View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14179_low_2 (Length: 288)

Name: NF14179_low_2
Description: NF14179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14179_low_2
NF14179_low_2
[»] chr7 (1 HSPs)
chr7 (15-111)||(13438830-13438926)


Alignment Details
Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 13438830 - 13438926
Alignment:
15 caaaggttccaatgcgtttattctttttccttaacttggggtctggatatttcgctattttcagaggcgctccaaattctaaatcaccaacttcaat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
13438830 caaaggttccaatgcgtttattctttttccttaacttggggtctggatatttcgctattttcagaggcgcttcaaattctaaatcaccaacttcaat 13438926  T

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