View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14177_low_55 (Length: 300)
Name: NF14177_low_55
Description: NF14177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14177_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 91 - 291
Target Start/End: Original strand, 6001163 - 6001367
Alignment:
| Q |
91 |
ccgagggttttgcaataaaattgtgcgatgttgtaataaaaaataattgtgtgatgttagtagtgtcggctccaattcaacaacaaattga--------- |
181 |
Q |
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| T |
6001163 |
ccgagggttttgcaataaaattgtgc---------ataaaaaataattgtgtgatgttagtagtgtcggctccaattcaacaacaaattgaatacatgtt |
6001253 |
T |
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| Q |
182 |
----catcgctggggcctggaaaaagactagaaaggacaccaatgatcatcaaatactcatcagctaaattctagtaggtctcgttcttgtcataaccac |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6001254 |
tcaacatcgctggggcctggaaaaagactagaaaggacaccaatgatcatcaaatactcatcagctaaattctagtaggtctcgttcttgtcataaccac |
6001353 |
T |
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| Q |
278 |
aaccgtatctgtgc |
291 |
Q |
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|||||||||||||| |
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| T |
6001354 |
aaccgtatctgtgc |
6001367 |
T |
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