View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14188_low_5 (Length: 460)

Name: NF14188_low_5
Description: NF14188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14188_low_5
NF14188_low_5
[»] chr5 (14 HSPs)
chr5 (21-285)||(38180544-38180808)
chr5 (21-285)||(38190323-38190587)
chr5 (21-285)||(38207768-38208032)
chr5 (21-285)||(38217548-38217812)
chr5 (21-285)||(38455904-38456168)
chr5 (24-285)||(26033448-26033709)
chr5 (24-269)||(38447013-38447258)
chr5 (342-436)||(38180888-38180982)
chr5 (342-436)||(38190149-38190243)
chr5 (342-436)||(38208112-38208206)
chr5 (342-436)||(38217374-38217468)
chr5 (342-436)||(38456248-38456342)
chr5 (366-443)||(26033247-26033324)
chr5 (367-443)||(38447447-38447523)
[»] chr4 (2 HSPs)
chr4 (31-284)||(53351852-53352110)
chr4 (376-438)||(53351367-53351429)
[»] chr1 (4 HSPs)
chr1 (42-277)||(38342328-38342563)
chr1 (42-277)||(38446521-38446756)
chr1 (376-427)||(38342739-38342790)
chr1 (376-427)||(38446932-38446983)
[»] chr6 (1 HSPs)
chr6 (385-426)||(4121643-4121684)


Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-140; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 21 - 285
Target Start/End: Original strand, 38180544 - 38180808
Alignment:
Q  21 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcaaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38180544 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaacatggaaccagaaattggaacgaggtatcaaaa 38180643  T
Q  121 aatgctgggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaa 220  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38180644 aatgcggggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaat 38180743  T
Q  221 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38180744 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 38180808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 21 - 285
Target Start/End: Complemental strand, 38190587 - 38190323
Alignment:
Q  21 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcaaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38190587 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaacatggaaccagaaattggaacgaggtatcaaaa 38190488  T
Q  121 aatgctgggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaa 220  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38190487 aatgcggggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaat 38190388  T
Q  221 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38190387 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 38190323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 21 - 285
Target Start/End: Original strand, 38207768 - 38208032
Alignment:
Q  21 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcaaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38207768 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaacatggaaccagaaattggaacgaggtatcaaaa 38207867  T
Q  121 aatgctgggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaa 220  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38207868 aatgcggggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaat 38207967  T
Q  221 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38207968 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 38208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 21 - 285
Target Start/End: Complemental strand, 38217812 - 38217548
Alignment:
Q  21 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcaaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38217812 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaacatggaaccagaaattggaacgaggtatcaaaa 38217713  T
Q  121 aatgctgggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaa 220  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38217712 aatgcggggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaat 38217613  T
Q  221 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38217612 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 38217548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 21 - 285
Target Start/End: Original strand, 38455904 - 38456168
Alignment:
Q  21 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcaaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38455904 gaccgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaacatggaaccagaaattggaacgaggtatcaaaa 38456003  T
Q  121 aatgctgggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaa 220  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38456004 aatgcggggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaat 38456103  T
Q  221 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38456104 ctaaagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 38456168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 24 - 285
Target Start/End: Complemental strand, 26033709 - 26033448
Alignment:
Q  24 cgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcaaaaaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26033709 cgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcgaaaaat 26033610  T
Q  124 gctgggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaacta 223  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |    
T  26033609 gccgggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctgcaaccagatgtgaaaaagggtccatttagtgaagaagaagaaacaa 26033510  T
Q  224 aagtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggta 285  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  26033509 aagtttttgtgttctataaaaagtatggtgaattcaaatggtctaagctggctgaggaggta 26033448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 24 - 269
Target Start/End: Original strand, 38447013 - 38447258
Alignment:
Q  24 cgatactaaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcaaaaaat 123  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||     
T  38447013 cgatactaaaaaaggaaaatggtcaaaagaagaggatgaaatattaaaagcatatgtggaaaaacatggaaccagaaattgggacgaggtatcaaagaac 38447112  T
Q  124 gctgggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaacta 223  Q
     | || |||  ||  | ||| | |||||| ||| | |||||||||||| |||||  ||| | ||| |||||||||||||||||| |||||||| ||| ||    
T  38447113 acaggacttgcacacttcggaagaagttgccgttttagatggtataataacctaagacctggtgtaaaaaagggtccatttagtaaagaagaagaaaata 38447212  T
Q  224 aagtttttgagttctatataaagtatggtgaattcaaatggtctaa 269  Q
    |||| ||| ||||   ||  |||| ||||| |||||||||||||||    
T  38447213 aagtctttcagttacgtaagaagtttggtggattcaaatggtctaa 38447258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 342 - 436
Target Start/End: Original strand, 38180888 - 38180982
Alignment:
Q  342 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38180888 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 38180982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 342 - 436
Target Start/End: Complemental strand, 38190243 - 38190149
Alignment:
Q  342 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38190243 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 38190149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 342 - 436
Target Start/End: Original strand, 38208112 - 38208206
Alignment:
Q  342 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38208112 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 38208206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 342 - 436
Target Start/End: Complemental strand, 38217468 - 38217374
Alignment:
Q  342 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38217468 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 38217374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 342 - 436
Target Start/End: Original strand, 38456248 - 38456342
Alignment:
Q  342 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38456248 gttgatcatgtcattaatttgtattcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagc 38456342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 26033324 - 26033247
Alignment:
Q  366 tcagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagcgtggctt 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  26033324 tcagttaccgggaagaagcgataatgacatcaagaacttttggaacgcgagaaaaagaaaacttgaaaggcgtggctt 26033247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 367 - 443
Target Start/End: Original strand, 38447447 - 38447523
Alignment:
Q  367 cagttaccgggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagcgtggctt 443  Q
    ||||| || ||||||| |||||||||||||||||||||||||||||||||||| ||||||| | ||||| |||||||    
T  38447447 cagttgcctggaagaaccgataatgacatcaagaacttttggaatgcgagaaagagaaaacataaaaagtgtggctt 38447523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 4e-82; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 31 - 284
Target Start/End: Complemental strand, 53352110 - 53351852
Alignment:
Q  31 aaaaaaggaacatggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaa-----cgaggtatcaaaaaatgc 125  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||     ||||||||||| ||||||    
T  53352110 aaaaaaggaaaatggtcaaaagaagaggatgaaatgttaaaagcatatgtggaaaaacatggaaccagaaattggaatggaacgaggtatcaagaaatgc 53352011  T
Q  126 tgggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaactaaa 225  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| || |||||||||||||||||||| |||    
T  53352010 ggggcttatacgttgcggtaaaagttgtcgtctaagatggtataatcaccttcgaccagatgtgaagaaggggccgtttagtgaagaagaaaaaaccaaa 53351911  T
Q  226 gtttttgagttctatataaagtatggtgaattcaaatggtctaagctggctcatgaggt 284  Q
    || |||  ||||| ||  || | |||||||||||||||||||||||||||||| |||||    
T  53351910 gtctttcggttctttaacaactttggtgaattcaaatggtctaagctggctcaagaggt 53351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 376 - 438
Target Start/End: Complemental strand, 53351429 - 53351367
Alignment:
Q  376 ggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaacttgaaaagcgt 438  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  53351429 ggaagaagcgataatgacatcaagaatttttggaatgcaagaaaaagaaaacttgaaaagcgt 53351367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 277
Target Start/End: Original strand, 38342328 - 38342563
Alignment:
Q  42 atggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcaaaaaatgctgggcttatacgttgc 141  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||| ||  | || |||  ||  ||     
T  38342328 atggtcaaaagaagaggatgaaatattaaaagcatatgttgaaaaacatggaaccggaaattggaaagaggtatcaaagaacacgggacttgcacactgt 38342427  T
Q  142 ggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaactaaagtttttgagttctata 241  Q
    || || ||||| ||| | ||||||||||||   |||| ||| ||| | | |||||||||||||||  |||||||| ||   ||| | |||||||| | |     
T  38342428 ggaaacagttgccgttttagatggtataatactctacgacctgatttaagaaagggtccatttagcaaagaagaagaagaaaaattctttgagttatttt 38342527  T
Q  242 taaagtatggtgaattcaaatggtctaagctggctc 277  Q
      |||| |||||| ||||||||||||||| ||||||    
T  38342528 ctaagtttggtgagttcaaatggtctaagatggctc 38342563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 277
Target Start/End: Original strand, 38446521 - 38446756
Alignment:
Q  42 atggtcaaaagaagaagatgaaatattaaaagcatatgtggaaaaccatggaaccagaaattggaacgaggtatcaaaaaatgctgggcttatacgttgc 141  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||| ||  | || |||  ||  ||     
T  38446521 atggtcaaaagaagaggatgaaatattaaaagcatatgttgaaaaacatggaaccggaaattggaaagaggtatcaaagaacacgggacttgcacactgt 38446620  T
Q  142 ggtaaaagttgtcgtctaagatggtataatcacctacaaccagatgtgaaaaagggtccatttagtgaagaagaaaaaactaaagtttttgagttctata 241  Q
    || || ||||| ||| | ||||||||||||   |||| ||| ||| | | |||||||||||||||  |||||||| ||   ||| | |||||||| | |     
T  38446621 ggaaacagttgccgttttagatggtataatactctacgacctgatttaagaaagggtccatttagcaaagaagaagaagaaaaattctttgagttatttt 38446720  T
Q  242 taaagtatggtgaattcaaatggtctaagctggctc 277  Q
      |||| |||||| ||||||||||||||| ||||||    
T  38446721 ctaagtttggtgagttcaaatggtctaagatggctc 38446756  T

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Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 427
Target Start/End: Original strand, 38342739 - 38342790
Alignment:
Q  376 ggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaac 427  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  38342739 ggaagaaccgataatgacatcaagaacttttggaacgcaagaaaaagaaaac 38342790  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 427
Target Start/End: Original strand, 38446932 - 38446983
Alignment:
Q  376 ggaagaagcgataatgacatcaagaacttttggaatgcgagaaaaagaaaac 427  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  38446932 ggaagaaccgataatgacatcaagaacttttggaacgcaagaaaaagaaaac 38446983  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 4121643 - 4121684
Alignment:
Q  385 gataatgacatcaagaacttttggaatgcgagaaaaagaaaa 426  Q
    |||||||  |||||||||||||||||||| ||||||||||||    
T  4121643 gataatgctatcaagaacttttggaatgcaagaaaaagaaaa 4121684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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