View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14181_low_18 (Length: 225)
Name: NF14181_low_18
Description: NF14181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14181_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 3128405 - 3128583
Alignment:
| Q |
23 |
aagtggtacggaaggggagatatatggttgcagtgtacatacctgtgagggcttgtaaggtattttcaatatcacggcaagccataacagcttcaacagc |
122 |
Q |
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| T |
3128405 |
aagtggtacggaaggggagatatatggttgcagtgtacatacctgtgagggcttgtaaggtattttcaatatcacggcaagccataacagcttcaacagc |
3128504 |
T |
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| Q |
123 |
atgaactctgacatgttgctgaagttgttctttgaatgtacacaaaactatcaaatattgtgcctgcaccaaacaacca |
201 |
Q |
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| T |
3128505 |
atgaactctgacatgttgctgaagttgttctttgaatgtacacaaaactatcaaatattgtgcctgcaccaaacaacca |
3128583 |
T |
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