View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14177_low_51 (Length: 319)

Name: NF14177_low_51
Description: NF14177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14177_low_51
NF14177_low_51
[»] chr8 (43 HSPs)
chr8 (67-274)||(32925757-32925964)
chr8 (194-273)||(11658143-11658222)
chr8 (268-319)||(32114556-32114607)
chr8 (273-319)||(54693-54739)
chr8 (273-319)||(2890243-2890289)
chr8 (273-319)||(3304359-3304405)
chr8 (273-319)||(4245662-4245708)
chr8 (273-319)||(6552658-6552704)
chr8 (273-319)||(7785859-7785905)
chr8 (273-319)||(7805780-7805826)
chr8 (273-319)||(12343221-12343267)
chr8 (273-319)||(15888433-15888479)
chr8 (273-319)||(43199435-43199481)
chr8 (273-319)||(44498268-44498314)
chr8 (275-319)||(31654618-31654662)
chr8 (273-319)||(7012174-7012220)
chr8 (273-319)||(12763735-12763781)
chr8 (273-319)||(25601081-25601127)
chr8 (273-319)||(32211444-32211490)
chr8 (273-319)||(39571284-39571330)
chr8 (273-319)||(33289342-33289388)
chr8 (233-274)||(2525443-2525484)
chr8 (275-316)||(3304283-3304324)
chr8 (1-37)||(32925963-32925999)
chr8 (1-37)||(32926001-32926037)
chr8 (273-316)||(28463614-28463657)
chr8 (275-314)||(32114480-32114519)
chr8 (273-303)||(6899422-6899452)
chr8 (273-319)||(13578860-13578906)
chr8 (282-316)||(24692062-24692096)
chr8 (275-316)||(54617-54658)
chr8 (275-316)||(2890167-2890208)
chr8 (275-316)||(6552739-6552780)
chr8 (275-316)||(7785783-7785824)
chr8 (275-316)||(8587175-8587216)
chr8 (275-316)||(12763659-12763700)
chr8 (275-316)||(25601005-25601046)
chr8 (275-316)||(33289266-33289307)
chr8 (275-316)||(39571208-39571249)
chr8 (275-316)||(43199359-43199400)
chr8 (275-303)||(5031468-5031496)
chr8 (276-316)||(12343146-12343186)
chr8 (279-319)||(27422271-27422311)
[»] chr6 (26 HSPs)
chr6 (273-319)||(35031082-35031128)
chr6 (273-319)||(2830338-2830384)
chr6 (273-319)||(6068569-6068615)
chr6 (273-319)||(6330118-6330164)
chr6 (273-319)||(8099533-8099579)
chr6 (273-319)||(8383050-8383096)
chr6 (273-319)||(11572226-11572272)
chr6 (273-319)||(26602326-26602372)
chr6 (273-319)||(33052875-33052921)
chr6 (273-319)||(6143557-6143603)
chr6 (273-319)||(13853674-13853720)
chr6 (273-311)||(9644699-9644737)
chr6 (273-311)||(9650716-9650754)
chr6 (273-319)||(13043761-13043807)
chr6 (275-316)||(3788121-3788162)
chr6 (275-319)||(8417874-8417918)
chr6 (275-316)||(2830419-2830460)
chr6 (275-316)||(6330199-6330240)
chr6 (275-316)||(8099614-8099655)
chr6 (275-316)||(8382974-8383015)
chr6 (275-316)||(9644780-9644821)
chr6 (275-316)||(9650797-9650838)
chr6 (275-316)||(11572150-11572191)
chr6 (275-316)||(13853598-13853639)
chr6 (275-316)||(26602407-26602448)
chr6 (275-311)||(22896476-22896512)
[»] chr4 (40 HSPs)
chr4 (273-319)||(51894663-51894709)
chr4 (268-319)||(20538767-20538818)
chr4 (273-319)||(3372124-3372170)
chr4 (273-319)||(24704373-24704419)
chr4 (273-319)||(33551204-33551250)
chr4 (273-319)||(47833614-47833660)
chr4 (273-319)||(48336266-48336312)
chr4 (273-319)||(53337373-53337419)
chr4 (273-319)||(3904764-3904810)
chr4 (273-319)||(3992979-3993025)
chr4 (273-319)||(6121974-6122020)
chr4 (273-319)||(7579313-7579359)
chr4 (273-315)||(26231580-26231622)
chr4 (273-319)||(42797735-42797781)
chr4 (273-319)||(46797728-46797774)
chr4 (275-316)||(43900554-43900595)
chr4 (276-316)||(17236872-17236912)
chr4 (275-319)||(40913270-40913314)
chr4 (276-319)||(52756681-52756724)
chr4 (273-319)||(47838698-47838744)
chr4 (275-316)||(4780379-4780420)
chr4 (275-316)||(42797816-42797857)
chr4 (275-316)||(48336347-48336388)
chr4 (279-319)||(33621805-33621845)
chr4 (279-319)||(41469847-41469887)
chr4 (273-319)||(5986879-5986925)
chr4 (284-314)||(32822295-32822325)
chr4 (275-316)||(3372205-3372246)
chr4 (275-316)||(3422144-3422185)
chr4 (275-316)||(6121898-6121939)
chr4 (275-316)||(33621880-33621921)
chr4 (275-316)||(40913194-40913235)
chr4 (275-316)||(41469771-41469812)
chr4 (275-316)||(46797809-46797850)
chr4 (275-316)||(47833695-47833736)
chr4 (275-316)||(47838622-47838663)
chr4 (275-316)||(51894587-51894628)
chr4 (282-314)||(3422073-3422105)
chr4 (276-316)||(5986960-5987000)
chr4 (275-303)||(41116566-41116594)
[»] chr1 (37 HSPs)
chr1 (273-319)||(44955287-44955333)
chr1 (267-319)||(31842876-31842928)
chr1 (273-319)||(1050891-1050937)
chr1 (273-319)||(9981650-9981696)
chr1 (273-319)||(11795936-11795982)
chr1 (273-319)||(12483709-12483755)
chr1 (273-319)||(26471146-26471192)
chr1 (273-319)||(27159439-27159485)
chr1 (273-319)||(39402047-39402093)
chr1 (273-319)||(44668174-44668220)
chr1 (273-319)||(47216780-47216826)
chr1 (267-319)||(23278082-23278134)
chr1 (267-319)||(47777562-47777614)
chr1 (276-319)||(14984843-14984886)
chr1 (273-319)||(34042699-34042745)
chr1 (273-319)||(47588418-47588464)
chr1 (275-316)||(11897059-11897100)
chr1 (275-316)||(11897138-11897179)
chr1 (276-316)||(44955212-44955252)
chr1 (268-303)||(47844531-47844566)
chr1 (273-303)||(47678371-47678401)
chr1 (275-316)||(9981731-9981772)
chr1 (275-316)||(11796017-11796058)
chr1 (277-314)||(12043689-12043726)
chr1 (275-316)||(12483633-12483674)
chr1 (275-316)||(14984921-14984962)
chr1 (275-316)||(16448192-16448233)
chr1 (275-316)||(17556757-17556798)
chr1 (275-316)||(17556837-17556878)
chr1 (275-316)||(25694403-25694444)
chr1 (275-316)||(27159363-27159404)
chr1 (275-316)||(31842800-31842841)
chr1 (278-319)||(37552222-37552263)
chr1 (275-316)||(39401971-39402012)
chr1 (275-316)||(44668098-44668139)
chr1 (275-316)||(47777486-47777527)
chr1 (276-316)||(47969700-47969741)
[»] chr2 (31 HSPs)
chr2 (276-319)||(16243864-16243907)
chr2 (273-319)||(3055561-3055607)
chr2 (273-319)||(4684013-4684059)
chr2 (273-319)||(13197791-13197837)
chr2 (273-319)||(15896845-15896891)
chr2 (273-319)||(16044398-16044444)
chr2 (273-319)||(37666691-37666737)
chr2 (273-319)||(37990094-37990140)
chr2 (273-319)||(41478720-41478766)
chr2 (273-319)||(44397550-44397596)
chr2 (273-319)||(44398689-44398735)
chr2 (273-319)||(12338018-12338064)
chr2 (273-319)||(38917603-38917649)
chr2 (275-319)||(15372231-15372275)
chr2 (273-311)||(6648608-6648646)
chr2 (273-319)||(13344487-13344533)
chr2 (273-319)||(30099263-30099309)
chr2 (275-316)||(41492901-41492942)
chr2 (276-319)||(9047836-9047879)
chr2 (281-319)||(41492977-41493015)
chr2 (275-316)||(3055642-3055683)
chr2 (275-316)||(6648524-6648565)
chr2 (275-316)||(9047760-9047801)
chr2 (275-316)||(12337942-12337983)
chr2 (275-316)||(13197715-13197756)
chr2 (275-316)||(15372310-15372351)
chr2 (275-316)||(15896926-15896967)
chr2 (275-316)||(37990018-37990059)
chr2 (275-316)||(38917527-38917568)
chr2 (275-316)||(41478644-41478685)
chr2 (275-316)||(44398770-44398811)
[»] scaffold0482 (1 HSPs)
scaffold0482 (273-319)||(12863-12909)
[»] scaffold0464 (2 HSPs)
scaffold0464 (273-319)||(6212-6258)
scaffold0464 (275-316)||(6136-6177)
[»] scaffold0204 (2 HSPs)
scaffold0204 (273-319)||(23788-23834)
scaffold0204 (275-316)||(23869-23910)
[»] scaffold0009 (2 HSPs)
scaffold0009 (273-319)||(49508-49554)
scaffold0009 (275-316)||(49589-49630)
[»] chr7 (25 HSPs)
chr7 (273-319)||(1565810-1565856)
chr7 (273-319)||(1738528-1738574)
chr7 (273-319)||(4790251-4790297)
chr7 (273-319)||(7240752-7240798)
chr7 (273-319)||(7482228-7482274)
chr7 (273-319)||(23314220-23314266)
chr7 (273-319)||(28536832-28536878)
chr7 (273-319)||(31319480-31319526)
chr7 (273-319)||(36583398-36583444)
chr7 (273-319)||(38063994-38064040)
chr7 (273-319)||(46840863-46840909)
chr7 (275-319)||(22285704-22285748)
chr7 (275-319)||(36016277-36016321)
chr7 (276-319)||(94399-94442)
chr7 (273-319)||(9268759-9268805)
chr7 (273-319)||(38441463-38441509)
chr7 (275-316)||(1738452-1738493)
chr7 (275-316)||(7240833-7240874)
chr7 (275-316)||(7482309-7482350)
chr7 (275-316)||(9268840-9268881)
chr7 (275-316)||(22285783-22285824)
chr7 (275-316)||(23314144-23314185)
chr7 (275-316)||(38441544-38441585)
chr7 (275-316)||(46840944-46840985)
chr7 (276-316)||(33418460-33418500)
[»] chr5 (26 HSPs)
chr5 (273-319)||(9395353-9395399)
chr5 (273-319)||(37149036-37149082)
chr5 (275-319)||(13033056-13033100)
chr5 (275-319)||(13103029-13103073)
chr5 (273-319)||(582992-583038)
chr5 (273-319)||(11795171-11795217)
chr5 (273-319)||(17025627-17025673)
chr5 (273-319)||(20848077-20848123)
chr5 (273-319)||(23359945-23359991)
chr5 (273-319)||(36563619-36563665)
chr5 (273-319)||(41989488-41989534)
chr5 (279-319)||(4443969-4444009)
chr5 (275-319)||(26350431-26350475)
chr5 (277-314)||(13539949-13539986)
chr5 (273-314)||(37641956-37641997)
chr5 (275-319)||(38361772-38361816)
chr5 (277-316)||(11574046-11574085)
chr5 (273-316)||(23360026-23360069)
chr5 (276-314)||(11574166-11574204)
chr5 (275-316)||(2629628-2629669)
chr5 (275-316)||(6126908-6126949)
chr5 (275-316)||(9395434-9395475)
chr5 (275-316)||(13103108-13103149)
chr5 (275-316)||(17025708-17025749)
chr5 (275-316)||(36563543-36563584)
chr5 (275-316)||(41989412-41989453)
[»] chr3 (42 HSPs)
chr3 (273-319)||(4238597-4238643)
chr3 (273-319)||(10297982-10298028)
chr3 (273-319)||(19557133-19557179)
chr3 (273-319)||(21295407-21295453)
chr3 (273-319)||(22721934-22721980)
chr3 (273-319)||(34080111-34080157)
chr3 (273-319)||(44785477-44785523)
chr3 (273-319)||(49823462-49823508)
chr3 (275-319)||(17653717-17653761)
chr3 (275-319)||(36095761-36095805)
chr3 (275-319)||(37508926-37508970)
chr3 (275-319)||(46208035-46208079)
chr3 (276-319)||(2787913-2787956)
chr3 (273-319)||(8437428-8437474)
chr3 (273-319)||(8817467-8817513)
chr3 (273-319)||(9111575-9111621)
chr3 (273-319)||(38964395-38964441)
chr3 (273-319)||(42170427-42170473)
chr3 (273-319)||(42507436-42507482)
chr3 (273-319)||(48340400-48340446)
chr3 (273-319)||(51406676-51406722)
chr3 (279-319)||(35513482-35513522)
chr3 (276-319)||(40691077-40691120)
chr3 (275-316)||(21295331-21295372)
chr3 (275-316)||(46208114-46208155)
chr3 (275-319)||(6013417-6013461)
chr3 (273-316)||(4238678-4238721)
chr3 (273-316)||(17653796-17653839)
chr3 (273-316)||(37509005-37509048)
chr3 (285-319)||(29285839-29285873)
chr3 (275-316)||(6013341-6013382)
chr3 (275-316)||(9027147-9027188)
chr3 (275-316)||(9111499-9111540)
chr3 (275-316)||(10298063-10298104)
chr3 (275-316)||(19557057-19557098)
chr3 (275-316)||(34080035-34080076)
chr3 (275-316)||(38964476-38964517)
chr3 (275-316)||(40691001-40691042)
chr3 (275-316)||(42507360-42507401)
chr3 (275-316)||(48340481-48340522)
chr3 (275-316)||(49823386-49823427)
chr3 (276-316)||(33128212-33128252)
[»] scaffold1707 (1 HSPs)
scaffold1707 (277-319)||(1342-1384)


Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 67 - 274
Target Start/End: Complemental strand, 32925964 - 32925757
Alignment:
Q  67 aagtatattttatttgcagttatttactaatttacatgcacgagtcaatgttttaatgtatgtaatatgaataatttattttactagtttcaaatttaca 166  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  32925964 aagtatattttatttgcagttatttactaatttacatgtacgagtcaatgtattaatgtatgtaatatgattaatttattttactagtttcaaatttaca 32925865  T
Q  167 taattatatgatttgagctgaagaaataagttgctgaattataataaatttccacctagatattagttactcacgggaaatgttttgattcttgctccat 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  32925864 taattatatgatttgagctgaagaaataagttgctgaattataataaattttcacccagatattagttactcacaggaaatgttttgattcttgctccat 32925765  T
Q  267 ttgtagta 274  Q
    ||||||||    
T  32925764 ttgtagta 32925757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 11658143 - 11658222
Alignment:
Q  194 aagttgctgaattataataaatttccacctagatattagttactcacgggaaatgttttgattcttgctccatttgtagt 273  Q
    |||||| ||||||||||| |||||||||| | ||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  11658143 aagttgttgaattataattaatttccacccacatattagttactcacaggaaatgtcttgattctagctccatttgtagt 11658222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 319
Target Start/End: Complemental strand, 32114607 - 32114556
Alignment:
Q  268 tgtagtacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  32114607 tgtactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 32114556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 54739 - 54693
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  54739 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 54693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 2890289 - 2890243
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  2890289 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 2890243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 3304405 - 3304359
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  3304405 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 3304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 4245708 - 4245662
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  4245708 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 4245662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 6552658 - 6552704
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  6552658 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 6552704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 7785905 - 7785859
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  7785905 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 7785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 7805826 - 7805780
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  7805826 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 7805780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 12343267 - 12343221
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  12343267 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 12343221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 15888479 - 15888433
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  15888479 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 15888433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 43199481 - 43199435
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43199481 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 43199435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 44498314 - 44498268
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44498314 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 44498268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 31654618 - 31654662
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  31654618 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 31654662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 7012174 - 7012220
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  7012174 tacctccggtcctatttataagagaaatttagatcaacaaaagtgaa 7012220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 12763781 - 12763735
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  12763781 tacctccggtcttatttataagagaaatttaggtcaacaaaagtgaa 12763735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 25601127 - 25601081
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  25601127 tacctccgatcctatttataagagaaatttaggtcaacaaaagtgaa 25601081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 32211490 - 32211444
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  32211490 tacctccggtcctatttataagagaaatttaggtcaacaaaaatgaa 32211444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 39571330 - 39571284
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  39571330 tacctccggtcctatttataagagaaatttagatcaacaaaagtgaa 39571284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 33289388 - 33289342
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||    
T  33289388 tacctccggtcctatttataagagaaatttagatcaacataagtgaa 33289342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 2525484 - 2525443
Alignment:
Q  233 ttactcacgggaaatgttttgattcttgctccatttgtagta 274  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  2525484 ttactcacaggaaatgtcttgattcttgctccatttgtagta 2525443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 3304283 - 3304324
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  3304283 cctccggtcctatttataagaaaattttgggtcaacaaaagt 3304324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32925999 - 32925963
Alignment:
Q  1 gtttataaaatatcactattttcaattagtgcctaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32925999 gtttataaaatatcactattttcagttagtgcctaaa 32925963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32926037 - 32926001
Alignment:
Q  1 gtttataaaatatcactattttcaattagtgcctaaa 37  Q
    |||| ||||||||||||||||||||||||||||||||    
T  32926037 gtttctaaaatatcactattttcaattagtgcctaaa 32926001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 28463614 - 28463657
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||||| ||| || |||||||||||||    
T  28463614 tacctccggtcctatttataagagaaagttgggtcaacaaaagt 28463657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 32114480 - 32114519
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaa 314  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  32114480 cctccggtcctatttataagaaaattttgggtcaacaaaa 32114519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Original strand, 6899422 - 6899452
Alignment:
Q  273 tacctccggtcctatttataagaaaaattta 303  Q
    |||||||||||||||||||||||||||||||    
T  6899422 tacctccggtcctatttataagaaaaattta 6899452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 13578860 - 13578906
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||| || |||||||||||| ||||||||||||| |||||||||    
T  13578860 tacctccagttctatttataagagaaatttaggtcaataaaagtgaa 13578906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 24692096 - 24692062
Alignment:
Q  282 tcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||| ||||||||||||||||    
T  24692096 tcctatttataagaaaaagttaggtcaacaaaagt 24692062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 54617 - 54658
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  54617 cctccggtcctatttataagagaattttgggtcaacaaaagt 54658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 2890167 - 2890208
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  2890167 cctccggtcctatttataagagaattttgggtcaacaaaagt 2890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 6552780 - 6552739
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  6552780 cctccggtcctatttataagagaattttgggtcaacaaaagt 6552739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 7785783 - 7785824
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  7785783 cctccggtcctatttataagagaattttgggtcaacaaaagt 7785824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 8587175 - 8587216
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| ||| || |||||||||||||    
T  8587175 cctccggtcctatttataagagaaagtttggtcaacaaaagt 8587216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 12763659 - 12763700
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  12763659 cctccggtcctatttataagataattttgggtcaacaaaagt 12763700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 25601005 - 25601046
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  25601005 cctccggtcctatttataagagaattttgggtcaacaaaagt 25601046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 33289266 - 33289307
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  33289266 cctccggtcctatttataagagaattttgggtcaacaaaagt 33289307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 39571208 - 39571249
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  39571208 cctccggtcctatttataagagaattttgggtcaacaaaagt 39571249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 43199359 - 43199400
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  43199359 cctccggtcctatttataagagaatttttggtcaacaaaagt 43199400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 303
Target Start/End: Original strand, 5031468 - 5031496
Alignment:
Q  275 cctccggtcctatttataagaaaaattta 303  Q
    |||||||||||||||||||||||||||||    
T  5031468 cctccggtcctatttataagaaaaattta 5031496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 12343146 - 12343186
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagt 12343186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 27422311 - 27422271
Alignment:
Q  279 cggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||| |||||| ||||||||||| ||||    
T  27422311 cggtcctatttataagagaaatttgggtcaacaaaaatgaa 27422271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 35031128 - 35031082
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35031128 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 35031082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 2830338 - 2830384
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  2830338 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 2830384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 6068569 - 6068615
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  6068569 tacctccggtcctatttataagaaaaatttaggtcaataaaagtgaa 6068615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 6330118 - 6330164
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  6330118 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 6330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 8099533 - 8099579
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  8099533 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 8099579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 8383096 - 8383050
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  8383096 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 8383050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 11572272 - 11572226
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  11572272 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 11572226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 26602326 - 26602372
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26602326 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 26602372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 33052921 - 33052875
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  33052921 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 33052875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 6143557 - 6143603
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  6143557 tacctccgatcctatttataagagaaatttaggtcaacaaaagtgaa 6143603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 13853720 - 13853674
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  13853720 taccttcggtcctatttataagagaaatttaggtcaacaaaagtgaa 13853674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 9644699 - 9644737
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaaca 311  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9644699 tacctccggtcctatttataagagaaatttaggtcaaca 9644737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 9650716 - 9650754
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaaca 311  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9650716 tacctccggtcctatttataagagaaatttaggtcaaca 9650754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 13043761 - 13043807
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||    
T  13043761 tacctccggttctatttataagagaaatttaggtcaacaaaaatgaa 13043807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 3788162 - 3788121
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  3788162 cctccggtcttatttataagataaatttaggtcaacaaaagt 3788121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 8417918 - 8417874
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||    
T  8417918 cctctggtcttatttataagagaaatttaggtcaacaaaagtgaa 8417874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 2830460 - 2830419
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  2830460 cctccggtcctatttataagagaattttgggtcaacaaaagt 2830419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 6330240 - 6330199
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  6330240 cctccggtcctatttataagagaattttgggtcaacaaaagt 6330199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 8099655 - 8099614
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  8099655 cctccggtcctatttataagagaattttgggtcaacaaaagt 8099614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 8382974 - 8383015
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  8382974 cctccggtcctatttataagagaattttgggtcaacaaaagt 8383015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 9644821 - 9644780
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  9644821 cctccggtcctatttataagagaattttgggtcaacaaaagt 9644780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 9650838 - 9650797
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  9650838 cctccggtcctatttataagagaattttgggtcaacaaaagt 9650797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 11572150 - 11572191
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  11572150 cctccggtcctatttataagagaattttgggtcaacaaaagt 11572191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 13853598 - 13853639
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  13853598 cctccggtcctatttataagagaattttgggtcaacaaaagt 13853639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 26602448 - 26602407
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  26602448 cctccggtcctatttataagagaattttgggtcaacaaaagt 26602407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 22896476 - 22896512
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaaca 311  Q
    ||||||||||||||||||||| || ||||||||||||    
T  22896476 cctccggtcctatttataagagaagtttaggtcaaca 22896512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 51894709 - 51894663
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  51894709 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 51894663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 319
Target Start/End: Complemental strand, 20538818 - 20538767
Alignment:
Q  268 tgtagtacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  20538818 tgtactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 20538767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 3372124 - 3372170
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  3372124 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 3372170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 24704373 - 24704419
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  24704373 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 24704419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 33551204 - 33551250
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  33551204 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 33551250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 47833614 - 47833660
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  47833614 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 47833660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 48336266 - 48336312
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  48336266 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 48336312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 53337373 - 53337419
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  53337373 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 53337419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 3904810 - 3904764
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  3904810 tacctccggtcctatttataaaagaaatttaggtcaacaaaagtgaa 3904764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 3992979 - 3993025
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  3992979 tacctccggtcctatttataagagaaatttcggtcaacaaaagtgaa 3993025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 6122020 - 6121974
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  6122020 tacctccggtcctatttataagagaaatttagatcaacaaaagtgaa 6121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 7579313 - 7579359
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  7579313 tacctccggtcctatttataagagaaatttaggttaacaaaagtgaa 7579359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 315
Target Start/End: Original strand, 26231580 - 26231622
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaag 315  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26231580 tacctccggtcctatttataagagaaatttaggtcaacaaaag 26231622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 42797735 - 42797781
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  42797735 tacctccggtcctatatataagagaaatttaggtcaacaaaagtgaa 42797781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 46797728 - 46797774
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||    
T  46797728 tacctccggttctatttataagagaaatttaggtcaacaaaagtgaa 46797774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 43900554 - 43900595
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  43900554 cctccggtcctatttataagagaaatttaggtcaacaaaagt 43900595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 17236912 - 17236872
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagt 17236872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 40913314 - 40913270
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||    
T  40913314 cctccggtcctatttataagagaaatttagatcaacaaaagtgaa 40913270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 52756681 - 52756724
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  52756681 ctccggtcctatttataagagaaatttaggtcaacataagtgaa 52756724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 47838744 - 47838698
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||    
T  47838744 tacctccgatcctatttataagagaaatttcggtcaacaaaagtgaa 47838698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 4780420 - 4780379
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  4780420 cctccggtcctatttataagagaaattttggtcaacaaaagt 4780379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 42797857 - 42797816
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  42797857 cctccggtcctatttataagagaattttaggtcaacaaaagt 42797816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 48336388 - 48336347
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  48336388 cctccggtcctatttataagaaaattttgggtcaacaaaagt 48336347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 33621805 - 33621845
Alignment:
Q  279 cggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  33621805 cggttctatttataagagaaatttaggtcaacaaaagtgaa 33621845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 41469887 - 41469847
Alignment:
Q  279 cggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  41469887 cggtcctatttataaaagaaatttaggtcaacaaaagtgaa 41469847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 5986879 - 5986925
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||| | |||||||||||| |||| ||||||||||||||||||    
T  5986879 tacctccgattctatttataagagaaatataggtcaacaaaagtgaa 5986925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 314
Target Start/End: Complemental strand, 32822325 - 32822295
Alignment:
Q  284 ctatttataagaaaaatttaggtcaacaaaa 314  Q
    |||||||||||||||||||||||||||||||    
T  32822325 ctatttataagaaaaatttaggtcaacaaaa 32822295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 3372246 - 3372205
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  3372246 cctccggtcctatttataagataattttgggtcaacaaaagt 3372205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 3422185 - 3422144
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  3422185 cctccggtcctatttataagagaattttgggtcaacaaaagt 3422144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 6121898 - 6121939
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  6121898 cctccggtcctatttataagagaattttgggtcaacaaaagt 6121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 33621921 - 33621880
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  33621921 cctccggtcctatttataagataattttgggtcaacaaaagt 33621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 40913194 - 40913235
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| |||||| | |||||||||||    
T  40913194 cctccggtcctatttataagagaaatttggatcaacaaaagt 40913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 41469771 - 41469812
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  41469771 cctccggtcctatttataagagaatttttggtcaacaaaagt 41469812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 46797850 - 46797809
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  46797850 cctccggtcctatttataagagaattttgggtcaacaaaagt 46797809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 47833736 - 47833695
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  47833736 cctccggtcctatttataagagaattttgggtcaacaaaagt 47833695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 47838622 - 47838663
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  47838622 cctccggtcctatttataagagaatttttggtcaacaaaagt 47838663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 51894587 - 51894628
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  51894587 cctccggtcctatttataagagaattttgggtcaacaaaagt 51894628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 314
Target Start/End: Original strand, 3422073 - 3422105
Alignment:
Q  282 tcctatttataagaaaaatttaggtcaacaaaa 314  Q
    |||||||||||||| ||||||||||||||||||    
T  3422073 tcctatttataagagaaatttaggtcaacaaaa 3422105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 5987000 - 5986960
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  5987000 ctccggtcctatttataagagaattttgggtcaacaaaagt 5986960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 303
Target Start/End: Original strand, 41116566 - 41116594
Alignment:
Q  275 cctccggtcctatttataagaaaaattta 303  Q
    |||||||||||||||||||||||||||||    
T  41116566 cctccggtcctatttataagaaaaattta 41116594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 8e-18; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 44955333 - 44955287
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44955333 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 44955287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 31842928 - 31842876
Alignment:
Q  267 ttgtagtacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  31842928 ttgtactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 31842876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 1050891 - 1050937
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1050891 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 1050937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 9981650 - 9981696
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  9981650 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 9981696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 11795936 - 11795982
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  11795936 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 11795982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 12483755 - 12483709
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  12483755 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 12483709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 26471192 - 26471146
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26471192 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 26471146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 27159485 - 27159439
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  27159485 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 27159439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 39402093 - 39402047
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  39402093 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 39402047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 44668220 - 44668174
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44668220 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 44668174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 47216826 - 47216780
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  47216826 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 47216780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 23278134 - 23278082
Alignment:
Q  267 ttgtagtacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  23278134 ttgtactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaa 23278082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 47777614 - 47777562
Alignment:
Q  267 ttgtagtacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||||    
T  47777614 ttgtactacccccggtcctatttataagagaaatttaggtcaacaaaagtgaa 47777562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 14984843 - 14984886
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  14984843 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 14984886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 34042699 - 34042745
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  34042699 tacctccggtcctatttataagagaaatttaggtcaacaaaaatgaa 34042745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 47588464 - 47588418
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||    
T  47588464 tacctctggtcttatttataagagaaatttaggtcaacaaaagtgaa 47588418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 11897059 - 11897100
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  11897059 cctccggtcctatttataagagaaagttaggtcaacaaaagt 11897100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 11897179 - 11897138
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  11897179 cctccggtcctatttataagagaaatttgggtcaacaaaagt 11897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 44955212 - 44955252
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagt 44955252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 303
Target Start/End: Original strand, 47844531 - 47844566
Alignment:
Q  268 tgtagtacctccggtcctatttataagaaaaattta 303  Q
    |||| |||||||||||||||||||||||||||||||    
T  47844531 tgtaatacctccggtcctatttataagaaaaattta 47844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Complemental strand, 47678401 - 47678371
Alignment:
Q  273 tacctccggtcctatttataagaaaaattta 303  Q
    |||||||||||||||||||||||||||||||    
T  47678401 tacctccggtcctatttataagaaaaattta 47678371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 9981772 - 9981731
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  9981772 cctccggtcctatttataagagaattttgggtcaacaaaagt 9981731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 11796058 - 11796017
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  11796058 cctccggtcctatttataagagaattttgggtcaacaaaagt 11796017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 12043726 - 12043689
Alignment:
Q  277 tccggtcctatttataagaaaaatttaggtcaacaaaa 314  Q
    |||||||||||||||||||||||||||  |||||||||    
T  12043726 tccggtcctatttataagaaaaatttaaatcaacaaaa 12043689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 12483633 - 12483674
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  12483633 cctccggtcctatttataagagaattttgggtcaacaaaagt 12483674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 14984962 - 14984921
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  14984962 cctccggtcctatttataagagaattttgggtcaacaaaagt 14984921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 16448233 - 16448192
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| ||| || |||||||||||||    
T  16448233 cctccggtcctatttataagagaaagttgggtcaacaaaagt 16448192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 17556757 - 17556798
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||| |||||||||||||||| ||| ||||||||||||||||    
T  17556757 cctctggtcctatttataagagaaagttaggtcaacaaaagt 17556798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 17556878 - 17556837
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| ||| || |||||||||||||    
T  17556878 cctccggtcctatttataagagaaacttgggtcaacaaaagt 17556837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 25694444 - 25694403
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  25694444 cctccggtcctatttataagagaattttgggtcaacaaaagt 25694403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 27159363 - 27159404
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  27159363 cctccggtcctatttataagagaattttgggtcaacaaaagt 27159404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 31842800 - 31842841
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  31842800 cctccggtcctatttataagagaattttgggtcaacaaaagt 31842841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 37552263 - 37552222
Alignment:
Q  278 ccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||| |||||| ||||||||||| ||||    
T  37552263 ccggtcctatttataagagaaatttgggtcaacaaaaatgaa 37552222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 39401971 - 39402012
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  39401971 cctccggtcctatttataagagaattttgggtcaacaaaagt 39402012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 44668098 - 44668139
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  44668098 cctccggtcctatttataagagaattttgggtcaacaaaagt 44668139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 47777486 - 47777527
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  47777486 cctccggtcctatttataagagaattttgggtcaacaaaagt 47777527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 47969700 - 47969741
Alignment:
Q  276 ctccggtcctatttataa-gaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  47969700 ctccggtcctatttataaagagaaatttaggtcaacaaaagt 47969741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 16243907 - 16243864
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16243907 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 16243864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 3055561 - 3055607
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  3055561 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 3055607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 4684059 - 4684013
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  4684059 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 4684013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 13197837 - 13197791
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  13197837 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 13197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 15896845 - 15896891
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  15896845 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 15896891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 16044444 - 16044398
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  16044444 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 16044398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 37666737 - 37666691
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  37666737 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 37666691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 37990140 - 37990094
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  37990140 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 37990094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 41478766 - 41478720
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  41478766 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 41478720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 44397550 - 44397596
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44397550 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 44397596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 44398689 - 44398735
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44398689 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 44398735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 12338064 - 12338018
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  12338064 tacctccggttctatttataagaaaaatttaggtcaacaaaaatgaa 12338018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 38917649 - 38917603
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  38917649 tacctccggtcctatttataagataaatttaggtcaataaaagtgaa 38917603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 15372231 - 15372275
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  15372231 cctccagtcctatttataagagaaatttaggtcaacaaaagtgaa 15372275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 311
Target Start/End: Complemental strand, 6648646 - 6648608
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaaca 311  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6648646 tacctccggtcctatttataagagaaatttaggtcaaca 6648608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 13344487 - 13344533
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||    
T  13344487 tacctccggttctatttataagagaaatttaggtcaacaaaaatgaa 13344533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 30099309 - 30099263
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||    
T  30099309 tacctccgatcctatttataagagaaatttaggtcaacaaaaatgaa 30099263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 41492901 - 41492942
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  41492901 cctccggtcctatttataagagaaatttgggtcaacaaaagt 41492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 9047879 - 9047836
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||    
T  9047879 ctccggtcatatttataagagaaatttaggtcaaaaaaagtgaa 9047836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 41493015 - 41492977
Alignment:
Q  281 gtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  41493015 gtcctatttataaaagaaatttaggtcaacaaaagtgaa 41492977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 3055683 - 3055642
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  3055683 cctccggtcctatttataagagaattttgggtcaacaaaagt 3055642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 6648524 - 6648565
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  6648524 cctccggtcctatttataagagaattttgggtcaacaaaagt 6648565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 9047760 - 9047801
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  9047760 cctccggtcctatttataagagaattttgggtcaacaaaagt 9047801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 12337942 - 12337983
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  12337942 cctccggtcctatttataagagaattttgggtcaacaaaagt 12337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 13197715 - 13197756
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  13197715 cctccggtcctatttataagagaattttgggtcaacaaaagt 13197756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 15372351 - 15372310
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  15372351 cctccggtcctatttataagagaattttgggtcaacaaaagt 15372310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 15896967 - 15896926
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  15896967 cctccggtcctatttataagagaattttgggtcaacaaaagt 15896926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 37990018 - 37990059
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  37990018 cctccggtcctatttataagagaattttgggtcaacaaaagt 37990059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 38917527 - 38917568
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  38917527 cctccggtcctatttataagagaattttgggtcaacaaaagt 38917568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 41478644 - 41478685
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  41478644 cctccggtcctatttataagagaattttgggtcaacaaaagt 41478685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 44398811 - 44398770
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  44398811 cctccggtcctatttataagagaattttgggtcaacaaaagt 44398770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 12863 - 12909
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  12863 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 12909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 6258 - 6212
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  6258 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 6212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 6136 - 6177
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  6136 cctccggtcctatttataagaaaattttgggtcaacaaaagt 6177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 23788 - 23834
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  23788 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 23834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 23910 - 23869
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  23910 cctccggtcctatttataagaaaattttgggtcaacaaaagt 23869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 49508 - 49554
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  49508 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 49554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 49630 - 49589
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  49630 cctccggtcctatttataagagaattttgggtcaacaaaagt 49589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 1565856 - 1565810
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1565856 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 1565810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 1738574 - 1738528
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1738574 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 1738528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 4790251 - 4790297
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  4790251 tacctccggtcctatttataagaaaaatttaggtcaacaaaaatgaa 4790297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 7240752 - 7240798
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  7240752 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 7240798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 7482228 - 7482274
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  7482228 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 7482274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 23314266 - 23314220
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  23314266 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 23314220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 28536878 - 28536832
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  28536878 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 28536832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 31319526 - 31319480
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  31319526 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 31319480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 36583398 - 36583444
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  36583398 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 36583444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 38064040 - 38063994
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  38064040 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 38063994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 46840863 - 46840909
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  46840863 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 46840909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 22285704 - 22285748
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  22285704 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 22285748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 36016321 - 36016277
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  36016321 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 36016277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 94442 - 94399
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  94442 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 94399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 9268759 - 9268805
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||    
T  9268759 tacctctggtcctatttataagagaaatttaggtcaacaaaagtgaa 9268805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 38441463 - 38441509
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  38441463 tacctccggtcctatttataagagaaatttatgtcaacaaaagtgaa 38441509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 1738452 - 1738493
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  1738452 cctccggtcctatttataagagaattttgggtcaacaaaagt 1738493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 7240874 - 7240833
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  7240874 cctccggtcctatttataagagaattttgggtcaacaaaagt 7240833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 7482350 - 7482309
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  7482350 cctccggtcctatttataagagaattttgggtcaacaaaagt 7482309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 9268881 - 9268840
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  9268881 cctccggtcctatttataagagaattttgggtcaacaaaagt 9268840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 22285824 - 22285783
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  22285824 cctccggtcctatttataagagaattttgggtcaacaaaagt 22285783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 23314144 - 23314185
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  23314144 cctccggtcctatttataagagaattttgggtcaacaaaagt 23314185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 38441585 - 38441544
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  38441585 cctccggtcctatttataagagaattttgggtcaacaaaagt 38441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 46840985 - 46840944
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  46840985 cctccggtcctatttataagagaattttgggtcaacaaaagt 46840944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 33418500 - 33418460
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagt 33418460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 9395353 - 9395399
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  9395353 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 9395399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 37149082 - 37149036
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  37149082 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 37149036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 13033056 - 13033100
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  13033056 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 13033100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 13103029 - 13103073
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  13103029 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 13103073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 582992 - 583038
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  582992 tacctccggtcctatttataagagaaatttaggtcaacataagtgaa 583038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 11795171 - 11795217
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  11795171 tacctccgatcctatttataagagaaatttaggtcaacaaaagtgaa 11795217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 17025627 - 17025673
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17025627 tacctccggtcctatttataagagaaatttaggtccacaaaagtgaa 17025673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 20848077 - 20848123
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  20848077 tacctccggtcctatttataagagaaatttaggtcaataaaagtgaa 20848123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 23359945 - 23359991
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||    
T  23359945 tacctctggtcctatttataagagaaatttaggtcaacaaaagtgaa 23359991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 36563665 - 36563619
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  36563665 tacctccgatcctatttataagagaaatttaggtcaacaaaagtgaa 36563619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 41989534 - 41989488
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  41989534 tacctccggtcctatttgtaagagaaatttaggtcaacaaaagtgaa 41989488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 4443969 - 4444009
Alignment:
Q  279 cggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  4443969 cggtcctatttataagagaaatttaggtcaacaaaagtgaa 4444009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 26350475 - 26350431
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  26350475 cctccgatcctatttataagagaaatttaggtcaacaaaagtgaa 26350431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 13539986 - 13539949
Alignment:
Q  277 tccggtcctatttataagaaaaatttaggtcaacaaaa 314  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  13539986 tccggtcctatttataagagaaatttaggtcaacaaaa 13539949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 37641956 - 37641997
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaa 314  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  37641956 tacctccggtcctatttataagagaaatttaggtcaataaaa 37641997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 38361816 - 38361772
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||| |||||||||||||| ||||||||||||| |||||||||    
T  38361816 cctccgatcctatttataagataaatttaggtcaataaaagtgaa 38361772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 11574046 - 11574085
Alignment:
Q  277 tccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  11574046 tccggtcctatttacaagaaaaatttaggtcaataaaagt 11574085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 23360069 - 23360026
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||||| || ||| |||||||||||||    
T  23360069 tacctccggtcctatttataagagaattttgggtcaacaaaagt 23360026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 11574204 - 11574166
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaa 314  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  11574204 ctccggtcctatttataagagacatttaggtcaacaaaa 11574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 2629669 - 2629628
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||| | ||||||||||| ||||||||||||||||||    
T  2629669 cctccggtcttgtttataagaaatatttaggtcaacaaaagt 2629628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 6126949 - 6126908
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  6126949 cctccggtcctatttataagagaattttgggtcaacaaaagt 6126908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 9395475 - 9395434
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  9395475 cctccggtcctatttataagagaattttgggtcaacaaaagt 9395434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 13103149 - 13103108
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  13103149 cctccggtcctatttataagagaattttgggtcaacaaaagt 13103108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 17025749 - 17025708
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  17025749 cctccggtcctatttataagagaattttgggtcaacaaaagt 17025708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 36563543 - 36563584
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  36563543 cctccggtcctatttataagagaattttgggtcaacaaaagt 36563584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 41989412 - 41989453
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  41989412 cctccggtcctatttataagagaattttgggtcaacaaaagt 41989453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 4238597 - 4238643
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  4238597 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 4238643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 10297982 - 10298028
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  10297982 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 10298028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 19557179 - 19557133
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19557179 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 19557133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 21295453 - 21295407
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  21295453 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 21295407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 22721934 - 22721980
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  22721934 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 22721980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 34080157 - 34080111
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  34080157 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 34080111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 44785523 - 44785477
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44785523 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 44785477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 49823508 - 49823462
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  49823508 tacctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 49823462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 17653717 - 17653761
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  17653717 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 17653761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 36095805 - 36095761
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  36095805 cctccggtcctatttataagataaatttaggtcaacaaaagtgaa 36095761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 37508926 - 37508970
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  37508926 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 37508970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 46208035 - 46208079
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  46208035 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 46208079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 2787956 - 2787913
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  2787956 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaa 2787913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 8437428 - 8437474
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  8437428 tacctccggtcctatttataagagaaatttaggtcaataaaagtgaa 8437474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 8817513 - 8817467
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  8817513 taccttcggtcctatttataagagaaatttaggtcaacaaaagtgaa 8817467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 9111621 - 9111575
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  9111621 taccttcggtcctatttataagagaaatttaggtcaacaaaagtgaa 9111575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 38964395 - 38964441
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  38964395 tacctccggtcctatttataagagaaatttagatcaacaaaagtgaa 38964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 42170473 - 42170427
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  42170473 tacctccggtcttatttataagagaaatttaggtcaacaaaagtgaa 42170427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 42507482 - 42507436
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  42507482 tacctccggtcctatttataatagaaatttaggtcaacaaaagtgaa 42507436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 48340400 - 48340446
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  48340400 tacctccggtcctatttacaagagaaatttaggtcaacaaaagtgaa 48340446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 51406676 - 51406722
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  51406676 tacctccggtcttatttataagagaaatttaggtcaacaaaagtgaa 51406722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 35513482 - 35513522
Alignment:
Q  279 cggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  35513482 cggtcctatttataagagaaatttaggtcaacaaaagtgaa 35513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 40691120 - 40691077
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  40691120 ctccggtcctatttataagagaaatttaggttaacaaaagtgaa 40691077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 21295331 - 21295372
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  21295331 cctccggtcctatttataagagaattttaggtcaacaaaagt 21295372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 46208155 - 46208114
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  46208155 cctccggtcctatttataagagaattttaggtcaacaaaagt 46208114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 6013461 - 6013417
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||| |||| |||||||||| |||||||||||||||||||||||    
T  6013461 cctccagtccaatttataagagaaatttaggtcaacaaaagtgaa 6013417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 4238721 - 4238678
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||||| || ||| |||||||||||||    
T  4238721 tacctccggtcctatttataagagaatttttggtcaacaaaagt 4238678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 17653839 - 17653796
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||||| || ||| |||||||||||||    
T  17653839 tacctccggtcctatttataagagaattttgggtcaacaaaagt 17653796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 37509048 - 37509005
Alignment:
Q  273 tacctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||||| || ||| |||||||||||||    
T  37509048 tacctccggtcctatttataagagaattttgggtcaacaaaagt 37509005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Complemental strand, 29285873 - 29285839
Alignment:
Q  285 tatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||| |||||||||||||||||||||||    
T  29285873 tatttataagataaatttaggtcaacaaaagtgaa 29285839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 6013341 - 6013382
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  6013341 cctccggtcctatttataagagaattttgggtcaacaaaagt 6013382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 9027147 - 9027188
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| ||| || |||||||||||||    
T  9027147 cctccggtcctatttataagataaagttgggtcaacaaaagt 9027188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 9111499 - 9111540
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  9111499 cctccggtcctatttataagagaattttgggtcaacaaaagt 9111540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 10298104 - 10298063
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  10298104 cctccggtcctatttataagagaattttgggtcaacaaaagt 10298063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 19557057 - 19557098
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  19557057 cctccggtcctatttataagagaattttgggtcaacaaaagt 19557098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 34080035 - 34080076
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  34080035 cctccggtcctatttataagagaattttgggtcaacaaaagt 34080076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 38964517 - 38964476
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  38964517 cctccggtcctatttataagagaatttttggtcaacaaaagt 38964476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 40691001 - 40691042
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  40691001 cctccggtcctatttataagagaattttgggtcaacaaaagt 40691042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 42507360 - 42507401
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  42507360 cctccggtcctatttataagagaattttgggtcaacaaaagt 42507401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 48340522 - 48340481
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  48340522 cctccggtcctatttataagagaattttgggtcaacaaaagt 48340481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 49823386 - 49823427
Alignment:
Q  275 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  49823386 cctccggtcctatttataagagaattttgggtcaacaaaagt 49823427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 33128212 - 33128252
Alignment:
Q  276 ctccggtcctatttataagaaaaatttaggtcaacaaaagt 316  Q
    |||| |||||| |||||||| ||||||||||||||||||||    
T  33128212 ctccagtcctaattataagagaaatttaggtcaacaaaagt 33128252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 1342 - 1384
Alignment:
Q  277 tccggtcctatttataagaaaaatttaggtcaacaaaagtgaa 319  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  1342 tccggtcctatttataagagaaatttaggtcaacaaaagtgaa 1384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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