View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14186_high_3 (Length: 465)
Name: NF14186_high_3
Description: NF14186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14186_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 13 - 448
Target Start/End: Complemental strand, 33792302 - 33791877
Alignment:
| Q |
13 |
agagatgaaggtaaggtttattaggcttttcagcttgccagttaataaacatgtaacattagaggtaatgttaaatgtggttgatgaggtgaaggatggg |
112 |
Q |
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| T |
33792302 |
agagttgaaggaaaggtttattaggcttttcagcttgccagttaataaacatgtaacataa------atgttaaatgtggttgatgaggtgaaggatgga |
33792209 |
T |
|
| Q |
113 |
gttggagaagaatccttttttgatgggaggaggtgttaacggaggagattaaaaatttgctgactaatatttcttttaataatgttgagattgataacgc |
212 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
33792208 |
gttggagaagaatcctttttcgatgggaggaggtgttaacggaggagattagaaatttgctgactaatatttctttcaataatgttgagattgataacgc |
33792109 |
T |
|
| Q |
213 |
aaatctgtaacttaagtaatgactttaaaattttagaaggtcttttgacgtgtgccagaannnnnnnnnnnnnnnnnnnataataacattgagaatcttt |
312 |
Q |
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||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
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| T |
33792108 |
aaacctgtaacttaagtaatgattttaaaattttagaaggtcttttgacgtgtgcgagaa-----aaatgtttctttttataataacattgagaatcttt |
33792014 |
T |
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| Q |
313 |
tccgtattatatttcttatttgtttggcttttt-nnnnnnntactccaaattttaacatagaattgaacactccatattatcattcacacttctaattaa |
411 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33792013 |
tccgtattatatttcttatttgtttggctttttaaaaaaaatactccaaattttaacatagaattgaacactccatattatcattcacacttctaattaa |
33791914 |
T |
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| Q |
412 |
attaagtagaatgtaatatttgaataaatccaagtaa |
448 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
33791913 |
attaagtagaatgtaatatttgaataaatccaagtaa |
33791877 |
T |
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