View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14186_high_6 (Length: 332)
Name: NF14186_high_6
Description: NF14186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14186_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 314
Target Start/End: Original strand, 18997918 - 18998212
Alignment:
| Q |
16 |
aatatggcaaaacatagagccgattttgaaaatgtgggtttcatcacaccaccctatttgaagaaaaagaaacaaaaattatcagtaattcatatttcca |
115 |
Q |
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| T |
18997918 |
aatatggcaaaacatagagccgattttgaaaatgtgggtttcatcacaccaccctatttgaagaaagagaaacaaaaattatcagtaattcatatttcca |
18998017 |
T |
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| Q |
116 |
tacactaattcttgaagaatcatttgcaaagaaatcgtcataaataaatatatatgaaaagtagattctacaatttgatatatgattaggaagctaaagt |
215 |
Q |
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| T |
18998018 |
tacactaattcttgaagaatcatttgcaaagaaatcgtcataaataaatatatatgaaaagtagattctacaatttgatatatgattaggaagctaaagt |
18998117 |
T |
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| Q |
216 |
gagtgagttactgattaattaatagatgaacagattagaggaaatcaattttatttcagagtgtaaattgattttcgaaaacaaaaagagccattaatt |
314 |
Q |
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| T |
18998118 |
gagtgagttactg----attaatagatgaacaaattagaggaaatcaattttatttcagagtttaaattgattttcgaaaactaaaagagccattaatt |
18998212 |
T |
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