View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14178_low_49 (Length: 243)
Name: NF14178_low_49
Description: NF14178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14178_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 17106548 - 17106759
Alignment:
| Q |
19 |
tttcgaactaaactcgatgggaatttgctgatgaaattaaacaatagtttgatttccatcaatgctgttgttgaatatgctgagcagcagcagatcagaa |
118 |
Q |
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| T |
17106548 |
tttcgaactaaactcgatgggaatttgctgatgaaattaaacaatagtttgatttccatcaatgctgttgttgaatatgctgagcagcagcagatcagaa |
17106647 |
T |
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| Q |
119 |
gatctactgtgaggacatggatttgtaatgtcaaagatgctataatggatgctgaggatgttcttgatgaaatctacatacagaatttgaagtccaagct |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17106648 |
gatctactgtgaggacatggatttgtaatgtcaaagatgctataatggatgctgaggatgttcttgatgaaatctacatacagaatttgaagtccaagct |
17106747 |
T |
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| Q |
219 |
tccttttacttc |
230 |
Q |
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| T |
17106748 |
tccttttacttc |
17106759 |
T |
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