View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14178_high_57 (Length: 216)
Name: NF14178_high_57
Description: NF14178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14178_high_57 |
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Alignment Details
Target: chr8 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 11403524 - 11403705
Alignment:
| Q |
13 |
aatatgcataggatcctacttaattagcttcagttatgatcaaaattttgagcacatcatttcctttttctannnnnnnncaaggtgtactcatctatat |
112 |
Q |
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| T |
11403524 |
aatatgcgtaggatcctactta----gctttacttatgatcaaaattttgagcacag-atttcctttttctattttttttcaaggtgtactcatctatat |
11403618 |
T |
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| Q |
113 |
aggctgtacaatatacattttttaagatgattttacttcctatgttagcatatcgaaccatttttctttgttaaatagaatcatctt |
199 |
Q |
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| T |
11403619 |
aggctgtacaatatacattttttaagatgattttacttcctatgttagcatatcgaaccatttttctttgttaaatagaatcatctt |
11403705 |
T |
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