View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14184_low_16 (Length: 241)
Name: NF14184_low_16
Description: NF14184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14184_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 52844341 - 52844133
Alignment:
| Q |
16 |
ttctccaaataccctatctgcttccaacaaatcatctataaaatatgagtaggaattcaaaaaacaaaatgcttcaaaatctatcaatcatattaatatt |
115 |
Q |
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| T |
52844341 |
ttctccaaataccctatctgcttccaacaaatcatcgataaaatatgagtaggaattcaaaaaacaaaatgcttcaaaatctatcaatcatattaatatt |
52844242 |
T |
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| Q |
116 |
catgtaaccatgtgatttgactcaagtagttaatgagattcacgaaacaatgaaaatgttcggggattccaagtttgattcgtgagttgaacaatattcg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52844241 |
catgtaaccatgtgatttgactcaagtagttaatgagattcacgaaacaatgaaaatgttcggggattccaagtttgattcgtgagttgaacaatattcg |
52844142 |
T |
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| Q |
216 |
gtcatgttt |
224 |
Q |
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||||||||| |
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| T |
52844141 |
gtcatgttt |
52844133 |
T |
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