View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14178_low_29 (Length: 354)
Name: NF14178_low_29
Description: NF14178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14178_low_29 |
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Alignment Details
Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 10 - 342
Target Start/End: Complemental strand, 1990295 - 1989963
Alignment:
| Q |
10 |
attatactaataaatttagatacaaannnnnnngacaaaagatataatattctttttatgaatctaatcattgaataatatttatattcttttcacaaga |
109 |
Q |
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| T |
1990295 |
attatactaataaatttagatataatttttttttacaaaagatataatattctttttatgaatctaatcattgaataatatttatattttttccacaaga |
1990196 |
T |
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| Q |
110 |
ataaactataattttatgatcaaataatttcattaattcaaacaataataatttaccacgaaataatttatgtttttgaatatttcaaagtacataaccc |
209 |
Q |
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| T |
1990195 |
ataaactataattttataatcaaataatttcattaattcaaacaataataatttaccaccaaataatttatgtttttgaatatttcaaagtacataaccc |
1990096 |
T |
|
| Q |
210 |
tatttatttgtttatgaattagtagttagtagaatgatgcaatttattctcatcttaaatgaatggactatgatttacatgagtcataatcataacaggt |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1990095 |
tatttatttgtttatgaattagtagttagtagaatgatgcaatttattctcatcttaaatgaatggactatgatttacatgagtcataatcataacaggt |
1989996 |
T |
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| Q |
310 |
atcccacatgcatatgtggccatcatcacctca |
342 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
1989995 |
atcccacatgcatatgtggccatcatcacctca |
1989963 |
T |
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