View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14178_low_36 (Length: 311)

Name: NF14178_low_36
Description: NF14178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14178_low_36
NF14178_low_36
[»] chr3 (9 HSPs)
chr3 (1-246)||(53981707-53981952)
chr3 (2-156)||(33909472-33909629)
chr3 (2-170)||(38300579-38300751)
chr3 (1-78)||(48407590-48407670)
chr3 (10-109)||(31563892-31563994)
chr3 (44-170)||(38300414-38300541)
chr3 (3-60)||(5847182-5847239)
chr3 (185-217)||(10758998-10759030)
chr3 (185-217)||(33909620-33909652)
[»] chr8 (12 HSPs)
chr8 (2-152)||(7621999-7622149)
chr8 (9-138)||(21505089-21505218)
chr8 (2-159)||(3537714-3537870)
chr8 (2-78)||(43984236-43984315)
chr8 (10-78)||(27402335-27402403)
chr8 (42-169)||(7622150-7622277)
chr8 (111-156)||(36994086-36994131)
chr8 (2-51)||(21653593-21653642)
chr8 (100-152)||(7621806-7621858)
chr8 (185-217)||(33435761-33435793)
chr8 (10-106)||(34248189-34248285)
chr8 (185-217)||(36039784-36039816)
[»] chr1 (12 HSPs)
chr1 (4-169)||(19481523-19481691)
chr1 (12-151)||(35892376-35892514)
chr1 (95-170)||(14368888-14368963)
chr1 (100-156)||(35024598-35024654)
chr1 (95-170)||(19481218-19481293)
chr1 (100-170)||(482586-482655)
chr1 (1-78)||(40367690-40367770)
chr1 (8-80)||(35891839-35891910)
chr1 (10-48)||(13356869-13356907)
chr1 (2-36)||(19614116-19614150)
chr1 (63-145)||(38739764-38739848)
chr1 (185-217)||(17419869-17419901)
[»] chr4 (8 HSPs)
chr4 (2-80)||(27048329-27048407)
chr4 (9-109)||(34206147-34206247)
chr4 (116-170)||(34206119-34206173)
chr4 (44-108)||(21497938-21498002)
chr4 (185-217)||(991286-991318)
chr4 (185-217)||(8559961-8559993)
chr4 (185-217)||(10390465-10390497)
chr4 (185-217)||(21646794-21646826)
[»] chr2 (8 HSPs)
chr2 (2-80)||(29923403-29923481)
chr2 (9-146)||(901670-901810)
chr2 (9-80)||(30160137-30160211)
chr2 (100-170)||(10429680-10429748)
chr2 (2-39)||(3185965-3186002)
chr2 (185-217)||(5424772-5424804)
chr2 (185-217)||(6183356-6183388)
chr2 (185-217)||(22447182-22447214)
[»] chr7 (9 HSPs)
chr7 (9-124)||(13788746-13788861)
chr7 (2-156)||(12524940-12525093)
chr7 (2-82)||(43288369-43288449)
chr7 (2-80)||(12524642-12524720)
chr7 (12-81)||(23839002-23839071)
chr7 (100-170)||(14690980-14691050)
chr7 (185-217)||(8585173-8585205)
chr7 (185-217)||(12578450-12578482)
chr7 (185-217)||(23396896-23396928)
[»] chr5 (3 HSPs)
chr5 (2-82)||(4465104-4465184)
chr5 (185-217)||(24125144-24125176)
chr5 (185-217)||(27760457-27760489)
[»] chr6 (5 HSPs)
chr6 (2-80)||(5557187-5557265)
chr6 (185-217)||(15102614-15102646)
chr6 (185-217)||(16590266-16590298)
chr6 (185-217)||(16605082-16605114)
chr6 (185-217)||(17096688-17096720)


Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 53981707 - 53981952
Alignment:
Q  1 aaaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgat 100  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53981707 aaaattttaacatcgtatcagagcctatccaaggtccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgat 53981806  T
Q  101 ggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgatatgctcttagttgctttgagagggtggatttgttaggatgagtt 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  53981807 ggaaatccctccccgagcgtgagggtgtgtgtcggtaatcccacctttattgcgatatgctcctagtttctttgagagggtggatttgtaaggatgagtt 53981906  T
Q  201 agaccccaaatttcaacgatattcaattctaatatttaaaccaaca 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  53981907 agaccccaaatttcaacgatattcaattctaatatttaaaccaaca 53981952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 33909629 - 33909472
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattg---ggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtg 98  Q
    |||||| |||||||||||||| ||||||||||||||||| |||   |||||||||| |||||| |||||||||| |||| || | |||||||||||||||    
T  33909629 aaatttcaacatggtatcagatcctatccaagatccaccgttgtcgggattccgcattgccacgcttcatgcccgttggatctgagtgcgagggagtgtg 33909530  T
Q  99 atggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgat 156  Q
     |||||||||  ||||||| |||||||  ||||| |||||||||||||||||||||||    
T  33909529 ttggaaatcctcccccaagtgtgaggggatgtgttggtaatcccacctttattgcgat 33909472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 38300751 - 38300579
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattg---ggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtg 98  Q
    |||||| ||||||||||||||||||||||| |||| ||| |||   |||||||||| |||||| || |||||||||| |||| | ||| ||||| |||||    
T  38300751 aaatttcaacatggtatcagagcctatccaggatctaccgttgtcgggattccgcattgccacgctacatgcccattaggtctgagtgtgagggtgtgtg 38300652  T
Q  99 atggaaatccctccccaagcgtgagggtgtgtg-tcggtaatcccacctttattgcgatatgctcttagttgc 170  Q
     |||||||| | |||| |  ||||||| ||||| | |||||  ||||||| |||||||| ||| | |||||||    
T  38300651 ttggaaatctcgccccgaaagtgagggggtgtgtttggtaagaccaccttaattgcgatctgcccctagttgc 38300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48407590 - 48407670
Alignment:
Q  1 aaaattttaacatggtatcagagcctatccaagatccaccatt---gggattccgcaatgccacacttcatgcccattggg 78  Q
    ||||||| ||||||||||||||||||||||| |||| ||| ||   ||||||||||| |||||| ||||||||||||||||    
T  48407590 aaaatttcaacatggtatcagagcctatccaggatctaccgttgtcgggattccgcattgccacgcttcatgcccattggg 48407670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 31563994 - 31563892
Alignment:
Q  10 acatggtatcagagcctatccaagatccaccatt---gggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaat 106  Q
    ||||||||||||||||||||||||||| ||| ||   ||||||||||| |||||| || |||| |||||||||| | |   ||||| ||||| |||||||    
T  31563994 acatggtatcagagcctatccaagatctaccgttgtcgggattccgcattgccacgctacatgtccattgggtctgagcatgagggggtgtgttggaaat 31563895  T
Q  107 ccc 109  Q
    |||    
T  31563894 ccc 31563892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 38300541 - 38300414
Alignment:
Q  44 gggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaatccctccccaagcgtgagggtgtgtg-tcggtaatccc 142  Q
    ||||||||||| |||||| || |||||||||| |||| | | | ||||| ||||| |||||||| | |||| |  ||||||| ||||| | |||||  ||    
T  38300541 gggattccgcattgccacgctacatgcccattaggtctgagcgtgagggggtgtgttggaaatctcgccccgaaagtgagggggtgtgtttggtaagacc 38300442  T
Q  143 acctttattgcgatatgctcttagttgc 170  Q
    ||||| |||||||| ||| |||||||||    
T  38300441 accttaattgcgatctgcccttagttgc 38300414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 5847182 - 5847239
Alignment:
Q  3 aattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgcca 60  Q
    |||||||||| |||||||||||||| |||||||  ||| ||||||||| ||| |||||    
T  5847182 aattttaacacggtatcagagcctacccaagatataccgttgggattctgcattgcca 5847239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 10759030 - 10758998
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  10759030 tttgtaaggatgagttagaccccaaatttcaac 10758998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 33909652 - 33909620
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  33909652 tttgtaaggatgagttagaccccaaatttcaac 33909620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 7621999 - 7622149
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatg 101  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||||||||| |||||| |||||||||||||||||  | ||| ||||| ||||| ||    
T  7621999 aaatttcaacatggtatcagagcctatccaagatctacccttgggattccgcattgccacgcttcatgcccattgggtaagagtgtgagggggtgtgttg 7622098  T
Q  102 gaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattg 152  Q
    |||||||| |||||| |||||||| |||||| |||||||||||||| ||||    
T  7622099 gaaatcccgccccaaacgtgagggggtgtgttggtaatcccaccttcattg 7622149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 21505218 - 21505089
Alignment:
Q  9 aacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaatcc 108  Q
    |||||||||||||||||||| ||||||||||  || |||||| ||| ||||||||||||||||||||||||||| | | ||||| ||||  |||||||||    
T  21505218 aacatggtatcagagcctattcaagatccactgttcggattcagcattgccacacttcatgcccattgggtccgagcgtgagggggtgttttggaaatcc 21505119  T
Q  109 ctccccaagcgtgagggtgtgtgtcggtaa 138  Q
    | |||| ||||| |||| |||||| |||||    
T  21505118 cgccccgagcgttagggggtgtgttggtaa 21505089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 3537714 - 3537870
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatg 101  Q
    |||||| ||| | |||||||||||||||  ||||| ||| |||  |||||| | |||||| ||||||||||||||||||   |   ||||| ||||| ||    
T  3537714 aaatttcaacgtagtatcagagcctatctgagatctaccgttgaaattccgtactgccacgcttcatgcccattgggtcttagcatgagggtgtgtgttg 3537813  T
Q  102 gaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgatatg 159  Q
    |||||| | ||| |||| ||||||| ||||| |||||||||| ||| |||| ||||||    
T  3537814 gaaatctcgccctaagcatgagggt-tgtgttggtaatcccatcttaattgtgatatg 3537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 43984315 - 43984236
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccatt---gggattccgcaatgccacacttcatgcccattggg 78  Q
    |||||| ||||||||||||||||||||||| |||| | | ||   ||||||||||| |||||| ||||||||||||||||    
T  43984315 aaatttcaacatggtatcagagcctatccaggatctaacgttgtcgggattccgcattgccacgcttcatgcccattggg 43984236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 27402403 - 27402335
Alignment:
Q  10 acatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattggg 78  Q
    ||||||||  ||||||||||||||||| ||| ||||||||||||| |||||| ||||  ||||||||||    
T  27402403 acatggtactagagcctatccaagatctaccgttgggattccgcattgccacgcttctggcccattggg 27402335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 7622150 - 7622277
Alignment:
Q  42 ttgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaatccctccccaagcgtgagggtgtgtgtcggtaatcc 141  Q
    ||||||| | ||| |||||  ||||||||||||||||   | ||| ||||  ||||| |||||||||| |||| | |||||||| ||| || ||||||||    
T  7622150 ttgggatcctgcattgccatgcttcatgcccattgggctagagtgtgaggaggtgtgttggaaatcccgccccgaacgtgagggggtgcgttggtaatcc 7622249  T
Q  142 cacctttattgcgatatgctcttagttg 169  Q
    |||||| |||| ||||| | ||||||||    
T  7622250 caccttcattgtgatattcccttagttg 7622277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 36994131 - 36994086
Alignment:
Q  111 ccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgat 156  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||    
T  36994131 ccccgagcgtgagggggtgtgtcggtaatcccacctttgttgcgat 36994086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 21653593 - 21653642
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattcc 51  Q
    |||||| |||||||||||||||||||||| ||||| | ||||||| ||||    
T  21653593 aaatttcaacatggtatcagagcctatcctagatctatcattgggcttcc 21653642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 7621806 - 7621858
Alignment:
Q  100 tggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattg 152  Q
    |||||| ||| ||||||||||||||| ||| || |||||||||||||| ||||    
T  7621806 tggaaaacccgccccaagcgtgagggggtgcgttggtaatcccaccttaattg 7621858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 33435761 - 33435793
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  33435761 tttgtaaggatgagttagaccccaaatttcaac 33435793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 34248189 - 34248285
Alignment:
Q  10 acatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaat 106  Q
    ||||||||||| ||||||||||||||| ||  || |||||| ||| |||||| ||||  |||||||| | ||  ||| ||||| ||||| |||||||    
T  34248189 acatggtatcatagcctatccaagatctactgtttggattctgcattgccacgcttctggcccattgagcccaagtgtgagggggtgtgttggaaat 34248285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 36039816 - 36039784
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  36039816 tttgtaaggatgagttagaccccaaatttcaac 36039784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 19481691 - 19481523
Alignment:
Q  4 attttaacatggtatcagagcctatccaagatccaccatt---gggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgat 100  Q
    |||| ||||||||| |||||||||||||||||| ||||||   ||||||||||| |||||| || ||||||||||||||| | | | ||||| ||||| |    
T  19481691 atttcaacatggtaccagagcctatccaagatctaccattttcgggattccgcattgccacgctccatgcccattgggtctgagcgtgagggggtgtgtt 19481592  T
Q  101 ggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgatatgctcttagttg 169  Q
    ||||| ||  |||| ||||||||||||||||| ||||||| |||||| |||||||| ||| | ||||||    
T  19481591 ggaaaccctgccccgagcgtgagggtgtgtgttggtaatctcaccttaattgcgatctgcccctagttg 19481523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 35892376 - 35892514
Alignment:
Q  12 atggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaatccctc 111  Q
    |||||||||||| |||||||||||| ||  ||||||||||||| ||||||||||||||||||||||| ||| | | ||||   |||| |||||||||| |    
T  35892376 atggtatcagagtctatccaagatctactgttgggattccgcattgccacacttcatgcccattggg-ccgagcgtgaggagttgtgttggaaatcccgc 35892474  T
Q  112 cccaagcgtgagggtgtgtgtcggtaatcccacctttatt 151  Q
    ||| |||||||| | |||||| |||||||| || ||||||    
T  35892475 cccgagcgtgagagggtgtgttggtaatcctacatttatt 35892514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 14368963 - 14368888
Alignment:
Q  95 tgtgatggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgatatgctcttagttgc 170  Q
    |||| |||||||||||||||||| ||||||| |||||| |||||||||||||| |||||||| |||||| ||||||    
T  14368963 tgtgttggaaatccctccccaagagtgagggggtgtgttggtaatcccaccttaattgcgatctgctctcagttgc 14368888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 35024654 - 35024598
Alignment:
Q  100 tggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgat 156  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  35024654 tggaaatcccaccccaagcgtgagggggtgtgttggtaatcccacctttattgcgat 35024598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 19481218 - 19481293
Alignment:
Q  95 tgtgatggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgatatgctcttagttgc 170  Q
    |||| |||||||||| |||| || ||||||| |||||| |||||||||||||| |||||||| ||| | |||||||    
T  19481218 tgtgttggaaatcccgccccgagtgtgagggggtgtgttggtaatcccaccttaattgcgatctgcccctagttgc 19481293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 482586 - 482655
Alignment:
Q  100 tggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgatatgctcttagttgc 170  Q
    |||||||||| |||| |||||||||| |||||| |||||||||||||| |||||||| ||| | |||||||    
T  482586 tggaaatcccgccccgagcgtgagggggtgtgt-ggtaatcccaccttgattgcgatctgcccctagttgc 482655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40367690 - 40367770
Alignment:
Q  1 aaaattttaacatggtatcagagcctatccaagatccaccattg---ggattccgcaatgccacacttcatgcccattggg 78  Q
    ||||||| ||||||||||| ||||||||||| |||| ||| |||   |||||||||| |||||| ||||||||| ||||||    
T  40367690 aaaatttcaacatggtatctgagcctatccaggatctaccgttgtcaggattccgcattgccacgcttcatgccgattggg 40367770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 35891839 - 35891910
Alignment:
Q  8 taacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtc 80  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||  || |||||| ||||||||||||| ||||    
T  35891839 taacatggtatcagagcttatccaagatctaccatt-agattcttcattgccacgcttcatgcccatttggtc 35891910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 13356907 - 13356869
Alignment:
Q  10 acatggtatcagagcctatccaagatccaccattgggat 48  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  13356907 acatggtatcagagcctatccaagatacaccgttgggat 13356869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 19614116 - 19614150
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatc 36  Q
    ||||||||||||||||||||||||||||| |||||    
T  19614116 aaattttaacatggtatcagagcctatcctagatc 19614150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 38739764 - 38739848
Alignment:
Q  63 cttcatgcccattgggtccgtgtgcgagggagtgtgatggaaatccctcccca--agcgtgagggtgtgtgtcggtaatcccacc 145  Q
    |||||||||||||||||| | | | ||||| ||||  |||||||||| ||||   |||||||||| |||||| ||||||||||||    
T  38739764 cttcatgcccattgggtctgagcgtgagggggtgtattggaaatcccaccccccgagcgtgagggggtgtgttggtaatcccacc 38739848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 17419869 - 17419901
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  17419869 tttgtaaggatgagttagaccccaaatttcaac 17419901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 27048407 - 27048329
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtc 80  Q
    |||||| |||||||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||||||||||||    
T  27048407 aaatttcaacatggtatcagagcctatccaagatctaccgttaggattccgcattgccacacttcatgcccattgggtc 27048329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 34206247 - 34206147
Alignment:
Q  9 aacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaatcc 108  Q
    |||||||||||||||||||||||||||| | | ||||||||||||| |||||   ||||||||| ||||||||| | | ||||| ||||| ||| |||||    
T  34206247 aacatggtatcagagcctatccaagatctatcgttgggattccgcattgccagggttcatgcccgttgggtccgagcgtgagggggtgtgttggtaatcc 34206148  T
Q  109 c 109  Q
    |    
T  34206147 c 34206147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 34206173 - 34206119
Alignment:
Q  116 agcgtgagggtgtgtgtcggtaatcccacctttattgcgatatgctcttagttgc 170  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||| | |||||||    
T  34206173 agcgtgagggggtgtgttggtaatcccacctttattgcgatctgcccctagttgc 34206119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 21498002 - 21497938
Alignment:
Q  44 gggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaatcc 108  Q
    ||||||||||| |||||| |||||||||||||||| ||| | | ||||| ||||| |||||||||    
T  21498002 gggattccgcattgccacgcttcatgcccattgggcccgagcgtgagggggtgtgttggaaatcc 21497938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 991286 - 991318
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  991286 tttgtaaggatgagttagaccccaaatttcaac 991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 8559993 - 8559961
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  8559993 tttgtaaggatgagttagaccccaaatttcaac 8559961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 10390497 - 10390465
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  10390497 tttgtaaggatgagttagaccccaaatttcaac 10390465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 21646826 - 21646794
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  21646826 tttgtaaggatgagttagaccccaaatttcaac 21646794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 29923403 - 29923481
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtc 80  Q
    |||||| |||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||||| ||||||||||||    
T  29923403 aaatttcaacatggtatcagagcctatccaagatctaccgtcgggattccgcattgccacacttcaggcccattgggtc 29923481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 901670 - 901810
Alignment:
Q  9 aacatggtatcagagcctatccaagatccaccattg---ggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaa 105  Q
    ||||||||||||||||||||||| |||| ||| |||   |||||||||| |||||| |||||||||||| ||| | | | | ||||| ||||| ||||||    
T  901670 aacatggtatcagagcctatccaggatctaccgttgttgggattccgcattgccacgcttcatgcccatcgggcctgagcgtgagggggtgtgttggaaa 901769  T
Q  106 tccctccccaagcgtgagggtgtgtgtcggtaatcccacct 146  Q
    |||| |||||| |||||||| ||| || |||||| ||||||    
T  901770 tcccgccccaaacgtgagggggtgggttggtaattccacct 901810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 30160137 - 30160211
Alignment:
Q  9 aacatggtatcagagcctatccaagatccaccattg---ggattccgcaatgccacacttcatgcccattgggtc 80  Q
    |||||||||||||||||||||||||||| ||| |||   |||||||||| |||||| ||||||||||||||||||    
T  30160137 aacatggtatcagagcctatccaagatctaccgttgtcgggattccgcattgccacgcttcatgcccattgggtc 30160211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 10429680 - 10429748
Alignment:
Q  100 tggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgatatgctcttagttgc 170  Q
    |||||||||| ||||  |||||||||||||||| |||||||||||||| |||||||| ||| | |||||||    
T  10429680 tggaaatcccacccc--gcgtgagggtgtgtgttggtaatcccaccttaattgcgatctgcccctagttgc 10429748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 3185965 - 3186002
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccac 39  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  3185965 aaattttaagatggtatcagagcctatccaaaatccac 3186002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 5424804 - 5424772
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  5424804 tttgtaaggatgagttagaccccaaatttcaac 5424772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 6183388 - 6183356
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  6183388 tttgtaaggatgagttagaccccaaatttcaac 6183356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 22447182 - 22447214
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  22447182 tttgtaaggatgagttagaccccaaatttcaac 22447214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 8e-21; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 13788861 - 13788746
Alignment:
Q  9 aacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaatcc 108  Q
    |||||||||| ||||||||||||||||| ||| ||| ||||||||| ||| || |||||||||||||||||| | | | ||||| ||||| |||||||||    
T  13788861 aacatggtattagagcctatccaagatctaccgttgcgattccgcattgcgacgcttcatgcccattgggtctgagcgtgagggtgtgtgttggaaatcc 13788762  T
Q  109 ctccccaagcgtgagg 124  Q
    | |||| ||| |||||    
T  13788761 cgccccgagcatgagg 13788746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 12524940 - 12525093
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatg 101  Q
    |||||| |||||||||||| || |||| ||||||| ||| ||||||||||||| |||||||||||||| |||||||||| | | | | ||| ||||| |     
T  12524940 aaatttcaacatggtatcatagtctatacaagatctaccgttgggattccgcattgccacacttcatgtccattgggtctgagcgtg-gggggtgtgtta 12525038  T
Q  102 gaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgat 156  Q
    |||||| | |||| ||||| |||| |||||   ||||||||||||| ||||||||    
T  12525039 gaaatctcgccccgagcgtaagggggtgtgctagtaatcccaccttaattgcgat 12525093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 43288369 - 43288449
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccg 82  Q
    |||||| ||||||| ||||||||| |||||||||| ||| ||||||||||||| |||  | ||||||||||||||||||||    
T  43288369 aaatttgaacatggcatcagagcccatccaagatctaccgttgggattccgcattgctgcgcttcatgcccattgggtccg 43288449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 12524642 - 12524720
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtc 80  Q
    |||||| ||||||||||||||| ||||||| |||| ||| |||||||||| || | |||| |||||| |||||||||||    
T  12524642 aaatttcaacatggtatcagagactatccatgatctaccgttgggattccacatttccacgcttcattcccattgggtc 12524720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 23839071 - 23839002
Alignment:
Q  12 atggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtcc 81  Q
    ||||||||||||||||||||||| | |||||||||||||| || |||||  ||||| ||| |||||||||    
T  23839071 atggtatcagagcctatccaagacctaccattgggattccacattgccatgcttcaggcctattgggtcc 23839002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 14690980 - 14691050
Alignment:
Q  100 tggaaatccctccccaagcgtgagggtgtgtgtcggtaatcccacctttattgcgatatgctcttagttgc 170  Q
    ||||||||||||||| ||| |||||| |||||| |||||||| ||||| |||||||| ||| | |||||||    
T  14690980 tggaaatccctccccgagcatgagggggtgtgttggtaatcctaccttaattgcgatctgcccctagttgc 14691050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 8585173 - 8585205
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  8585173 tttgtaaggatgagttagaccccaaatttcaac 8585205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 12578482 - 12578450
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  12578482 tttgtaaggatgagttagaccccaaatttcaac 12578450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 23396896 - 23396928
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  23396896 tttgtaaggatgagttagaccccaaatttcaac 23396928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 4465184 - 4465104
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtccg 82  Q
    |||||| ||||||||||||||| |||||||||||  ||| |||||||||||||  ||||| |||| |||||||||||||||    
T  4465184 aaatttcaacatggtatcagagtctatccaagatttaccgttgggattccgcatcgccacgcttcgtgcccattgggtccg 4465104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 24125144 - 24125176
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  24125144 tttgtaaggatgagttagaccccaaatttcaac 24125176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 27760457 - 27760489
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  27760457 tttgtaaggatgagttagaccccaaatttcaac 27760489  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 5557187 - 5557265
Alignment:
Q  2 aaattttaacatggtatcagagcctatccaagatccaccattgggattccgcaatgccacacttcatgcccattgggtc 80  Q
    |||||| |||||| ||| ||| | ||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  5557187 aaatttcaacatgatattagaacttattcaagatccaccgttgggattccgcaatgccacgcttcaagcccattgggtc 5557265  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 15102646 - 15102614
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  15102646 tttgtaaggatgagttagaccccaaatttcaac 15102614  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 16590266 - 16590298
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  16590266 tttgtaaggatgagttagaccccaaatttcaac 16590298  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 16605114 - 16605082
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  16605114 tttgtaaggatgagttagaccccaaatttcaac 16605082  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 17096720 - 17096688
Alignment:
Q  185 tttgttaggatgagttagaccccaaatttcaac 217  Q
    ||||| |||||||||||||||||||||||||||    
T  17096720 tttgtaaggatgagttagaccccaaatttcaac 17096688  T

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