View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14184_high_10 (Length: 351)
Name: NF14184_high_10
Description: NF14184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14184_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 27 - 342
Target Start/End: Original strand, 23984944 - 23985260
Alignment:
| Q |
27 |
catgacataaatttttgcaaggtcggtctataagaaagtgagatttaaaataacattctatctcatataatgtaaaaatttagttttttactattgcaaa |
126 |
Q |
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|||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||| ||| ||| |
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| T |
23984944 |
catgccataaagttttgcaaggtcggtctataagaaagtgagatttaaaataatattctatctcatatcatgtgaaaagttagttttttactgttggaaa |
23985043 |
T |
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| Q |
127 |
gtggcacgtcgtatatggtcagggtttaatcctcgattcatctaaaaacattattgaaggttaaaagtaaa-gttattttacacaattactattatatag |
225 |
Q |
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| T |
23985044 |
gtggcacgtcgtacgtggtcagggtttaatcctcgattcatctaaaaaaattattgaaggtcaaaagtaaatattattttacacaattactattatataa |
23985143 |
T |
|
| Q |
226 |
ttttctctttatcttttgcgggggtgggttggagaaactaaaactcaccatcaagagtcagagtgaatgagttccaatttctccgacctaacgcaaggat |
325 |
Q |
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||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
23985144 |
ttttctctttatcttttgcggggaagggttggagaaactagaactcaccatcaagagtcagagtgaatgagttccaatttctctgacctaacgcaaggat |
23985243 |
T |
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| Q |
326 |
gatcactatatattctt |
342 |
Q |
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||||||||||| ||||| |
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| T |
23985244 |
gatcactatattttctt |
23985260 |
T |
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