View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14180_high_4 (Length: 302)
Name: NF14180_high_4
Description: NF14180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14180_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 15 - 288
Target Start/End: Original strand, 40126473 - 40126749
Alignment:
| Q |
15 |
atgtgaagctctgcactctatagcggcgattaaacatagggtgagcctttgtttttcggtttcattgtcaagattcgaactaccctggttcctgataaag |
114 |
Q |
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| T |
40126473 |
atgtgaagctctgcactctatagcggcgattaaacatagggtgagcctttgcttttcggtttcattgtcaagattcgaactaccctggttcctgataaag |
40126572 |
T |
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| Q |
115 |
tattcctgtgtaacatatgatacattgacatcaatactccaattaaagacagggtaaactttaatacaaatggtattaattggtgcattacatgttttct |
214 |
Q |
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| T |
40126573 |
tattcctgtgtaacatatgatacattgacatcaatactccaattaaagacagggtaaactttaatacaaatggtattaattggtgcattacatgttttct |
40126672 |
T |
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| Q |
215 |
ataaaataatacatgagattctctgcttgtgttgttcagcaataatatatagtg---tgctatgatgatgaattaat |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
40126673 |
ataaaataatacatgagattctctgcttgtgttgttcagcaataatatatagtgtgctgctatgatgatgaattaat |
40126749 |
T |
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