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  39997814 tgtgtgtgagtttataatgactttgccatttcgtctatcta 39997774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 48139819 - 48139779
Alignment:
Q  21 gtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||| ||||||||||||||||||| || |||||||||    
T  48139819 gtgtgtgaatttacaatgactttgtcatctcgtctatctac 48139779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 48860093 - 48860129
Alignment:
Q  24 tgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  48860093 tgtgagtttataatgactttgtcatttcgtctatcta 48860129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 51281555 - 51281595
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||| |||| ||||||||||||||||| ||||||||    
T  51281555 tgtgtgtgaatttataatgactttgtcatttcgtctatcta 51281595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 49948328 - 49948369
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  49948328 tgtgtgtgagtttataatgactttgtcatttcgtctatctac 49948369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 42631026 - 42630986
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  42631026 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 42630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 50145173 - 50145133
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  50145173 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 50145133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 8194004 - 8193962
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| |||||||||| |||||| |||||||||    
T  8194004 atgtgtgtgagtttataatgactttgccatttcgtctatctac 8193962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 43907266 - 43907224
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| |||| |||||||||||| |||||||||    
T  43907266 atgtgtgtgagtttataatggctttgtcatttcgtctatctac 43907224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 47429634 - 47429592
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    ||||||||||||||| |||| |||||||||||| |||||||||    
T  47429634 atgtgtgtgagtttataatggctttgtcatttcgtctatctac 47429592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 2112834 - 2112875
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  2112834 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 2112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 2208934 - 2208897
Alignment:
Q  24 tgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  2208934 tgtgagtttataatgactttgtcatttcgtctatctac 2208897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 12663677 - 12663714
Alignment:
Q  23 gtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  12663677 gtgtgagtttataatgactttgtcatttcgtctatcta 12663714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 27856084 - 27856125
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||| ||||||| |||||||||    
T  27856084 tgtgtgtgagtttataatgactttttcatttcgtctatctac 27856125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 43086512 - 43086471
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  43086512 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 43086471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 45007734 - 45007693
Alignment:
Q  19 atgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    ||||||||||||||| |||| |||||||||||| ||||||||    
T  45007734 atgtgtgtgagtttataatggctttgtcatttcgtctatcta 45007693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 48731797 - 48731756
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  48731797 tgtgtgtgagtttataatggctttgtcatttcgtctatctac 48731756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 52492722 - 52492681
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatctac 61  Q
    |||||||||||||| ||||||||| ||||||| |||||||||    
T  52492722 tgtgtgtgagtttataatgactttatcatttcgtctatctac 52492681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 5598388 - 5598428
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| |||| |||||||||||| ||||||||    
T  5598388 tgtgtgtgagtttataatggctttgtcatttcgtctatcta 5598428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 15331099 - 15331063
Alignment:
Q  24 tgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  15331099 tgtgagtttataatgactttgtcatttcgtctatcta 15331063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 24254452 - 24254412
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  24254452 tgtgtgtgagtttataatgactttatcatttcgtctatcta 24254412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 36586338 - 36586378
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| |||| |||||||||||| ||||||||    
T  36586338 tgtgtgtgagtttataatggctttgtcatttcatctatcta 36586378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 45566750 - 45566710
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  45566750 tgtgtgtgagtttataatgactttgccatttcgtctatcta 45566710  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 64370 - 64410
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  64370 tgtgtgtgagtttataatgactttgtcatttcgtctatcta 64410  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 195828 - 195866
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatc 58  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  195828 tgtgtgtgagtttataatgactttgtcatttcgtctatc 195866  T

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Target: scaffold0882 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 3738 - 3698
Alignment:
Q  20 tgtgtgtgagtttacaatgactttgtcatttcctctatcta 60  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  3738 tgtgtgtgagtttataatgactttgccatttcgtctatcta 3698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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