View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14181_low_15 (Length: 237)
Name: NF14181_low_15
Description: NF14181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14181_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 39956259 - 39956038
Alignment:
| Q |
1 |
aactgcaaaggttgcaccgattgcaaagagaacaccaccaaaactccatgaaagaaggaaatgcatgaagccaaaacttgagattgttaaaccaaattta |
100 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39956259 |
aactgcaaaggttgcaccgattacaaagagaacaccaccaaaactccatgaaagaaggaaatgcatgaagccaaaacttgagattgttaaaccaaattta |
39956160 |
T |
|
| Q |
101 |
caatatcacaaacaaccaggtgcatcaccttcttctaagtcaagaaattctagctttccttcaagtcctgtatcaggtagtggaagttctagtcttcttc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39956159 |
caatatcacaaacaaccaggtgcatcaccttcctctaagtcaagaaattctagctttccttcaagtcctgtatcaggtagtggaagttctagtcttcttc |
39956060 |
T |
|
| Q |
201 |
caagccctaccacaccttcaac |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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| T |
39956059 |
caagccctaccacaccttcaac |
39956038 |
T |
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